MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP093368 Location: 4227396..4248327 Organism: Escherichia coli strain EV36 mutant 1a Replicon: chromosome
Accession: NZ_CP093368 Location: 4227396..4248327 Organism: Escherichia coli strain EV36 mutant 1a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0S95_RS20430 (4223228) | 4223228..4224559 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| L0S95_RS20435 (4224581) | 4224581..4225570 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| L0S95_RS20440 (4225669) | 4225669..4226607 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| L0S95_RS20445 (4226922) | 4226922..4227140 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| L0S95_RS20450 (4227396) | 4227396..4227935 | + | 540 | WP_000675733.1 | protein YhaB | - |
| L0S95_RS20455 (4227957) | 4227957..4229144 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| L0S95_RS20465 (4230167) | 4230167..4231312 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| L0S95_RS20470 (4231409) | 4231409..4232299 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| L0S95_RS20475 (4232329) | 4232329..4233099 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| L0S95_RS20480 (4233115) | 4233115..4234449 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| L0S95_RS20485 (4234824) | 4234824..4236395 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| L0S95_RS20490 (4236544) | 4236544..4236879 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| L0S95_RS20495 (4236879) | 4236879..4237343 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| L0S95_RS20500 (4237398) | 4237398..4238207 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| L0S95_RS20505 (4238456) | 4238456..4239736 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| L0S95_RS20510 (4239759) | 4239759..4240232 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| L0S95_RS20515 (4240243) | 4240243..4240614 | + | 372 | Protein_4029 | PTS sugar transporter subunit IIC | - |
| L0S95_RS20520 (4240610) | 4240610..4241167 | + | 558 | Protein_4030 | amidohydrolase family protein | - |
| L0S95_RS20525 (4241518) | 4241518..4242672 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| L0S95_RS20530 (4242685) | 4242685..4243545 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| L0S95_RS20535 (4243712) | 4243712..4244188 | + | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| L0S95_RS20540 (4244227) | 4244227..4245030 | + | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| L0S95_RS20545 (4245020) | 4245020..4245811 | + | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| L0S95_RS20550 (4245812) | 4245812..4246567 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| L0S95_RS20555 (4246968) | 4246968..4247552 | + | 585 | WP_001045432.1 | fimbrial protein | - |
| L0S95_RS20560 (4247632) | 4247632..4248327 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| L0S95_RS20565 (4248356) | 4248356..4250872 | + | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| L0S95_RS20570 (4250883) | 4250883..4251974 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| L0S95_RS20575 (4252017) | 4252017..4252877 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|