MGE detailed information
MGE type: Prophage MGE length: 41941 bp
Accession: NZ_CP093369 Location: 2437074..2479014 Organism: Escherichia coli strain EV36 mutant 5a Replicon: chromosome
Accession: NZ_CP093369 Location: 2437074..2479014 Organism: Escherichia coli strain EV36 mutant 5a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Q35_RS11685 (2433177) | 2433177..2434163 | - | 987 | Protein_2295 | GGDEF domain-containing protein | - |
| L0Q35_RS11690 (2434236) | 2434236..2434595 | - | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| L0Q35_RS11695 (2434595) | 2434595..2435521 | - | 927 | WP_000257409.1 | glutaminase B | - |
| L0Q35_RS11700 (2435585) | 2435585..2436973 | - | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| L0Q35_RS11705 (2437074) | 2437074..2437955 | + | 882 | WP_000366501.1 | hypothetical protein | VF |
| L0Q35_RS11710 (2438033) | 2438033..2439148 | + | 1116 | WP_000258599.1 | putative protein YneK | - |
| L0Q35_RS11715 (2439298) | 2439298..2440488 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| L0Q35_RS11720 (2440513) | 2440513..2441178 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| L0Q35_RS11725 (2441390) | 2441390..2441824 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| L0Q35_RS11730 (2441844) | 2441844..2442227 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| L0Q35_RS11735 (2442259) | 2442259..2442477 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| L0Q35_RS11740 (2442508) | 2442508..2443407 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| L0Q35_RS11745 (2443602) | 2443602..2444789 | + | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| L0Q35_RS11750 (2444916) | 2444916..2445011 | + | 96 | WP_000901367.1 | protein MgtS | - |
| L0Q35_RS11755 (2445011) | 2445011..2445115 | + | 105 | WP_211180496.1 | protein MgtT | - |
| L0Q35_RS11760 (2445230) | 2445230..2446120 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| L0Q35_RS11765 (2446375) | 2446375..2446767 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| L0Q35_RS11770 (2447043) | 2447043..2447561 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| L0Q35_RS11775 (2447605) | 2447605..2449650 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| L0Q35_RS11780 (2449787) | 2449787..2450533 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| L0Q35_RS11785 (2450622) | 2450622..2451308 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| L0Q35_RS11790 (2451485) | 2451485..2451688 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| L0Q35_RS11795 (2451723) | 2451723..2453183 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| L0Q35_RS11800 (2453272) | 2453272..2454639 | - | 1368 | Protein_2318 | MHS family MFS transporter | - |
| L0Q35_RS11805 (2455160) | 2455160..2455273 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| L0Q35_RS11810 (2455342) | 2455342..2455575 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| L0Q35_RS11815 (2455892) | 2455892..2456482 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| L0Q35_RS11820 (2456580) | 2456580..2457155 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| L0Q35_RS11825 (2457155) | 2457155..2458117 | - | 963 | WP_001027733.1 | phage tail protein | - |
| L0Q35_RS11830 (2458068) | 2458068..2458637 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| L0Q35_RS11835 (2459026) | 2459026..2459259 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| L0Q35_RS11840 (2459317) | 2459317..2459727 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| L0Q35_RS11845 (2459879) | 2459879..2460052 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| L0Q35_RS11850 (2460224) | 2460224..2460379 | - | 156 | WP_001309517.1 | protein YnfN | - |
| L0Q35_RS11855 (2460458) | 2460458..2460523 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| L0Q35_RS11860 (2460526) | 2460526..2460714 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| L0Q35_RS11865 (2460725) | 2460725..2460937 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| L0Q35_RS11870 (2461300) | 2461300..2461797 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| L0Q35_RS11875 (2461794) | 2461794..2462327 | - | 534 | WP_001092971.1 | lysozyme | - |
| L0Q35_RS11880 (2462324) | 2462324..2462635 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| L0Q35_RS11885 (2462640) | 2462640..2462855 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| L0Q35_RS11890 (2463075) | 2463075..2463245 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| L0Q35_RS11895 (2463609) | 2463609..2463824 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| L0Q35_RS11900 (2464125) | 2464125..2464337 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| L0Q35_RS11905 (2464392) | 2464392..2464481 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| L0Q35_RS11910 (2464759) | 2464759..2465511 | - | 753 | WP_001047135.1 | antitermination protein | - |
| L0Q35_RS11915 (2465525) | 2465525..2466574 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| L0Q35_RS11920 (2466576) | 2466576..2466854 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| L0Q35_RS11925 (2466921) | 2466921..2467172 | - | 252 | WP_000980994.1 | protein Rem | - |
| L0Q35_RS11930 (2467389) | 2467389..2467544 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| L0Q35_RS11935 (2467616) | 2467616..2467903 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| L0Q35_RS11940 (2467903) | 2467903..2468142 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| L0Q35_RS11945 (2468167) | 2468167..2468472 | + | 306 | WP_001326990.1 | protein YdfV | - |
| L0Q35_RS11950 (2468675) | 2468675..2469007 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| L0Q35_RS11955 (2469444) | 2469444..2469593 | - | 150 | WP_011443592.1 | protein YdfW | - |
| L0Q35_RS11960 (2469628) | 2469628..2469906 | - | 279 | Protein_2350 | protein YdfX | - |
| L0Q35_RS11965 (2469890) | 2469890..2470120 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| L0Q35_RS11970 (2470204) | 2470204..2470611 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| L0Q35_RS11975 (2470778) | 2470778..2470933 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| L0Q35_RS22730 (2470935) | 2470935..2471063 | + | 129 | WP_000344964.1 | protein YdfB | - |
| L0Q35_RS11980 (2471093) | 2471093..2471311 | + | 219 | WP_001171942.1 | protein YdfC | - |
| L0Q35_RS11985 (2471879) | 2471879..2472067 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| L0Q35_RS11990 (2472064) | 2472064..2472255 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| L0Q35_RS11995 (2472348) | 2472348..2473115 | + | 768 | Protein_2358 | exonuclease | - |
| L0Q35_RS12000 (2473112) | 2473112..2473807 | + | 696 | Protein_2359 | IS3 family transposase IS2 | Transposase |
| L0Q35_RS12005 (2473821) | 2473821..2474978 | + | 1158 | Protein_2360 | hypothetical protein ; Integrase | Integrase |
| L0Q35_RS12010 (2475166) | 2475166..2476185 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| L0Q35_RS12015 (2476197) | 2476197..2477411 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| L0Q35_RS12020 (2477617) | 2477617..2477943 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| L0Q35_RS12025 (2478078) | 2478078..2478419 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| L0Q35_RS12030 (2478454) | 2478454..2479014 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| L0Q35_RS12035 (2479017) | 2479017..2479727 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| L0Q35_RS12040 (2479835) | 2479835..2480140 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| L0Q35_RS12045 (2480339) | 2480339..2482765 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|