MGE detailed information
MGE type: Genomic_island MGE length: 12810 bp
Accession: NZ_CP092973 Location: 2346449..2359258 Organism: Escherichia coli strain WCHEC005215 Replicon: chromosome
Accession: NZ_CP092973 Location: 2346449..2359258 Organism: Escherichia coli strain WCHEC005215 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MM176_RS11285 (2346449) | 2346449..2346715 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| MM176_RS11290 (2346715) | 2346715..2348037 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| MM176_RS11295 (2348349) | 2348349..2348557 | + | 209 | Protein_2224 | AraC family transcriptional regulator | - |
| MM176_RS11300 (2348812) | 2348812..2350038 | + | 1227 | Protein_2225 | hypothetical protein | VF |
| MM176_RS11305 (2350052) | 2350052..2350582 | + | 531 | WP_000876763.1 | hypothetical protein | VF |
| MM176_RS11310 (2350595) | 2350595..2351098 | + | 504 | WP_000825452.1 | hypothetical protein | VF |
| MM176_RS11315 (2351157) | 2351157..2352071 | + | 915 | WP_000520662.1 | hypothetical protein | VF |
| MM176_RS11320 (2352405) | 2352405..2354684 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| MM176_RS11325 (2354932) | 2354932..2355129 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| MM176_RS11330 (2355204) | 2355204..2355965 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| MM176_RS11335 (2356367) | 2356367..2358049 | + | 1683 | WP_001295684.1 | sulfatase | - |
| MM176_RS11340 (2358101) | 2358101..2359258 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| MM176_RS11345 (2359224) | 2359224..2359346 | - | 123 | WP_120795387.1 | protein YneP | - |
| MM176_RS11350 (2359549) | 2359549..2361234 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| MM176_RS11355 (2361272) | 2361272..2363644 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.003 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.003 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.003 |