NZ_CP094061602002..798084

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 196083 bp
Accession: NZ_CP094061        Location: 602002..798084         Organism: Helicobacter pylori strain Hpfe120       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MPG58_RS02870 (MPG58_02870) 597532..598599 + 1068 WP_245012109.1 phospholipase A -
MPG58_RS02875 (MPG58_02875) 598657..599781 + 1125 WP_021301675.1 DNA polymerase III subunit beta -
MPG58_RS02880 (MPG58_02880) 599793..602114 + 2322 WP_245012110.1 DNA topoisomerase (ATP-hydrolyzing) subunit B -
MPG58_RS02885 (MPG58_02885) 602157..603149 + 993 WP_245012219.1 adenine methyltransferase -
MPG58_RS02890 (MPG58_02890) 603136..603891 + 756 WP_245012111.1 R.Pab1 family restriction endonuclease -
MPG58_RS02895 (MPG58_02895) 604093..605304 + 1212 WP_245012112.1 peptidoglycan DD-metalloendopeptidase Csd1 -
MPG58_RS02900 (MPG58_02900) 605304..605942 + 639 WP_245012113.1 NUDIX hydrolase -
MPG58_RS02905 (MPG58_02905) 605953..606984 + 1032 Protein_553 plasminogen-binding N-terminal domain-containing protein -
MPG58_RS02910 (MPG58_02910) 607001..608380 + 1380 WP_245012115.1 glycolate oxidase subunit GlcD -
MPG58_RS02915 (MPG58_02915) 608403..609167 + 765 WP_245012116.1 4-hydroxy-tetrahydrodipicolinate reductase -
MPG58_RS02920 (MPG58_02920) 609495..609698 + 204 WP_245012117.1 urease-enhancing factor -
MPG58_RS02925 (MPG58_02925) 609911..611356 - 1446 WP_000261553.1 type I glutamate--ammonia ligase -
MPG58_RS02930 (MPG58_02930) 611494..613545 + 2052 WP_245012118.1 DUF262 and DUF1524 domain-containing protein -
MPG58_RS02935 (MPG58_02935) 613608..614057 + 450 WP_024116357.1 50S ribosomal protein L9 -
MPG58_RS02940 (MPG58_02940) 614061..614603 + 543 WP_000461051.1 ATP-dependent protease subunit HslV -
MPG58_RS02945 (MPG58_02945) 614603..615934 + 1332 WP_245012119.1 HslU--HslV peptidase ATPase subunit -
MPG58_RS02950 (MPG58_02950) 615934..616839 + 906 WP_245012120.1 GTPase Era -
MPG58_RS02955 (MPG58_02955) 616836..617828 + 993 WP_245012121.1 hypothetical protein VF
MPG58_RS02960 (MPG58_02960) 617895..618769 - 875 Protein_564 tetratricopeptide repeat protein -
MPG58_RS02965 (MPG58_02965) 618880..619227 + 348 WP_245012122.1 hypothetical protein VF
MPG58_RS02970 (MPG58_02970) 619455..620900 + 1446 WP_245012123.1 hypothetical protein VF
MPG58_RS02975 (MPG58_02975) 620910..621419 + 510 WP_245012124.1 hypothetical protein VF
MPG58_RS02980 (MPG58_02980) 621727..623973 - 2247 WP_245012125.1 Protein VirD4 VF
MPG58_RS02985 (MPG58_02985) 623982..624974 - 993 WP_000133871.1 Type IV secretion system protein VirB11 VF
MPG58_RS02990 (MPG58_02990) 624979..625578 - 600 WP_024116365.1 hypothetical protein VF
MPG58_RS02995 (MPG58_02995) 625715..630901 - 5187 WP_245012126.1 Type IV secretion system protein virB10 VF
MPG58_RS03000 (MPG58_03000) 630916..632481 - 1566 WP_000433990.1 hypothetical protein VF
