MGE detailed information
MGE type: Prophage MGE length: 23675 bp
Accession: NZ_CP093068 Location: 2446852..2470526 Organism: Escherichia coli strain BR1220 Replicon: chromosome
Accession: NZ_CP093068 Location: 2446852..2470526 Organism: Escherichia coli strain BR1220 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MM431_RS11860 (2442103) | 2442103..2442813 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| MM431_RS11865 (2442816) | 2442816..2443376 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| MM431_RS11870 (2443411) | 2443411..2443752 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| MM431_RS11875 (2443887) | 2443887..2444213 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| MM431_RS11880 (2444419) | 2444419..2445633 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| MM431_RS11885 (2445645) | 2445645..2446664 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| MM431_RS11890 (2446852) | 2446852..2448132 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| MM431_RS11895 (2448167) | 2448167..2448418 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| MM431_RS11900 (2448491) | 2448491..2450472 | - | 1982 | Protein_2342 | 3'-5' exoribonuclease | - |
| MM431_RS11905 (2450462) | 2450462..2450713 | + | 252 | Protein_2343 | DUF977 family protein | - |
| MM431_RS11910 (2450710) | 2450710..2451199 | + | 490 | Protein_2344 | class I SAM-dependent methyltransferase | - |
| MM431_RS11915 (2451677) | 2451677..2452098 | + | 422 | Protein_2345 | hypothetical protein | - |
| MM431_RS11920 (2452754) | 2452754..2453776 | + | 1023 | Protein_2346 | ISNCY family transposase ISCARN112 | Transposase |
| MM431_RS11925 (2453897) | 2453897..2454046 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| MM431_RS11930 (2454483) | 2454483..2454815 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| MM431_RS11935 (2455018) | 2455018..2455323 | - | 306 | WP_001326990.1 | protein YdfV | - |
| MM431_RS11940 (2455348) | 2455348..2455587 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| MM431_RS11945 (2455587) | 2455587..2455874 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| MM431_RS11950 (2455946) | 2455946..2456101 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| MM431_RS11955 (2456318) | 2456318..2456569 | + | 252 | WP_000980994.1 | protein Rem | - |
| MM431_RS11960 (2456636) | 2456636..2456914 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| MM431_RS11965 (2456916) | 2456916..2457965 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| MM431_RS11970 (2457979) | 2457979..2458731 | + | 753 | WP_001047135.1 | antitermination protein | - |
| MM431_RS11975 (2459009) | 2459009..2459098 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| MM431_RS11980 (2459153) | 2459153..2459365 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| MM431_RS11985 (2459666) | 2459666..2459881 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| MM431_RS11990 (2460245) | 2460245..2460415 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| MM431_RS11995 (2460635) | 2460635..2460850 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| MM431_RS12000 (2460855) | 2460855..2461166 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| MM431_RS12005 (2461163) | 2461163..2461696 | + | 534 | WP_001092971.1 | lysozyme | - |
| MM431_RS12010 (2461693) | 2461693..2462190 | + | 498 | WP_077513904.1 | DUF2514 domain-containing protein | - |
| MM431_RS12015 (2462553) | 2462553..2462765 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| MM431_RS12020 (2462776) | 2462776..2462964 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| MM431_RS12025 (2462967) | 2462967..2463032 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| MM431_RS12030 (2463037) | 2463037..2463267 | + | 231 | WP_000720962.1 | protein YnfN | - |
| MM431_RS12035 (2463439) | 2463439..2463612 | + | 174 | WP_241468780.1 | addiction module toxin, GnsA/GnsB family | - |
| MM431_RS12040 (2463764) | 2463764..2464174 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| MM431_RS12045 (2464232) | 2464232..2464465 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| MM431_RS12050 (2464854) | 2464854..2465111 | + | 258 | WP_001310828.1 | terminase small subunit | - |
| MM431_RS12055 (2465086) | 2465086..2466345 | + | 1260 | Protein_2373 | phage tail protein | - |
| MM431_RS12060 (2466432) | 2466432..2466644 | + | 213 | Protein_2374 | hypothetical protein | - |
| MM431_RS12065 (2466644) | 2466644..2467219 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| MM431_RS12070 (2467317) | 2467317..2467907 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| MM431_RS12075 (2468224) | 2468224..2468457 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| MM431_RS12080 (2468526) | 2468526..2468639 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| MM431_RS12085 (2469243) | 2469243..2470526 | + | 1284 | Protein_2379 | MHS family MFS transporter YdfJ | - |
| MM431_RS12090 (2470615) | 2470615..2472075 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| MM431_RS12095 (2472110) | 2472110..2472313 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| MM431_RS12100 (2472490) | 2472490..2473176 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| MM431_RS12105 (2473265) | 2473265..2474011 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|