MGE detailed information
MGE type: Conjugative plasmid MGE length: 56569 bp
Accession: NZ_CP092924 Location: 1..56569 Organism: Pseudomonas syringae pv. tagetis strain ICMP 4091 Replicon: plasmid pTagA
Accession: NZ_CP092924 Location: 1..56569 Organism: Pseudomonas syringae pv. tagetis strain ICMP 4091 Replicon: plasmid pTagA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MME58_RS26790 (MME58_26790) | 1..1317 | + | 1317 | WP_055005742.1 | replication initiation protein | - |
| MME58_RS26795 (MME58_26795) | 1456..1881 | + | 426 | WP_055005743.1 | S24 family peptidase | - |
| MME58_RS26800 (MME58_26800) | 1859..3157 | + | 1299 | WP_055005744.1 | Y-family DNA polymerase | - |
| MME58_RS26805 (MME58_26805) | 3233..3553 | - | 321 | WP_005782530.1 | hypothetical protein | - |
| MME58_RS26810 (MME58_26810) | 3819..4106 | + | 288 | WP_016569387.1 | hypothetical protein | - |
| MME58_RS26815 (MME58_26815) | 4200..4610 | + | 411 | WP_005782529.1 | hypothetical protein | - |
| MME58_RS26820 (MME58_26820) | 4948..5148 | + | 201 | WP_003348581.1 | hypothetical protein | - |
| MME58_RS26825 (MME58_26825) | 5261..5911 | + | 651 | WP_003348583.1 | AAA family ATPase | - |
| MME58_RS26830 (MME58_26830) | 5901..6188 | + | 288 | WP_003348585.1 | hypothetical protein | - |
| MME58_RS26835 (MME58_26835) | 6400..7041 | + | 642 | WP_055005745.1 | SOS response-associated peptidase | - |
| MME58_RS26840 (MME58_26840) | 7229..7804 | + | 576 | WP_003348590.1 | PBECR2 nuclease fold domain-containing protein | - |
| MME58_RS26845 (MME58_26845) | 8742..9692 | - | 951 | WP_241409139.1 | IS91 family transposase ISWz1 | Transposase |
| MME58_RS26850 (MME58_26850) | 9694..10377 | - | 684 | WP_233591031.1 | hypothetical protein | - |
| MME58_RS26855 (MME58_26855) | 10570..12189 | + | 1620 | WP_003425021.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| MME58_RS26860 (MME58_26860) | 12315..12692 | - | 378 | WP_010428875.1 | DUF1264 domain-containing protein | - |
| MME58_RS26865 (MME58_26865) | 12873..13097 | + | 225 | WP_003425025.1 | hypothetical protein | - |
| MME58_RS26870 (MME58_26870) | 13185..13393 | - | 209 | Protein_16 | hybrid sensor histidine kinase/response regulator | - |
| MME58_RS26875 (MME58_26875) | 14057..14695 | + | 639 | Protein_17 | arsenic resistance protein | - |
| MME58_RS26880 (MME58_26880) | 14811..15134 | + | 324 | WP_003425054.1 | DUF190 domain-containing protein | - |
| MME58_RS26885 (MME58_26885) | 15383..16729 | + | 1347 | WP_011267047.1 | voltage-gated chloride channel family protein | - |
| MME58_RS26890 (MME58_26890) | 16726..17091 | + | 366 | WP_003317538.1 | hypothetical protein | - |
| MME58_RS26895 (MME58_26895) | 17172..17495 | + | 324 | WP_003425060.1 | DUF190 domain-containing protein | - |
| MME58_RS26900 (MME58_26900) | 17538..17804 | + | 267 | WP_003317536.1 | hypothetical protein | - |
| MME58_RS26905 (MME58_26905) | 17899..18240 | + | 342 | WP_003317535.1 | hypothetical protein | - |
| MME58_RS26910 (MME58_26910) | 18314..19597 | + | 1284 | WP_003317534.1 | phosphopyruvate hydratase | - |
| MME58_RS26915 (MME58_26915) | 19713..20258 | + | 546 | WP_003317533.1 | inorganic diphosphatase | - |
| MME58_RS26920 (MME58_26920) | 20258..20860 | + | 603 | WP_003317532.1 | uracil-DNA glycosylase | - |
| MME58_RS26925 (MME58_26925) | 20869..22038 | - | 1170 | WP_010428856.1 | TDT family transporter | - |
| MME58_RS26930 (MME58_26930) | 22156..23052 | + | 897 | WP_003317531.1 | LysR family transcriptional regulator | - |
| MME58_RS26935 (MME58_26935) | 23210..24202 | + | 993 | WP_003317529.1 | YncE family protein | - |
| MME58_RS26940 (MME58_26940) | 24532..24912 | + | 381 | WP_003317528.1 | hypothetical protein | - |
| MME58_RS26945 (MME58_26945) | 25627..26589 | - | 963 | WP_003425065.1 | IS91 family transposase ISTha3 | Transposase |