MPG58_RS03005 (MPG58_03005) 632534..634141 - 1608 WP_015642694.1 hypothetical protein VF
MPG58_RS03010 (MPG58_03010) 634146..634904 - 759 WP_096470009.1 hypothetical protein VF
MPG58_RS03015 (MPG58_03015) 635174..635821 + 648 WP_245012127.1 hypothetical protein VF
MPG58_RS03020 (MPG58_03020) 635837..636679 + 843 WP_050850357.1 CAG pathogenicity island protein 12 VF
MPG58_RS03025 (MPG58_03025) 636881..637480 - 600 WP_000069570.1 CAG pathogenicity island protein 13 VF
MPG58_RS03030 (MPG58_03030) 637997..638148 - 152 Protein_578 CCA tRNA nucleotidyltransferase -
MPG58_RS03035 (MPG58_03035) 638262..638451 + 190 Protein_579 hypothetical protein -
MPG58_RS03040 (MPG58_03040) 638388..638768 + 381 WP_245012128.1 hypothetical protein VF
MPG58_RS03045 (MPG58_03045) 639634..639978 - 345 WP_245012129.1 hypothetical protein VF
MPG58_RS03050 (MPG58_03050) 640405..641535 + 1131 WP_245012130.1 hypothetical protein VF
MPG58_RS03055 (MPG58_03055) 641550..642470 + 921 WP_245012131.1 hypothetical protein VF
MPG58_RS03060 (MPG58_03060) 642552..643265 - 714 WP_245012132.1 hypothetical protein VF
MPG58_RS03065 (MPG58_03065) 643262..644407 - 1146 WP_245012133.1 hypothetical protein VF
MPG58_RS03070 (MPG58_03070) 644418..645362 - 945 WP_033633386.1 hypothetical protein VF
MPG58_RS03075 (MPG58_03075) 645349..645546 + 198 WP_245012134.1 hypothetical protein VF
MPG58_RS03080 (MPG58_03080) 645532..645963 - 432 WP_120878871.1 hypothetical protein VF
MPG58_RS03085 (MPG58_03085) 646018..646824 - 807 WP_245012135.1 hypothetical protein VF
MPG58_RS03090 (MPG58_03090) 646826..649777 - 2952 WP_245012136.1 Type IV secretion system protein virB4 VF
MPG58_RS03095 (MPG58_03095) 649786..650409 - 624 WP_245012137.1 hypothetical protein VF
MPG58_RS03100 (MPG58_03100) 650411..650755 - 345 WP_245012138.1 hypothetical protein VF
MPG58_RS03105 (MPG58_03105) 650924..651151 - 228 WP_000428886.1 cag pathogenicity island protein B -
MPG58_RS03110 (MPG58_03110) 651406..654933 + 3528 WP_245012139.1 Cytotoxicity-associated immunodominant antigen VF
MPG58_RS03115 (MPG58_03115) 655005..655259 - 255 Protein_595 zinc ribbon domain-containing protein -
MPG58_RS03120 (MPG58_03120) 655410..656177 - 768 WP_245012140.1 glutamate racemase -
MPG58_RS03125 (MPG58_03125) 656214..657530 - 1317 WP_001004683.1 transcription termination factor Rho -
MPG58_RS03130 (MPG58_03130) 657796..657999 + 204 WP_000715278.1 50S ribosomal protein L31 -
MPG58_RS03135 (MPG58_03135) 658024..658887 + 864 WP_245012141.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
MPG58_RS03140 (MPG58_03140) 658900..659583 + 684 WP_180412714.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB -
MPG58_RS03145 (MPG58_03145) 659596..660570 + 975 WP_245012142.1 sialidase -
MPG58_RS03150 (MPG58_03150) 660567..661388 + 822 WP_000792841.1 hypothetical protein -
MPG58_RS03155 (MPG58_03155) 661459..661896 - 438 WP_245012143.1 hypothetical protein -
