MGE detailed information
MGE type: Conjugative plasmid MGE length: 90339 bp
Accession: NZ_CP093229 Location: 1..90339 Organism: Escherichia coli strain EC-16-35 Replicon: plasmid pEC-16-35-4
Accession: NZ_CP093229 Location: 1..90339 Organism: Escherichia coli strain EC-16-35 Replicon: plasmid pEC-16-35-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MNY24_RS24910 | 46..1077 | + | 1032 | WP_000907881.1 | plasmid replication initiator RepA | - |
| MNY24_RS24915 | 1775..1933 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| MNY24_RS24920 | 1988..2257 | + | 270 | WP_000079932.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| MNY24_RS24925 | 2257..2535 | + | 279 | WP_013009346.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| MNY24_RS24930 | 2731..3027 | - | 297 | WP_001419651.1 | hypothetical protein | - |
| MNY24_RS24935 | 3372..3959 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| MNY24_RS24940 | 4241..4834 | - | 594 | WP_001401779.1 | ProQ/FINO family protein | - |
| MNY24_RS24945 | 5188..6534 | + | 1347 | WP_001132021.1 | protein YagA | - |
| MNY24_RS24950 | 6866..7570 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MNY24_RS24955 | 7881..8183 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| MNY24_RS24960 | 8180..8806 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| MNY24_RS24965 | 9010..10281 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| MNY24_RS24970 | 10281..10718 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MNY24_RS24975 | 10715..10963 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| MNY24_RS24980 | 11382..12284 | + | 903 | WP_064670763.1 | DUF1281 domain-containing protein | - |
| MNY24_RS24985 | 12288..12593 | + | 306 | WP_077627285.1 | hypothetical protein | - |
| MNY24_RS24990 | 12670..13353 | + | 684 | WP_000085883.1 | DNA methylase | - |
| MNY24_RS24995 | 13354..13575 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| MNY24_RS25000 | 13589..14023 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| MNY24_RS25005 | 14068..14843 | + | 776 | Protein_19 | hypothetical protein | - |
| MNY24_RS25010 | 15258..15683 | + | 426 | WP_001198874.1 | antirestriction protein | - |
| MNY24_RS25015 | 15730..16152 | + | 423 | WP_241556011.1 | DUF1380 family protein | - |
| MNY24_RS25020 | 16149..16340 | + | 192 | WP_001703906.1 | hypothetical protein | - |
| MNY24_RS25025 | 16673..16741 | - | 69 | Protein_23 | pilus protein | - |
| MNY24_RS25030 | 17110..17637 | + | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| MNY24_RS25035 | 17695..17928 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| MNY24_RS25040 | 17987..19985 | + | 1999 | Protein_26 | ParB/RepB/Spo0J family partition protein | - |
| MNY24_RS25045 | 20040..20474 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| MNY24_RS25050 | 20471..21190 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| MNY24_RS25055 | 21187..21783 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| MNY24_RS25060 | 22246..22746 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| MNY24_RS25065 | 23479..23913 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| MNY24_RS25070 | 24006..24272 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| MNY24_RS25075 | 24449..24838 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| MNY24_RS25080 | 24835..25725 | + | 891 | WP_000038343.1 | Recombination-promoting nuclease RpnA | VF |
| MNY24_RS25085 | 25725..25970 | + | 246 | WP_001260882.1 | hypothetical protein | - |
| MNY24_RS25090 | 26001..26252 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| MNY24_RS25095 | 26832..27680 | + | 849 | WP_013307867.1 | DUF4942 domain-containing protein | - |
| MNY24_RS25100 | 27766..28101 | - | 336 | WP_000157090.1 | hypothetical protein | - |
| MNY24_RS25105 | 28334..28666 | + | 333 | WP_001291057.1 | plasmid mobilization protein MobA | - |
| MNY24_RS25110 | 28678..31398 | + | 2721 | WP_000991405.1 | Protein TraI | Relaxase |
| MNY24_RS25115 | 31619..33919 | - | 2301 | WP_013307869.1 | F-type conjugative transfer protein TrbC | - |
| MNY24_RS25120 | 33900..35024 | - | 1125 | WP_000152382.1 | DsbC family protein | - |
| MNY24_RS25125 | 35021..36319 | - | 1299 | WP_001402878.1 | IncI1-type conjugal transfer protein TrbA | - |
| MNY24_RS25980 | 37116..37211 | + | 96 | WP_001363141.1 | DinQ-like type I toxin DqlB | - |
| MNY24_RS25135 | 37274..37450 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| MNY24_RS25140 | 37600..38067 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| MNY24_RS25145 | 38226..38849 | + | 624 | WP_001155247.1 | helix-turn-helix domain-containing protein | - |