| MME58_RS26950 (MME58_26950) | 26927..27175 | + | 249 | WP_004662018.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| MME58_RS26955 (MME58_26955) | 27188..27538 | + | 351 | WP_020304269.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MME58_RS26960 (MME58_26960) | 27654..28427 | - | 774 | WP_055005858.1 | Oxygen regulatory protein NreC | VF |
| MME58_RS26965 (MME58_26965) | 28536..29636 | + | 1101 | WP_055005859.1 | polyamine ABC transporter substrate-binding protein | - |
| MME58_RS26970 (MME58_26970) | 29734..29931 | + | 198 | WP_020304272.1 | hypothetical protein | - |
| MME58_RS26975 (MME58_26975) | 29943..30338 | - | 396 | WP_055005860.1 | helix-turn-helix transcriptional regulator | - |
| MME58_RS26980 (MME58_26980) | 30555..31067 | + | 513 | WP_055005870.1 | transcription termination/antitermination NusG family protein | - |
| MME58_RS26985 (MME58_26985) | 31156..31398 | + | 243 | WP_055005861.1 | hypothetical protein | - |
| MME58_RS26990 (MME58_26990) | 31411..32118 | + | 708 | WP_055005862.1 | Type IV secretion system protein virB1 | VF |
| MME58_RS26995 (MME58_26995) | 32118..32453 | + | 336 | WP_025391077.1 | hypothetical protein | - |
| MME58_RS27000 (MME58_27000) | 32466..32942 | + | 477 | WP_055005863.1 | VirB3 family type IV secretion system protein | - |
| MME58_RS27005 (MME58_27005) | 32857..35355 | + | 2499 | WP_233591032.1 | conjugal transfer protein | - |
| MME58_RS27010 (MME58_27010) | 35352..36032 | + | 681 | WP_055005865.1 | P-type DNA transfer protein VirB5 | - |
| MME58_RS27015 (MME58_27015) | 36048..36254 | + | 207 | WP_005782472.1 | hypothetical protein | - |
| MME58_RS27020 (MME58_27020) | 36281..37225 | + | 945 | WP_055005866.1 | type IV secretion system protein | - |
| MME58_RS27025 (MME58_27025) | 37285..37569 | + | 285 | WP_082427332.1 | conjugal transfer protein | - |
| MME58_RS27030 (MME58_27030) | 37607..38395 | + | 789 | WP_010199854.1 | type IV secretion system protein | - |
| MME58_RS27035 (MME58_27035) | 38385..39194 | + | 810 | WP_055005867.1 | P-type conjugative transfer protein VirB9 | - |
| MME58_RS27040 (MME58_27040) | 39181..40548 | + | 1368 | WP_055005868.1 | Type IV secretion system protein virB10 | VF |
| MME58_RS27045 (MME58_27045) | 40558..41589 | + | 1032 | WP_104742476.1 | Type IV secretion system protein VirB11 | VF |
| MME58_RS27050 (MME58_27050) | 41599..41955 | + | 357 | WP_010217013.1 | hypothetical protein | - |
| MME58_RS27055 (MME58_27055) | 42082..42312 | + | 231 | WP_055007055.1 | hypothetical protein | - |
| MME58_RS27060 (MME58_27060) | 42312..43973 | + | 1662 | WP_055007056.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MME58_RS27065 (MME58_27065) | 44014..44376 | + | 363 | WP_055007057.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| MME58_RS27070 (MME58_27070) | 44404..46569 | + | 2166 | WP_104742477.1 | type IA DNA topoisomerase | - |
| MME58_RS27075 (MME58_27075) | 46597..47364 | + | 768 | WP_055007059.1 | hypothetical protein | - |
| MME58_RS27080 (MME58_27080) | 47428..48033 | + | 606 | WP_055007060.1 | single-stranded DNA-binding protein | - |
| MME58_RS27085 (MME58_27085) | 48341..49060 | + | 720 | WP_055007061.1 | StbB family protein | - |
| MME58_RS27090 (MME58_27090) | 49057..49629 | + | 573 | WP_055007062.1 | hypothetical protein | - |
| MME58_RS27095 (MME58_27095) | 49652..50074 | - | 423 | WP_241409138.1 | hypothetical protein | - |
| MME58_RS27100 (MME58_27100) | 50416..51141 | + | 726 | WP_055007064.1 | hypothetical protein | - |
| MME58_RS27105 (MME58_27105) | 51131..51841 | + | 711 | Protein_63 | hypothetical protein | Relaxase |
| MME58_RS27110 (MME58_27110) | 52128..52547 | + | 420 | WP_017279388.1 | hypothetical protein | Relaxase |
| MME58_RS27115 (MME58_27115) | 52871..54880 | + | 2010 | WP_241409140.1 | hypothetical protein | Relaxase |
| MME58_RS27120 (MME58_27120) | 55010..55660 | + | 651 | WP_003407061.1 | AAA family ATPase | - |
| MME58_RS27125 (MME58_27125) | 55651..56004 | + | 354 | WP_003407059.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|