MPG58_RS03160 (MPG58_03160) 662356..663294 - 939 WP_001029386.1 acetyl-CoA carboxylase carboxyl transferase subunit alpha -
MPG58_RS03165 (MPG58_03165) 663317..664555 - 1239 WP_280635538.1 3-oxoacyl-[acyl-carrier-protein] synthase 2 VF
MPG58_RS03170 (MPG58_03170) 664846..665082 - 237 WP_001163099.1 Acyl carrier protein VF
MPG58_RS03175 (MPG58_03175) 665313..666056 - 744 WP_245012144.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
MPG58_RS03180 (MPG58_03180) 666097..666309 - 213 WP_001117775.1 30S ribosomal protein S21 -
MPG58_RS03185 (MPG58_03185) 666411..667661 - 1251 WP_000996926.1 hypothetical protein -
MPG58_RS03190 (MPG58_03190) 667834..668079 + 246 WP_245012145.1 ribbon-helix-helix domain-containing protein -
MPG58_RS03195 (MPG58_03195) 668103..668750 - 648 WP_050852217.1 YkgB family protein -
MPG58_RS03200 (MPG58_03200) 668841..669662 - 822 WP_245012146.1 diaminopimelate epimerase -
MPG58_RS03205 (MPG58_03205) 669778..670824 + 1047 WP_180449654.1 AI-2E family transporter -
MPG58_RS03210 (MPG58_03210) 670892..671764 - 873 WP_245012147.1 radical SAM/SPASM domain-containing protein -
MPG58_RS03215 (MPG58_03215) 671798..672898 - 1101 WP_220949950.1 redox-regulated ATPase YchF -
MPG58_RS03220 (MPG58_03220) 672900..674390 - 1491 WP_245012148.1 leucyl aminopeptidase -
MPG58_RS03225 (MPG58_03225) 674438..675016 - 579 WP_140447670.1 DedA family protein -
MPG58_RS03230 (MPG58_03230) 675031..675570 - 540 WP_001006143.1 adenine phosphoribosyltransferase -
MPG58_RS03235 (MPG58_03235) 675628..675960 - 333 WP_000495088.1 hypothetical protein -
MPG58_RS03240 (MPG58_03240) 676013..676468 - 456 WP_245012149.1 ribose 5-phosphate isomerase B -
MPG58_RS03245 (MPG58_03245) 676489..677187 - 699 WP_245012150.1 site-2 protease family protein -
MPG58_RS03250 (MPG58_03250) 677196..678068 - 873 WP_245012151.1 signal peptidase I -
MPG58_RS03255 (MPG58_03255) 678068..678940 - 873 WP_245012221.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD -
MPG58_RS03260 (MPG58_03260) 679019..681046 - 2028 WP_245012152.1 LTA synthase family protein -
MPG58_RS03265 (MPG58_03265) 681052..681603 - 552 WP_245012153.1 hypothetical protein -
MPG58_RS03270 (MPG58_03270) 681610..682728 - 1119 WP_245012154.1 exo-alpha-sialidase -
MPG58_RS03275 (MPG58_03275) 682704..683723 - 1020 WP_245012155.1 dihydroorotase -
MPG58_RS03280 (MPG58_03280) 683727..684671 - 945 WP_245012156.1 energy transducer TonB -
MPG58_RS03285 (MPG58_03285) 684655..685530 - 876 WP_245012157.1 hypothetical protein -
MPG58_RS03290 (MPG58_03290) 685527..685898 - 372 WP_000004853.1 Flagellar motor switch protein FliN VF
MPG58_RS03295 (MPG58_03295) 685980..686630 - 651 WP_195835910.1 endonuclease III -
MPG58_RS03300 (MPG58_03300) 686633..686863 - 231 WP_000174137.1 ferrous iron transport protein A -
MPG58_RS03305 (MPG58_03305) 686860..689799 - 2940 WP_245012158.1 DUF3971 domain-containing protein -
MPG58_RS03310 (MPG58_03310) 689717..690706 + 990 WP_245012159.1 endolytic transglycosylase MltG -
