MGE detailed information
MGE type: Genomic_island MGE length: 26746 bp
Accession: NZ_CP093068 Location: 3987461..4014206 Organism: Escherichia coli strain BR1220 Replicon: chromosome
Accession: NZ_CP093068 Location: 3987461..4014206 Organism: Escherichia coli strain BR1220 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MM431_RS19540 (3982576) | 3982576..3983358 | + | 783 | WP_001260503.1 | flagellar biosynthetic protein FliR | - |
| MM431_RS19545 (3983348) | 3983348..3984487 | + | 1140 | WP_000785661.1 | flagellar type III secretion system protein FlhB | - |
| MM431_RS19550 (3984471) | 3984471..3986564 | + | 2094 | WP_061357700.1 | flagellar biosynthesis protein FlhA | - |
| MM431_RS19555 (3986788) | 3986788..3987285 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| MM431_RS19560 (3987461) | 3987461..3988210 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| MM431_RS19565 (3988420) | 3988420..3988680 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| MM431_RS19570 (3988683) | 3988683..3988961 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| MM431_RS19575 (3989117) | 3989117..3989857 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| MM431_RS19580 (3989828) | 3989828..3990595 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| MM431_RS19585 (3990801) | 3990801..3991379 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| MM431_RS19590 (3991619) | 3991619..3994063 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| MM431_RS19595 (3994106) | 3994106..3994552 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| MM431_RS19600 (3994733) | 3994733..3995503 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| MM431_RS19605 (3995544) | 3995544..3996680 | - | 1137 | WP_032295507.1 | ISAs1 family transposase ISEc1 | Transposase |
| MM431_RS19610 (3997111) | 3997111..3997503 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| MM431_RS19615 (3997481) | 3997481..3998890 | - | 1410 | Protein_3863 | Protein RhsD | VF |
| MM431_RS19620 (3998890) | 3998890..4001403 | + | 2514 | Protein_3864 | Protein ClpV1 | VF |
| MM431_RS19625 (4001400) | 4001400..4002143 | + | 744 | WP_000088852.1 | hypothetical protein | VF |
| MM431_RS19630 (4002183) | 4002183..4003118 | + | 936 | Protein_3866 | hypothetical protein | VF |
| MM431_RS19635 (4003227) | 4003227..4006661 | + | 3435 | WP_122545204.1 | hypothetical protein | VF |
| MM431_RS19640 (4006672) | 4006672..4008121 | + | 1450 | Protein_3868 | hypothetical protein | VF |
| MM431_RS19645 (4008048) | 4008048..4008530 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| MM431_RS19650 (4008574) | 4008574..4009488 | + | 915 | WP_000908066.1 | hypothetical protein | - |
| MM431_RS19655 (4009498) | 4009498..4009977 | + | 480 | WP_001236645.1 | protein YkfM | - |
| MM431_RS19660 (4010113) | 4010113..4010898 | - | 786 | WP_001086141.1 | lipoprotein | - |
| MM431_RS19670 (4011435) | 4011435..4012166 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| MM431_RS19675 (4012231) | 4012231..4012698 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| MM431_RS19680 (4012695) | 4012695..4013417 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| MM431_RS19685 (4013451) | 4013451..4014206 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| MM431_RS19690 (4014278) | 4014278..4015636 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| MM431_RS19695 (4015684) | 4015684..4016280 | - | 597 | Protein_3878 | methyltransferase domain-containing protein | - |
| MM431_RS19700 (4016311) | 4016311..4017111 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| MM431_RS19705 (4017352) | 4017352..4018266 | + | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| MM431_RS19710 (4018263) | 4018263..4019066 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|