MGE detailed information
MGE type: Prophage MGE length: 54882 bp
Accession: NZ_CP093548 Location: 789278..844159 Organism: Escherichia coli strain YL03 Replicon: chromosome
Accession: NZ_CP093548 Location: 789278..844159 Organism: Escherichia coli strain YL03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPJ80_RS03945 (784594) | 784594..785421 | + | 828 | WP_000983718.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| MPJ80_RS03950 (785418) | 785418..786275 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| MPJ80_RS03955 (786272) | 786272..787129 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| MPJ80_RS03960 (787602) | 787602..788396 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| MPJ80_RS03965 (788486) | 788486..788672 | + | 187 | Protein_785 | DinI-like family protein | - |
| MPJ80_RS03970 (788942) | 788942..789235 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| MPJ80_RS03975 (789278) | 789278..790318 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| MPJ80_RS03980 (790328) | 790328..790609 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| MPJ80_RS03985 (790609) | 790609..792984 | - | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| MPJ80_RS03990 (793049) | 793049..793648 | - | 600 | WP_001542091.1 | Hypoxanthine phosphoribosyltransferase | VF |
| MPJ80_RS03995 (793716) | 793716..797195 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| MPJ80_RS04000 (797256) | 797256..797797 | - | 542 | Protein_792 | tail assembly protein | - |
| MPJ80_RS04005 (797794) | 797794..798537 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| MPJ80_RS04010 (798543) | 798543..799241 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| MPJ80_RS04015 (799241) | 799241..799570 | - | 330 | WP_000847345.1 | phage tail protein | - |
| MPJ80_RS04020 (799567) | 799567..802128 | - | 2562 | WP_048219008.1 | phage tail tape measure protein | - |
| MPJ80_RS04025 (802121) | 802121..802555 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| MPJ80_RS04030 (802537) | 802537..802959 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| MPJ80_RS04035 (802975) | 802975..803715 | - | 741 | WP_001349920.1 | phage tail protein | - |
| MPJ80_RS04040 (803723) | 803723..804118 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| MPJ80_RS04045 (804115) | 804115..804693 | - | 579 | WP_000975070.1 | phage tail protein | - |
| MPJ80_RS04050 (804705) | 804705..805058 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| MPJ80_RS04055 (805070) | 805070..805468 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| MPJ80_RS04060 (805510) | 805510..806535 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| MPJ80_RS04065 (806590) | 806590..806922 | - | 333 | WP_001708751.1 | head decoration protein | - |
| MPJ80_RS04070 (806932) | 806932..808251 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| MPJ80_RS04075 (808232) | 808232..809833 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| MPJ80_RS04080 (809830) | 809830..810036 | - | 207 | WP_000198149.1 | gpW family protein | - |
| MPJ80_RS04085 (810033) | 810033..811958 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| MPJ80_RS04090 (811933) | 811933..812478 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| MPJ80_RS04095 (812867) | 812867..813100 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| MPJ80_RS04100 (813158) | 813158..813568 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| MPJ80_RS04105 (813720) | 813720..813893 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| MPJ80_RS04110 (814065) | 814065..814295 | - | 231 | WP_000720962.1 | protein YnfN | - |
| MPJ80_RS04115 (814300) | 814300..814365 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| MPJ80_RS04120 (814368) | 814368..814556 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| MPJ80_RS04125 (814567) | 814567..814779 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| MPJ80_RS04130 (815142) | 815142..815639 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| MPJ80_RS04135 (815636) | 815636..816169 | - | 534 | WP_001092971.1 | lysozyme | - |
| MPJ80_RS04140 (816166) | 816166..816477 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| MPJ80_RS04145 (816482) | 816482..816697 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| MPJ80_RS04150 (816917) | 816917..817087 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| MPJ80_RS04155 (817451) | 817451..817666 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| MPJ80_RS04160 (817967) | 817967..818179 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| MPJ80_RS04165 (818234) | 818234..818323 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| MPJ80_RS04170 (818601) | 818601..819353 | - | 753 | WP_001047135.1 | antitermination protein | - |
| MPJ80_RS04175 (819367) | 819367..820416 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| MPJ80_RS04180 (820418) | 820418..820696 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| MPJ80_RS04185 (820763) | 820763..821014 | - | 252 | WP_000980994.1 | protein Rem | - |
| MPJ80_RS04190 (821231) | 821231..821386 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| MPJ80_RS04195 (821458) | 821458..821745 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| MPJ80_RS04200 (821745) | 821745..821984 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| MPJ80_RS04205 (822009) | 822009..822314 | + | 306 | WP_001326990.1 | protein YdfV | - |
| MPJ80_RS04210 (822517) | 822517..822849 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| MPJ80_RS04215 (823286) | 823286..823435 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| MPJ80_RS04220 (823556) | 823556..824578 | - | 1023 | Protein_836 | ISNCY family transposase ISCARN112 | Transposase |
| MPJ80_RS04225 (825083) | 825083..826105 | - | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| MPJ80_RS04230 (826108) | 826108..826722 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| MPJ80_RS04235 (826931) | 826931..827596 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| MPJ80_RS04240 (827799) | 827799..828197 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| MPJ80_RS04245 (828238) | 828238..829203 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| MPJ80_RS04250 (829184) | 829184..829705 | - | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| MPJ80_RS04255 (829689) | 829689..829916 | - | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| MPJ80_RS04260 (829997) | 829997..830404 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| MPJ80_RS04265 (830573) | 830573..830728 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| MPJ80_RS04270 (830730) | 830730..830831 | + | 102 | Protein_846 | protein YdfB | - |
| MPJ80_RS04275 (831792) | 831792..831980 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| MPJ80_RS04280 (831977) | 831977..832168 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| MPJ80_RS04285 (832262) | 832262..834733 | + | 2472 | WP_000048363.1 | exonuclease | - |
| MPJ80_RS04290 (834806) | 834806..835057 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| MPJ80_RS04295 (835092) | 835092..836372 | + | 1281 | WP_021523105.1 | Lipid-A-disaccharide synthase ; Integrase | Integrase |
| MPJ80_RS04300 (836560) | 836560..837579 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| MPJ80_RS04305 (837591) | 837591..838805 | - | 1215 | WP_257120049.1 | starvation-sensing protein RspA | - |
| MPJ80_RS04310 (839011) | 839011..839337 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| MPJ80_RS04315 (839472) | 839472..839813 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| MPJ80_RS04320 (839848) | 839848..840408 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| MPJ80_RS04325 (840411) | 840411..841121 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| MPJ80_RS04330 (841229) | 841229..841534 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| MPJ80_RS04335 (841733) | 841733..844159 | + | 2427 | WP_001551145.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| MPJ80_RS04340 (844220) | 844220..846643 | + | 2424 | WP_089502603.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| MPJ80_RS04345 (846654) | 846654..847271 | + | 618 | WP_001520568.1 | dimethylsulfoxide reductase subunit B | - |
| MPJ80_RS04350 (847273) | 847273..848127 | + | 855 | WP_020233477.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| MPJ80_RS04355 (848170) | 848170..848784 | + | 615 | WP_001520571.1 | Tat proofreading chaperone DmsD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|