MPG58_RS03315 (MPG58_03315) 690890..691231 + 342 WP_001096903.1 4Fe-4S dicluster domain-containing protein -
MPG58_RS03320 (MPG58_03320) 691231..692358 + 1128 WP_021308022.1 2-oxoglutarate synthase subunit alpha -
MPG58_RS03325 (MPG58_03325) 692360..693181 + 822 WP_126131067.1 2-oxoglutarate ferredoxin oxidoreductase subunit beta -
MPG58_RS03330 (MPG58_03330) 693181..693735 + 555 WP_000388023.1 2-oxoacid:acceptor oxidoreductase family protein -
MPG58_RS03335 (MPG58_03335) 693845..695623 + 1779 WP_245012160.1 hypothetical protein VF
MPG58_RS03340 (MPG58_03340) 695766..695930 + 165 WP_057112790.1 hypothetical protein -
MPG58_RS03345 (MPG58_03345) 695939..697408 + 1470 WP_245012161.1 disulfide bond formation protein B -
MPG58_RS03355 (MPG58_03355) 697883..698461 + 579 WP_245012162.1 tumor necrosis factor alpha-inducing protein -
MPG58_RS03360 (MPG58_03360) 698464..700443 - 1980 WP_245012163.1 transglycosylase domain-containing protein -
MPG58_RS03365 (MPG58_03365) 700444..701565 - 1122 WP_245012164.1 8-amino-7-oxononanoate synthase 2 VF
MPG58_RS03370 (MPG58_03370) 701588..702889 - 1302 WP_017280481.1 Methyl-accepting chemotaxis protein McpU VF
MPG58_RS03375 (MPG58_03375) 702961..704505 - 1545 WP_245012222.1 Lipid A export ATP-binding/permease protein MsbA VF
MPG58_RS03380 (MPG58_03380) 704905..706437 + 1533 WP_245012165.1 Flagellin A VF
MPG58_RS03385 (MPG58_03385) 706551..707207 + 657 WP_180472549.1 3-methyladenine DNA glycosylase -
MPG58_RS03390 (MPG58_03390) 707204..707821 + 618 WP_245012166.1 hypothetical protein -
MPG58_RS03395 (MPG58_03395) 707890..708909 + 1020 WP_245012167.1 uroporphyrinogen decarboxylase -
MPG58_RS03400 (MPG58_03400) 708934..710367 + 1434 WP_245012223.1 efflux RND transporter outer membrane subunit HefA -
MPG58_RS03405 (MPG58_03405) 710378..711082 + 705 WP_245012168.1 efflux RND transporter periplasmic adaptor subunit HefB -
MPG58_RS03410 (MPG58_03410) 711095..714175 + 3081 WP_245012169.1 efflux RND transporter permease subunit HefC -
MPG58_RS03415 (MPG58_03415) 714172..714741 + 570 WP_120857934.1 outer membrane beta-barrel protein -
MPG58_RS03420 (MPG58_03420) 714903..724463 + 9561 WP_245012170.1 vacuolating cytotoxin domain-containing protein -
MPG58_RS03425 (MPG58_03425) 724523..725278 - 756 WP_220867721.1 ABC transporter permease -
MPG58_RS03430 (MPG58_03430) 725278..725977 - 700 Protein_657 ABC transporter ATP-binding protein -
MPG58_RS03435 (MPG58_03435) 726326..726658 - 333 WP_245012171.1 ribbon-helix-helix domain-containing protein -
MPG58_RS03440 (MPG58_03440) 726759..728729 - 1971 WP_245012172.1 NAD-dependent DNA ligase LigA -
MPG58_RS03445 (MPG58_03445) 728807..729748 + 942 WP_000251456.1 Chemotaxis protein CheV VF
MPG58_RS03450 (MPG58_03450) 729783..731516 + 1734 WP_245012173.1 aspartate--tRNA ligase -
MPG58_RS03455 (MPG58_03455) 731533..732108 + 576 WP_245012174.1 adenylate kinase -
