MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 51306 bp
Accession: NZ_CP092921 Location: 1..51306 Organism: Pseudomonas syringae pv. helianthi strain LMG 5067 Replicon: plasmid pHelC
Accession: NZ_CP092921 Location: 1..51306 Organism: Pseudomonas syringae pv. helianthi strain LMG 5067 Replicon: plasmid pHelC
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MME54_RS28245 (MME54_28245) | 1..1314 | + | 1314 | WP_054987846.1 | replication initiation protein | - |
| MME54_RS28250 (MME54_28250) | 1540..1827 | + | 288 | WP_044311061.1 | HU family DNA-binding protein | - |
| MME54_RS28255 (MME54_28255) | 2067..2765 | + | 699 | WP_054987847.1 | GNAT family N-acetyltransferase | - |
| MME54_RS28260 (MME54_28260) | 3517..4098 | + | 582 | WP_005734896.1 | hypothetical protein | - |
| MME54_RS28265 (MME54_28265) | 4101..5015 | + | 915 | WP_054071525.1 | DUF4868 domain-containing protein | - |
| MME54_RS28270 (MME54_28270) | 5076..6005 | - | 930 | WP_054987848.1 | DUF4928 family protein | - |
| MME54_RS28275 (MME54_28275) | 6005..7153 | - | 1149 | WP_054987849.1 | DNA cytosine methyltransferase | - |
| MME54_RS28280 (MME54_28280) | 7580..7942 | + | 363 | WP_007247606.1 | hypothetical protein | - |
| MME54_RS28285 (MME54_28285) | 7945..8172 | + | 228 | WP_004642455.1 | hypothetical protein | - |
| MME54_RS28290 (MME54_28290) | 8248..8880 | - | 633 | WP_054987853.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| MME54_RS28295 (MME54_28295) | 8987..9244 | + | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| MME54_RS28300 (MME54_28300) | 9241..9660 | + | 420 | WP_017684243.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MME54_RS28305 (MME54_28305) | 9701..10310 | + | 610 | Protein_12 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| MME54_RS28310 (MME54_28310) | 10609..11544 | + | 936 | WP_054987850.1 | AvrD family protein | - |
| MME54_RS28315 (MME54_28315) | 11885..12532 | + | 648 | WP_005746177.1 | histidine phosphatase family protein | - |
| MME54_RS28320 (MME54_28320) | 12771..13598 | + | 828 | WP_054987851.1 | TauD/TfdA family dioxygenase | - |
| MME54_RS28325 (MME54_28325) | 13616..14650 | + | 1035 | WP_054987854.1 | sulfotransferase | - |
| MME54_RS28330 (MME54_28330) | 14691..15893 | + | 1203 | WP_017684239.1 | aspartate aminotransferase family protein | - |
| MME54_RS28335 (MME54_28335) | 15930..16586 | + | 657 | WP_032609899.1 | 2OG-Fe(II) oxygenase family protein | - |
| MME54_RS28340 (MME54_28340) | 16586..17164 | + | 579 | WP_054987852.1 | AAA family ATPase | - |
| MME54_RS28345 (MME54_28345) | 17366..17602 | + | 237 | WP_017684237.1 | carbon storage regulator | - |
| MME54_RS28350 (MME54_28350) | 17671..18501 | - | 831 | Protein_21 | IS3 family transposase ISPsy24 | Transposase |
| MME54_RS28355 (MME54_28355) | 19312..19923 | + | 612 | WP_054988361.1 | Protein virC1 | VF |
| MME54_RS28360 (MME54_28360) | 19923..20135 | + | 213 | WP_031598413.1 | plasmid partition protein ParG | - |
| MME54_RS28365 (MME54_28365) | 20562..21335 | - | 774 | WP_054988360.1 | Oxygen regulatory protein NreC | VF |
| MME54_RS28370 (MME54_28370) | 21477..22580 | + | 1104 | WP_054988359.1 | polyamine ABC transporter substrate-binding protein | - |
| MME54_RS28375 (MME54_28375) | 22697..23236 | - | 540 | WP_054988358.1 | helix-turn-helix transcriptional regulator | - |
| MME54_RS28380 (MME54_28380) | 23864..24115 | + | 252 | WP_234710908.1 | hypothetical protein | - |
| MME54_RS28385 (MME54_28385) | 24126..24839 | + | 714 | WP_054988357.1 | Type IV secretion system protein virB1 | VF |
| MME54_RS28390 (MME54_28390) | 24836..25174 | + | 339 | WP_241409917.1 | conjugal transfer protein | - |
| MME54_RS28395 (MME54_28395) | 25187..25675 | + | 489 | WP_054988356.1 | VirB3 family type IV secretion system protein | - |
| MME54_RS28400 (MME54_28400) | 25578..28076 | + | 2499 | WP_241409918.1 | conjugal transfer protein | - |
| MME54_RS28405 (MME54_28405) | 28073..28759 | + | 687 | WP_241409895.1 | P-type DNA transfer protein VirB5 | - |
| MME54_RS28410 (MME54_28410) | 28792..29157 | + | 366 | WP_054984037.1 | hypothetical protein | - |
| MME54_RS28415 (MME54_28415) | 29168..30112 | + | 945 | WP_054984038.1 | type IV secretion system protein | - |
| MME54_RS28420 (MME54_28420) | 30180..30479 | + | 300 | WP_082440917.1 | conjugal transfer protein | - |
| MME54_RS28425 (MME54_28425) | 30517..31305 | + | 789 | WP_054984039.1 | Type IV secretion system protein virB8 | VF |
| MME54_RS28430 (MME54_28430) | 31295..32104 | + | 810 | WP_241409897.1 | P-type conjugative transfer protein VirB9 | - |
| MME54_RS28435 (MME54_28435) | 32091..33479 | + | 1389 | WP_241409898.1 | Type IV secretion system protein virB10 | VF |
| MME54_RS28440 (MME54_28440) | 33489..34544 | + | 1056 | WP_241409900.1 | Type IV secretion system protein VirB11 | VF |
| MME54_RS28445 (MME54_28445) | 34585..34944 | + | 360 | WP_241409902.1 | hypothetical protein | - |
| MME54_RS28450 (MME54_28450) | 34929..35294 | + | 366 | WP_004667995.1 | hypothetical protein | - |
| MME54_RS28455 (MME54_28455) | 35341..35613 | + | 273 | WP_024668652.1 | hypothetical protein | - |
| MME54_RS28460 (MME54_28460) | 35739..36636 | + | 898 | Protein_43 | ATP-binding protein | - |
| MME54_RS28465 (MME54_28465) | 36779..36982 | + | 204 | WP_241409903.1 | hypothetical protein | - |
| MME54_RS28470 (MME54_28470) | 37042..38160 | + | 1119 | WP_241409905.1 | hypothetical protein | - |
| MME54_RS28475 (MME54_28475) | 38272..38505 | + | 234 | WP_054984313.1 | hypothetical protein | - |
| MME54_RS28480 (MME54_28480) | 38505..39920 | + | 1416 | WP_241409906.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MME54_RS28485 (MME54_28485) | 40888..41299 | + | 412 | Protein_48 | DNA topoisomerase | - |
| MME54_RS28490 (MME54_28490) | 41656..41985 | + | 330 | WP_241409907.1 | hypothetical protein | - |
| MME54_RS28495 (MME54_28495) | 42089..42319 | + | 231 | WP_241409908.1 | hypothetical protein | - |
| MME54_RS28500 (MME54_28500) | 42295..42477 | - | 183 | WP_241409909.1 | hypothetical protein | - |
| MME54_RS28505 (MME54_28505) | 42642..43022 | + | 381 | WP_241409910.1 | topoisomerase C-terminal repeat-containing protein | - |
| MME54_RS28510 (MME54_28510) | 43139..43732 | + | 594 | Protein_53 | single-stranded DNA-binding protein | - |
| MME54_RS28515 (MME54_28515) | 44018..44308 | + | 291 | WP_241409911.1 | hypothetical protein | - |
| MME54_RS28520 (MME54_28520) | 44794..44964 | + | 171 | WP_241409913.1 | hypothetical protein | - |
| MME54_RS28525 (MME54_28525) | 45046..45432 | + | 387 | WP_241409915.1 | hypothetical protein | - |
| MME54_RS28530 (MME54_28530) | 45450..45857 | - | 408 | WP_015060869.1 | hypothetical protein | - |
| MME54_RS28535 (MME54_28535) | 46212..46559 | + | 348 | WP_054988011.1 | hypothetical protein | Relaxase |
| MME54_RS28540 (MME54_28540) | 47543..47962 | + | 420 | WP_054988013.1 | hypothetical protein | - |
| MME54_RS28545 (MME54_28545) | 48301..50343 | + | 2043 | WP_054988015.1 | hypothetical protein | - |
| MME54_RS28550 (MME54_28550) | 50469..50897 | + | 429 | WP_054988014.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|