MGE detailed information
MGE type: Prophage MGE length: 53080 bp
Accession: NZ_CP093548 Location: 536758..589837 Organism: Escherichia coli strain YL03 Replicon: chromosome
Accession: NZ_CP093548 Location: 536758..589837 Organism: Escherichia coli strain YL03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPJ80_RS02725 (532254) | 532254..532553 | - | 300 | Protein_537 | sensor domain-containing diguanylate cyclase | - |
| MPJ80_RS02730 (532747) | 532747..532794 | + | 48 | WP_211180494.1 | protein YnaN | - |
| MPJ80_RS02735 (532808) | 532808..533791 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| MPJ80_RS02740 (534066) | 534066..534239 | + | 174 | WP_001296046.1 | protein YnaL | - |
| MPJ80_RS02745 (534269) | 534269..535642 | + | 1374 | WP_000123748.1 | ATP-dependent RNA helicase DbpA | - |
| MPJ80_RS02750 (535771) | 535771..536706 | - | 936 | WP_001523172.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| MPJ80_RS02755 (536758) | 536758..537993 | - | 1236 | WP_000040839.1 | Multidrug resistance protein MdtM ; Integrase | Integrase |
| MPJ80_RS02760 (537995) | 537995..538210 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (538314) | 538314..538492 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (538314) | 538314..538492 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (538314) | 538314..538492 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (538314) | 538314..538492 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| MPJ80_RS02765 (538310) | 538310..538498 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| MPJ80_RS02770 (538536) | 538536..538685 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| MPJ80_RS02775 (538741) | 538741..539550 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| MPJ80_RS02780 (539543) | 539543..542143 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| MPJ80_RS02785 (542245) | 542245..542520 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| MPJ80_RS02790 (542595) | 542595..542765 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| MPJ80_RS02795 (542765) | 542765..542986 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| MPJ80_RS02800 (543428) | 543428..543916 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| MPJ80_RS02805 (543913) | 543913..544068 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| MPJ80_RS02810 (544079) | 544079..544258 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| MPJ80_RS02815 (544501) | 544501..544920 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| MPJ80_RS02820 (545000) | 545000..545254 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| MPJ80_RS02825 (545251) | 545251..545673 | + | 423 | WP_000693803.1 | toxin YdaT family protein | - |
| MPJ80_RS02830 (545751) | 545751..546539 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| MPJ80_RS02835 (546546) | 546546..547292 | + | 747 | WP_020233967.1 | ATP-binding protein | - |
| MPJ80_RS02840 (547315) | 547315..548076 | + | 762 | WP_000450716.1 | DUF1627 domain-containing protein | - |
| MPJ80_RS02845 (548092) | 548092..548514 | + | 423 | WP_029702111.1 | DUF977 family protein | - |
| MPJ80_RS02850 (548676) | 548676..549179 | + | 504 | WP_000137958.1 | hypothetical protein | - |
| MPJ80_RS02855 (549300) | 549300..550073 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| MPJ80_RS02860 (550596) | 550596..550721 | + | 126 | WP_001445775.1 | Hok/Gef family protein | - |
| MPJ80_RS02865 (550804) | 550804..551145 | - | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| MPJ80_RS02870 (552013) | 552013..552612 | + | 600 | WP_000940344.1 | DUF1367 family protein | - |
| MPJ80_RS02875 (552612) | 552612..552902 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| MPJ80_RS02880 (552899) | 552899..553441 | + | 543 | WP_000640106.1 | DUF1133 family protein | - |
| MPJ80_RS02885 (553663) | 553663..554232 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| MPJ80_RS02890 (554201) | 554201..554416 | - | 216 | WP_152948782.1 | hypothetical protein | - |
| MPJ80_RS02895 (554580) | 554580..554921 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| MPJ80_RS02900 (554925) | 554925..555401 | + | 477 | WP_023153991.1 | glycoside hydrolase family protein | - |
| MPJ80_RS02905 (555618) | 555618..555803 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| MPJ80_RS02910 (556000) | 556000..557457 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| MPJ80_RS02915 (557595) | 557595..557852 | + | 258 | Protein_575 | ParB/Srx family N-terminal domain-containing protein | - |
| MPJ80_RS02920 (558379) | 558379..559311 | + | 933 | WP_020233805.1 | hypothetical protein | - |
| MPJ80_RS02925 (559289) | 559289..559498 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| MPJ80_RS02930 (559502) | 559502..560596 | + | 1095 | WP_000089448.1 | terminase small subunit | - |
| MPJ80_RS02935 (560577) | 560577..561878 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| MPJ80_RS02940 (561881) | 561881..563287 | + | 1407 | WP_000763701.1 | DUF4055 domain-containing protein | - |
| MPJ80_RS02945 (563271) | 563271..564383 | + | 1113 | WP_001363932.1 | phage minor head protein | - |
| MPJ80_RS02950 (564488) | 564488..565252 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| MPJ80_RS02955 (565351) | 565351..566490 | + | 1140 | WP_020233804.1 | P22 phage major capsid protein family protein | - |
| MPJ80_RS02960 (566533) | 566533..566709 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| MPJ80_RS02965 (566713) | 566713..567108 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| MPJ80_RS02970 (567108) | 567108..567491 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| MPJ80_RS02975 (567492) | 567492..567872 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| MPJ80_RS02980 (567869) | 567869..568261 | + | 393 | WP_000673077.1 | phage tail terminator-like protein | - |
| MPJ80_RS02985 (568288) | 568288..569250 | + | 963 | WP_001328756.1 | phage tail tube protein | - |
| MPJ80_RS02990 (569401) | 569401..569760 | + | 360 | WP_122452218.1 | protein YdaY | - |
| MPJ80_RS02995 (569868) | 569868..570068 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| MPJ80_RS03000 (570232) | 570232..573465 | + | 3234 | WP_023153989.1 | phage tail tape measure protein | - |
| MPJ80_RS03005 (573458) | 573458..573796 | + | 339 | WP_000024051.1 | phage tail protein | - |
| MPJ80_RS03010 (573796) | 573796..574494 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| MPJ80_RS03015 (574500) | 574500..575243 | + | 744 | WP_001351716.1 | C40 family peptidase | - |
| MPJ80_RS03020 (575240) | 575240..575781 | + | 542 | Protein_596 | tail assembly protein | - |
| MPJ80_RS03025 (575842) | 575842..579321 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| MPJ80_RS03030 (579389) | 579389..579988 | + | 600 | WP_001542091.1 | HTH-type transcriptional regulator PgrR | VF |
| MPJ80_RS03035 (580053) | 580053..582452 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| MPJ80_RS03040 (582449) | 582449..582730 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| MPJ80_RS03045 (582740) | 582740..583444 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| MPJ80_RS03050 (583455) | 583455..583748 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| MPJ80_RS03055 (583768) | 583768..583878 | + | 111 | Protein_603 | tail fiber assembly protein | - |
| MPJ80_RS03060 (583976) | 583976..584566 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| MPJ80_RS03065 (584883) | 584883..585116 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| MPJ80_RS03070 (585185) | 585185..585298 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| MPJ80_RS03075 (585902) | 585902..587185 | + | 1284 | Protein_607 | MHS family MFS transporter YdfJ | - |
| MPJ80_RS03080 (587274) | 587274..588734 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| MPJ80_RS03085 (588770) | 588770..588973 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| MPJ80_RS03090 (589151) | 589151..589837 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator rspR | - |
| MPJ80_RS03095 (589926) | 589926..590672 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| MPJ80_RS03100 (590809) | 590809..592854 | + | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| MPJ80_RS03105 (592899) | 592899..592979 | - | 81 | Protein_613 | hypothetical protein | - |
| MPJ80_RS03110 (593219) | 593219..593611 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| MPJ80_RS03115 (593866) | 593866..594756 | + | 891 | WP_001523326.1 | diguanylate cyclase DgcZ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|