MGE detailed information
MGE type: Prophage MGE length: 89828 bp
Accession: NZ_CP092923 Location: 704666..794493 Organism: Pseudomonas syringae pv. tagetis strain ICMP 4091 Replicon: chromosome
Accession: NZ_CP092923 Location: 704666..794493 Organism: Pseudomonas syringae pv. tagetis strain ICMP 4091 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MME58_RS03070 (MME58_03070) | 701193..704669 | + | 3477 | WP_055005164.1 | exodeoxyribonuclease V subunit gamma | - |
| MME58_RS03075 (MME58_03075) | 704666..708358 | + | 3693 | WP_055005165.1 | exodeoxyribonuclease V subunit beta | - |
| MME58_RS03080 (MME58_03080) | 708355..710448 | + | 2094 | WP_055005166.1 | exodeoxyribonuclease V subunit alpha | - |
| MME58_RS03085 (MME58_03085) | 710589..710843 | + | 255 | Protein_606 | DNA mismatch repair protein MutT | - |
| MME58_RS03090 (MME58_03090) | 711039..711467 | - | 429 | WP_233590916.1 | hypothetical protein | - |
| MME58_RS03095 (MME58_03095) | 711442..712611 | - | 1170 | WP_055005167.1 | polymorphic toxin type 44 domain-containing protein | - |
| MME58_RS03100 (MME58_03100) | 712859..713803 | - | 945 | WP_055005168.1 | LysR family transcriptional regulator | - |
| MME58_RS03105 (MME58_03105) | 713962..715488 | + | 1527 | WP_055005169.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| MME58_RS03110 (MME58_03110) | 715518..716408 | + | 891 | WP_055005170.1 | 3-hydroxyisobutyrate dehydrogenase | - |
| MME58_RS03115 (MME58_03115) | 716523..718493 | + | 1971 | WP_055005171.1 | hypothetical protein | VF |
| MME58_RS03120 (MME58_03120) | 718646..719980 | - | 1335 | WP_055005172.1 | ATP-binding protein | - |
| MME58_RS03125 (MME58_03125) | 720010..720774 | - | 765 | WP_055005173.1 | hypothetical protein | VF |
| MME58_RS03130 (MME58_03130) | 721067..722794 | + | 1728 | WP_055005174.1 | hypothetical protein | VF |
| MME58_RS03135 (MME58_03135) | 722862..723629 | - | 768 | WP_055005175.1 | phosphonate ABC transporter, permease protein PhnE | - |
| MME58_RS03140 (MME58_03140) | 723626..724453 | - | 828 | WP_055005176.1 | ABC transporter permease | - |
| MME58_RS03145 (MME58_03145) | 724447..725244 | - | 798 | WP_055005177.1 | hypothetical protein | VF |
| MME58_RS03150 (MME58_03150) | 725241..726092 | - | 852 | WP_055005178.1 | putative selenate ABC transporter substrate-binding protein | - |
| MME58_RS03155 (MME58_03155) | 726328..727362 | + | 1035 | WP_054987694.1 | selenide, water dikinase SelD | - |
| MME58_RS03160 (MME58_03160) | 727362..728462 | + | 1101 | WP_055005179.1 | tRNA 2-selenouridine(34) synthase MnmH | - |
| MME58_RS03165 (MME58_03165) | 728498..729262 | + | 765 | WP_054987692.1 | sulfite exporter TauE/SafE family protein | - |
| MME58_RS03170 (MME58_03170) | 729460..730047 | + | 588 | WP_054987691.1 | NAD(P)H-dependent oxidoreductase | - |
| MME58_RS03175 (MME58_03175) | 730122..731018 | + | 897 | WP_055005180.1 | hypothetical protein | VF |
| MME58_RS03180 (MME58_03180) | 731112..732080 | - | 969 | WP_054987689.1 | polyprenyl synthetase family protein | - |
| MME58_RS03185 (MME58_03185) | 732320..732631 | + | 312 | WP_002551971.1 | 50S ribosomal protein L21 | - |
| MME58_RS03190 (MME58_03190) | 732664..732939 | + | 276 | WP_002551972.1 | 50S ribosomal protein L27 | - |
| MME58_RS03195 (MME58_03195) | 733156..734379 | + | 1224 | WP_002551973.1 | Obg family GTPase CgtA | - |
| MME58_RS03200 (MME58_03200) | 734470..735588 | + | 1119 | WP_054987688.1 | glutamate 5-kinase | - |
| MME58_RS03205 (MME58_03205) | 735614..736084 | + | 471 | WP_054987687.1 | CreA family protein | - |