| MNY24_RS25150 | 39047..39262 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| MNY24_RS25155 | 39266..39634 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| MNY24_RS25160 | 39646..39837 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| MNY24_RS25165 | 39925..40167 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| MNY24_RS25170 | 40497..40649 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| MNY24_RS25175 | 40787..42373 | - | 1587 | WP_000004564.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| MNY24_RS25180 | 42647..43300 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| MNY24_RS25185 | 43388..45553 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| MNY24_RS25190 | 45628..46197 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| MNY24_RS25195 | 46194..47399 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| MNY24_RS25200 | 47357..47977 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| MNY24_RS25205 | 47977..51021 | - | 3045 | WP_013307872.1 | conjugal transfer nucleotide-binding protein | - |
| MNY24_RS25210 | 51189..51614 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| MNY24_RS25215 | 51611..51961 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| MNY24_RS25220 | 51992..53605 | + | 1614 | WP_000080193.1 | IS66 family transposase ISEc23 | Transposase |
| MNY24_RS25225 | 53856..54674 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| MNY24_RS25985 | 54589..54840 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| MNY24_RS25235 | 54897..55295 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| MNY24_RS25240 | 55342..55872 | - | 531 | WP_000987023.1 | conjugal transfer protein TraQ | - |
| MNY24_RS25245 | 55869..56582 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| MNY24_RS25250 | 56579..57916 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| MNY24_RS25255 | 57920..58894 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| MNY24_RS25260 | 58905..59600 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| MNY24_RS25265 | 59612..59962 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| MNY24_RS25270 | 59979..64040 | - | 4062 | WP_013307874.1 | DUF5710 domain-containing protein | - |
| MNY24_RS25275 | 64394..64975 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| MNY24_RS25280 | 64983..65438 | - | 456 | Protein_74 | IS5 family transposase | - |
| MNY24_RS25285 | 65473..66348 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| MNY24_RS25290 | 66598..67860 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| MNY24_RS25295 | 68272..68562 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| MNY24_RS25300 | 68559..69707 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| MNY24_RS25305 | 69691..70527 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| MNY24_RS25310 | 70524..70982 | - | 459 | WP_025750398.1 | DotD/TraH family lipoprotein | - |
| MNY24_RS25315 | 71086..72288 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| MNY24_RS25320 | 72390..73211 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| MNY24_RS25325 | 73424..74548 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| MNY24_RS25330 | 74598..74906 | + | 309 | WP_102166912.1 | pilus assembly protein | - |
| MNY24_RS25990 | 75094..75225 | + | 132 | WP_255639686.1 | hypothetical protein | - |
| MNY24_RS25335 | 75801..76040 | + | 240 | WP_000271302.1 | hypothetical protein | - |
| MNY24_RS25340 | 76045..77406 | - | 1362 | WP_021532399.1 | hypothetical protein | VF |
| MNY24_RS25345 | 77424..78050 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| MNY24_RS25350 | 78066..78551 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| MNY24_RS25355 | 78596..79132 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| MNY24_RS25360 | 79194..80288 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| MNY24_RS25365 | 80290..81798 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| MNY24_RS25370 | 81901..82359 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| MNY24_RS25375 | 82349..83644 | - | 1296 | WP_000129885.1 | type 4b pilus protein PilO2 | - |
| MNY24_RS25380 | 83665..85284 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| MNY24_RS25385 | 85316..85753 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| MNY24_RS25390 | 85757..86827 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| MNY24_RS25395 | 87054..87389 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| MNY24_RS25400 | 87506..87748 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| MNY24_RS25405 | 87829..87972 | - | 144 | WP_072105535.1 | hypothetical protein | - |
| MNY24_RS25410 | 88239..88901 | - | 663 | WP_005082527.1 | hypothetical protein | - |
| MNY24_RS25415 | 89041..89547 | - | 507 | WP_064670812.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|