MGE detailed information
MGE type: Genomic_island MGE length: 12628 bp
Accession: NZ_CP093280 Location: 586071..598698 Organism: Pseudomonas sp. T1-3-2 Replicon: chromosome
Accession: NZ_CP093280 Location: 586071..598698 Organism: Pseudomonas sp. T1-3-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ023_RS02505 (LZ023_02505) | 581576..582322 | + | 747 | WP_268146164.1 | ABC transporter substrate-binding protein | - |
| LZ023_RS02510 (LZ023_02510) | 582382..583077 | + | 696 | WP_176569654.1 | ABC transporter permease subunit | - |
| LZ023_RS02515 (LZ023_02515) | 583074..583763 | + | 690 | WP_268146166.1 | ABC transporter permease | - |
| LZ023_RS02520 (LZ023_02520) | 583857..585089 | + | 1233 | WP_268146168.1 | methyltransferase | - |
| LZ023_RS02530 (LZ023_02530) | 585608..586063 | + | 456 | WP_268146170.1 | DUF4065 domain-containing protein | - |
| LZ023_RS02535 (LZ023_02535) | 586071..586517 | + | 447 | WP_268146172.1 | hypothetical protein | - |
| LZ023_RS02540 (LZ023_02540) | 586738..587109 | + | 372 | WP_268146174.1 | IS66 family transposase ISPpu14 | Transposase |
| LZ023_RS02545 (LZ023_02545) | 587106..587318 | + | 213 | WP_268146176.1 | IS66 family transposase ISPpu30 | Transposase |
| LZ023_RS02550 (LZ023_02550) | 587492..589016 | + | 1525 | Protein_492 | IS66 family transposase ISPpu30 | Transposase |
| LZ023_RS02555 (LZ023_02555) | 589418..590524 | + | 1107 | WP_268146178.1 | SIR2 family protein | - |
| LZ023_RS02560 (LZ023_02560) | 590521..592395 | + | 1875 | WP_268146180.1 | ATP-binding protein | - |
| LZ023_RS02565 (LZ023_02565) | 592404..592613 | + | 210 | WP_268146182.1 | KTSC domain-containing protein | - |
| LZ023_RS02570 (LZ023_02570) | 593146..593385 | - | 240 | WP_268146184.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| LZ023_RS02575 (LZ023_02575) | 593710..594021 | + | 312 | WP_268146186.1 | hypothetical protein | - |
| LZ023_RS02580 (LZ023_02580) | 594577..594966 | - | 390 | WP_268146188.1 | hypothetical protein | - |
| LZ023_RS02585 (LZ023_02585) | 595193..595555 | - | 363 | WP_268146190.1 | hypothetical protein | - |
| LZ023_RS02590 (LZ023_02590) | 595588..596166 | - | 579 | WP_268146192.1 | hypothetical protein | - |
| LZ023_RS02595 (LZ023_02595) | 596397..596978 | + | 582 | WP_268146194.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| LZ023_RS02600 (LZ023_02600) | 596975..597616 | + | 642 | WP_268146196.1 | DUF4433 domain-containing protein | Toxin Detail |
| LZ023_RS02605 (LZ023_02605) | 597616..598698 | + | 1083 | WP_268146198.1 | macro domain-containing protein | Antitoxin Detail |
| LZ023_RS02610 (LZ023_02610) | 598737..599618 | - | 882 | Protein_504 | sensor domain-containing diguanylate cyclase | - |
| LZ023_RS02615 (LZ023_02615) | 599879..600298 | + | 420 | WP_268146200.1 | PH domain-containing protein | - |
| LZ023_RS02620 (LZ023_02620) | 600417..600860 | + | 444 | WP_268146202.1 | DUF3828 domain-containing protein | - |
| LZ023_RS02625 (LZ023_02625) | 600935..601522 | - | 588 | WP_268146204.1 | hypothetical protein | - |
| LZ023_RS02630 (LZ023_02630) | 601690..602595 | + | 906 | WP_268146206.1 | glycosyltransferase family 2 protein | - |
| LZ023_RS02635 (LZ023_02635) | 602615..603244 | + | 630 | WP_268146208.1 | CatB-related O-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|