MPG58_RS03460 (MPG58_03460) 732134..733132 + 999 WP_245012175.1 hypothetical protein VF
MPG58_RS03465 (MPG58_03465) 733429..734504 + 1076 Protein_664 Tyrosine recombinase XerH ; Integrase Integrase
MPG58_RS03470 (MPG58_03470) 734568..735770 - 1203 Protein_665 hypothetical protein -
MPG58_RS03475 (MPG58_03475) 735806..737155 - 1350 Protein_666 hypothetical protein -
MPG58_RS03480 (MPG58_03480) 737159..739375 - 2217 WP_245012176.1 competence protein -
MPG58_RS03485 (MPG58_03485) 739396..740790 - 1395 WP_245012177.1 hypothetical protein -
MPG58_RS03490 (MPG58_03490) 740791..741828 - 1038 WP_245012178.1 hypothetical protein -
MPG58_RS03495 (MPG58_03495) 741977..749898 + 7922 Protein_670 SNF2-related protein -
MPG58_RS03500 (MPG58_03500) 750164..750818 + 655 Protein_671 ParA family protein -
MPG58_RS03505 (MPG58_03505) 750900..751184 + 285 WP_000394639.1 hypothetical protein ; Integrase Integrase
MPG58_RS03510 (MPG58_03510) 751216..752377 + 1162 Protein_673 hypothetical protein -
MPG58_RS03515 (MPG58_03515) 752401..754312 - 1912 Protein_674 relaxase/mobilization nuclease domain-containing protein -
MPG58_RS03520 (MPG58_03520) 754607..754921 + 315 WP_033123190.1 hypothetical protein Antitoxin Detail
MPG58_RS03525 (MPG58_03525) 754914..755195 + 282 WP_001917619.1 YafQ family addiction module toxin Toxin Detail
MPG58_RS03530 (MPG58_03530) 755520..757252 - 1733 Protein_677 Conjugal transfer protein TraG VF
MPG58_RS03535 (MPG58_03535) 757253..757810 - 558 WP_245012179.1 hypothetical protein -
MPG58_RS03540 (MPG58_03540) 757811..758101 - 291 WP_245012180.1 hypothetical protein -
MPG58_RS03545 (MPG58_03545) 758098..758553 - 456 WP_245012181.1 mobilization protein -
MPG58_RS03550 (MPG58_03550) 758550..759491 - 942 WP_245012182.1 Type IV secretion system protein VirB11 VF
MPG58_RS03555 (MPG58_03555) 759491..759790 - 300 WP_245012183.1 hypothetical protein -
MPG58_RS03560 (MPG58_03560) 759787..760050 - 264 WP_245012184.1 hypothetical protein -
MPG58_RS03565 (MPG58_03565) 760043..760336 - 294 WP_000671327.1 hypothetical protein -
MPG58_RS03570 (MPG58_03570) 760406..761640 - 1235 Protein_685 Type IV secretion system protein virB10 VF
MPG58_RS03575 (MPG58_03575) 761637..763178 - 1542 WP_245012185.1 hypothetical protein VF
MPG58_RS03580 (MPG58_03580) 763178..764164 - 987 WP_245012186.1 hypothetical protein VF
MPG58_RS07705 764166..764294 - 129 WP_001185489.1 hypothetical protein -
MPG58_RS03585 (MPG58_03585) 764294..766228 - 1935 WP_245012224.1 type IA DNA topoisomerase -
MPG58_RS03590 (MPG58_03590) 766221..768719 - 2499 Protein_690 Type IV secretion system protein PtlC VF
MPG58_RS03595 (MPG58_03595) 768732..768992 - 261 WP_000602756.1 hypothetical protein -
MPG58_RS03600 (MPG58_03600) 768993..769295 - 303 WP_245012187.1 TrbC/VirB2 family protein -
MPG58_RS03605 (MPG58_03605) 769285..771202 - 1918 Protein_693 hypothetical protein -
MPG58_RS03610 (MPG58_03610) 771212..771976 - 765 WP_245012188.1 hypothetical protein -