| MME58_RS03210 (MME58_03210) | 736298..736576 | - | 279 | WP_003344603.1 | 30S ribosomal protein S20 | - |
| MME58_RS03215 (MME58_03215) | 736827..738365 | + | 1539 | WP_054987686.1 | murein biosynthesis integral membrane protein MurJ | - |
| MME58_RS03220 (MME58_03220) | 738498..739424 | + | 927 | WP_054987685.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| MME58_RS03225 (MME58_03225) | 739445..742276 | + | 2832 | WP_055005181.1 | isoleucine--tRNA ligase | - |
| MME58_RS03230 (MME58_03230) | 742269..742775 | + | 507 | WP_054987683.1 | hypothetical protein | VF |
| MME58_RS03235 (MME58_03235) | 742768..743244 | + | 477 | WP_002551981.1 | peptidylprolyl isomerase | - |
| MME58_RS03240 (MME58_03240) | 743304..744251 | + | 948 | WP_054987682.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| MME58_RS03245 (MME58_03245) | 744258..744758 | - | 501 | WP_054987681.1 | GspH/FimT family pseudopilin | - |
| MME58_RS03250 (MME58_03250) | 744890..745366 | + | 477 | WP_055005182.1 | hypothetical protein | VF |
| MME58_RS03255 (MME58_03255) | 745356..745871 | + | 516 | WP_055005183.1 | hypothetical protein | VF |
| MME58_RS03260 (MME58_03260) | 745868..746575 | + | 708 | WP_055005184.1 | hypothetical protein | VF |
| MME58_RS03265 (MME58_03265) | 746587..747093 | + | 507 | WP_055005185.1 | hypothetical protein | VF |
| MME58_RS03270 (MME58_03270) | 747077..750283 | + | 3207 | WP_054987676.1 | hypothetical protein | VF |
| MME58_RS03275 (MME58_03275) | 750295..750699 | + | 405 | WP_054987675.1 | hypothetical protein | VF |
| MME58_RS03280 (MME58_03280) | 750727..751830 | + | 1104 | WP_055005186.1 | glycine oxidase ThiO | - |
| MME58_RS03285 (MME58_03285) | 751959..753296 | - | 1338 | WP_055005187.1 | hypothetical protein | VF |
| MME58_RS03290 (MME58_03290) | 753299..754891 | - | 1593 | WP_055005188.1 | hypothetical protein | VF |
| MME58_RS03295 (MME58_03295) | 754881..755120 | - | 240 | WP_055005191.1 | PP0621 family protein | - |
| MME58_RS03300 (MME58_03300) | 755250..756272 | - | 1023 | WP_054987671.1 | outer membrane protein assembly factor BamD | - |
| MME58_RS03305 (MME58_03305) | 756422..757384 | + | 963 | WP_054987670.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| MME58_RS03310 (MME58_03310) | 757381..758109 | + | 729 | WP_055005189.1 | peptidoglycan editing factor PgeF | - |
| MME58_RS03315 (MME58_03315) | 758281..760845 | + | 2565 | WP_055005190.1 | hypothetical protein | VF |
| MME58_RS03340 (MME58_03340) | 761901..763292 | - | 1392 | WP_055006180.1 | hypothetical protein ; Integrase | Integrase |
| MME58_RS03345 (MME58_03345) | 763341..764342 | - | 1002 | Protein_654 | hypothetical protein ; Integrase | Integrase |
| MME58_RS03350 (MME58_03350) | 764773..765465 | - | 693 | WP_055006179.1 | SOS response-associated peptidase family protein | - |
| MME58_RS03355 (MME58_03355) | 765579..766013 | + | 435 | WP_020313294.1 | S24 family peptidase | - |
| MME58_RS03360 (MME58_03360) | 766000..766320 | + | 321 | Protein_657 | DNA polymerase V subunit UmuC | - |
| MME58_RS03365 (MME58_03365) | 766378..767691 | + | 1314 | WP_055006177.1 | hypothetical protein ; Integrase | Integrase |
| MME58_RS03370 (MME58_03370) | 767859..769021 | + | 1163 | WP_103715205.1 | IS3 family transposase ISPsy24 | Transposase |
| MME58_RS03375 (MME58_03375) | 769160..769549 | + | 390 | WP_082427352.1 | DUF3742 family protein | - |
| MME58_RS03380 (MME58_03380) | 769601..771139 | - | 1539 | WP_055005946.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| MME58_RS03385 (MME58_03385) | 771136..771510 | - | 375 | WP_055005947.1 | hypothetical protein | - |
| MME58_RS03390 (MME58_03390) | 771513..771656 | - | 144 | Protein_663 | integrating conjugative element protein | - |
| MME58_RS03395 (MME58_03395) | 771646..772632 | - | 987 | Protein_664 | DNA topoisomerase | - |
| MME58_RS03400 (MME58_03400) | 772899..773663 | - | 765 | WP_233591037.1 | hypothetical protein | - |
| MME58_RS03405 (MME58_03405) | 773741..773923 | - | 183 | WP_054986847.1 | hypothetical protein | - |
| MME58_RS03410 (MME58_03410) | 774231..775190 | + | 960 | WP_054986852.1 | IS91 family transposase ISWz1 | Transposase |
| MME58_RS03415 (MME58_03415) | 775403..775795 | + | 393 | WP_082427354.1 | CesT family type III secretion system chaperone | - |
| MME58_RS03420 (MME58_03420) | 775805..777085 | + | 1281 | WP_233591036.1 | type III effector | - |
| MME58_RS03425 (MME58_03425) | 777115..777795 | + | 681 | WP_054986846.1 | hypothetical protein | - |
| MME58_RS03430 (MME58_03430) | 778241..778426 | + | 186 | WP_221041297.1 | phosphoribulokinase | - |
| MME58_RS03435 (MME58_03435) | 778663..778914 | - | 252 | WP_003348789.1 | ribbon-helix-helix protein, CopG family | - |
| MME58_RS03440 (MME58_03440) | 779003..779656 | - | 654 | WP_054986844.1 | AAA family ATPase | - |
| MME58_RS03445 (MME58_03445) | 780051..780467 | - | 417 | WP_055005949.1 | hypothetical protein | - |
| MME58_RS03450 (MME58_03450) | 780526..780813 | - | 288 | WP_041924941.1 | hypothetical protein | - |
| MME58_RS03455 (MME58_03455) | 780985..781284 | + | 300 | WP_032620802.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MME58_RS03460 (MME58_03460) | 781281..781565 | + | 285 | WP_003407168.1 | putative addiction module antidote protein | Antitoxin Detail |
| MME58_RS03470 (MME58_03470) | 781980..782319 | - | 340 | Protein_678 | DUF4113 domain-containing protein | - |
| MME58_RS03475 (MME58_03475) | 782342..784693 | + | 2352 | WP_169790335.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| MME58_RS03480 (MME58_03480) | 784792..786015 | - | 1224 | WP_055005951.1 | type III secretion system effector HopQ1-1 | - |
| MME58_RS03485 (MME58_03485) | 786814..787203 | - | 390 | WP_054988314.1 | hypothetical protein | - |
| MME58_RS03490 (MME58_03490) | 787264..787704 | - | 441 | WP_054988315.1 | hypothetical protein | VF |
| MME58_RS03495 (MME58_03495) | 787736..788215 | - | 480 | WP_162491454.1 | type 4 pilus major pilin | - |
| MME58_RS03500 (MME58_03500) | 788265..790001 | - | 1737 | WP_055005952.1 | hypothetical protein | VF |
| MME58_RS03505 (MME58_03505) | 789998..791131 | - | 1134 | WP_082427375.1 | hypothetical protein | VF |
| MME58_RS03510 (MME58_03510) | 791384..791752 | - | 369 | WP_003435844.1 | hypothetical protein | - |
| MME58_RS03515 (MME58_03515) | 791749..792723 | - | 975 | WP_054988321.1 | hypothetical protein | - |
| MME58_RS03520 (MME58_03520) | 792733..793221 | - | 489 | WP_054988322.1 | type VI secretion system tube protein Hcp | - |
| MME58_RS03525 (MME58_03525) | 793345..794505 | - | 1161 | Protein_689 | DEAD/DEAH box helicase | - |
| MME58_RS03530 (MME58_03530) | 794504..794941 | - | 438 | Protein_690 | MFS transporter | - |
| MME58_RS03535 (MME58_03535) | 795091..795546 | + | 456 | WP_055005955.1 | helix-turn-helix domain-containing protein | - |
| MME58_RS03540 (MME58_03540) | 795791..796227 | - | 437 | Protein_692 | type 4 pilus major pilin | - |
| MME58_RS03545 (MME58_03545) | 796395..798473 | - | 2079 | WP_055005956.1 | calcium-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|