MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP093369 Location: 4196374..4217305 Organism: Escherichia coli strain EV36 mutant 5a Replicon: chromosome
Accession: NZ_CP093369 Location: 4196374..4217305 Organism: Escherichia coli strain EV36 mutant 5a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Q35_RS20235 (4192206) | 4192206..4193537 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| L0Q35_RS20240 (4193559) | 4193559..4194548 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| L0Q35_RS20245 (4194647) | 4194647..4195585 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| L0Q35_RS20250 (4195900) | 4195900..4196118 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| L0Q35_RS20255 (4196374) | 4196374..4196913 | + | 540 | WP_000675733.1 | protein YhaB | - |
| L0Q35_RS20260 (4196935) | 4196935..4198122 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| L0Q35_RS20270 (4199145) | 4199145..4200290 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| L0Q35_RS20275 (4200387) | 4200387..4201277 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| L0Q35_RS20280 (4201307) | 4201307..4202077 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| L0Q35_RS20285 (4202093) | 4202093..4203427 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| L0Q35_RS20290 (4203802) | 4203802..4205373 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| L0Q35_RS20295 (4205522) | 4205522..4205857 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| L0Q35_RS20300 (4205857) | 4205857..4206321 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| L0Q35_RS20305 (4206376) | 4206376..4207185 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| L0Q35_RS20310 (4207434) | 4207434..4208714 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| L0Q35_RS20315 (4208737) | 4208737..4209210 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| L0Q35_RS20320 (4209221) | 4209221..4209592 | + | 372 | Protein_3992 | PTS sugar transporter subunit IIC | - |
| L0Q35_RS20325 (4209588) | 4209588..4210145 | + | 558 | Protein_3993 | amidohydrolase family protein | - |
| L0Q35_RS20330 (4210496) | 4210496..4211650 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| L0Q35_RS20335 (4211663) | 4211663..4212523 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| L0Q35_RS20340 (4212690) | 4212690..4213166 | + | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| L0Q35_RS20345 (4213205) | 4213205..4214008 | + | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| L0Q35_RS20350 (4213998) | 4213998..4214789 | + | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| L0Q35_RS20355 (4214790) | 4214790..4215545 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| L0Q35_RS20360 (4215946) | 4215946..4216530 | + | 585 | WP_001045432.1 | fimbrial protein | - |
| L0Q35_RS20365 (4216610) | 4216610..4217305 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| L0Q35_RS20370 (4217334) | 4217334..4219850 | + | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| L0Q35_RS20375 (4219861) | 4219861..4220952 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| L0Q35_RS20380 (4220995) | 4220995..4221855 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|