MPG58_RS03615 (MPG58_03615) 772084..772647 + 564 WP_245012189.1 hypothetical protein VF
MPG58_RS03620 (MPG58_03620) 772592..773416 + 825 WP_245012190.1 Alpha-(1,3)-fucosyltransferase FucT VF
MPG58_RS03625 (MPG58_03625) 773472..773993 + 522 WP_001047362.1 inorganic diphosphatase -
MPG58_RS03630 (MPG58_03630) 774135..776384 - 2250 WP_245012191.1 endonuclease MutS2 -
MPG58_RS03635 (MPG58_03635) 776403..776768 - 366 WP_000501487.1 hypothetical protein -
MPG58_RS03640 (MPG58_03640) 776768..778117 - 1350 WP_245012192.1 UDP-N-acetylmuramate--L-alanine ligase -
MPG58_RS03645 (MPG58_03645) 778110..779237 - 1128 WP_245012193.1 succinyldiaminopimelate transaminase -
MPG58_RS03650 (MPG58_03650) 779392..780471 + 1080 WP_245012194.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
MPG58_RS03655 (MPG58_03655) 780474..781679 + 1206 WP_000608618.1 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase -
MPG58_RS03660 (MPG58_03660) 781691..782749 + 1059 WP_245012195.1 Putative beta-lactamase HcpD VF
MPG58_RS03665 (MPG58_03665) 782872..784920 + 2049 WP_245012196.1 DUF262 domain-containing protein -
MPG58_RS03670 (MPG58_03670) 784968..785552 - 585 WP_245012197.1 NAD(P)H-dependent oxidoreductase -
MPG58_RS03675 (MPG58_03675) 785690..786844 + 1155 WP_024948434.1 hydrogenase 1 small subunit -
MPG58_RS03680 (MPG58_03680) 786861..788597 + 1737 WP_245012198.1 nickel-dependent hydrogenase large subunit -
MPG58_RS03685 (MPG58_03685) 788610..789284 + 675 WP_245012199.1 Ni/Fe-hydrogenase, b-type cytochrome subunit -
MPG58_RS03690 (MPG58_03690) 789281..789817 + 537 WP_000078652.1 hydrogenase biosynthesis protein HydD -
MPG58_RS03695 (MPG58_03695) 789819..791357 + 1539 WP_245012200.1 protein hydE -
MPG58_RS03700 (MPG58_03700) 791362..791808 - 447 WP_245012201.1 hypothetical protein -
MPG58_RS03705 (MPG58_03705) 791900..792352 - 453 WP_000554051.1 hypothetical protein -
MPG58_RS03710 (MPG58_03710) 792534..793436 + 903 WP_245011390.1 hypothetical protein VF
MPG58_RS03715 (MPG58_03715) 793493..794173 - 681 WP_245012202.1 7-cyano-7-deazaguanine synthase QueC -
MPG58_RS03720 (MPG58_03720) 794235..795458 + 1224 WP_245012203.1 CCA tRNA nucleotidyltransferase -
MPG58_RS03725 (MPG58_03725) 795563..796216 + 654 WP_245012204.1 NAD(P)H-dependent flavin oxidoreductase FrxA -
MPG58_RS03730 (MPG58_03730) 796382..797701 + 1320 WP_245012205.1 glutamate--tRNA ligase -
MPG58_RS03735 (MPG58_03735) 797698..797991 + 294 WP_021300696.1 YggT family protein -
MPG58_RS03740 (MPG58_03740) 798000..799682 + 1683 WP_245012206.1 lytic transglycosylase domain-containing protein -
MPG58_RS03745 (MPG58_03745) 799679..800500 + 822 WP_000591490.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
MPG58_RS03750 (MPG58_03750) 800512..800919 + 408 WP_245012207.1 hypothetical protein -
MPG58_RS03755 (MPG58_03755) 800922..802190 + 1269 WP_245012208.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance