MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 62612 bp
Accession: NZ_CP092920 Location: 1..62612 Organism: Pseudomonas syringae pv. helianthi strain LMG 5067 Replicon: plasmid pHelB
Accession: NZ_CP092920 Location: 1..62612 Organism: Pseudomonas syringae pv. helianthi strain LMG 5067 Replicon: plasmid pHelB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MME54_RS27890 (MME54_27890) | 1..1314 | + | 1314 | WP_054987855.1 | replication initiation protein | - |
| MME54_RS27895 (MME54_27895) | 1474..1641 | + | 168 | WP_241409890.1 | hypothetical protein | - |
| MME54_RS27900 (MME54_27900) | 1744..2952 | - | 1209 | WP_234696675.1 | IS91 family transposase IS801 | Transposase |
| MME54_RS27905 (MME54_27905) | 2954..3235 | - | 282 | WP_054987098.1 | hypothetical protein | - |
| MME54_RS27910 (MME54_27910) | 3305..3655 | + | 351 | WP_241409892.1 | hypothetical protein | - |
| MME54_RS27915 (MME54_27915) | 3748..3966 | + | 219 | WP_054983991.1 | carbon storage regulator | - |
| MME54_RS27920 (MME54_27920) | 4167..5183 | - | 1017 | WP_054983992.1 | tyrosine protein phosphatase | - |
| MME54_RS27925 (MME54_27925) | 5645..6592 | - | 948 | WP_054984033.1 | hypothetical protein | - |
| MME54_RS27930 (MME54_27930) | 6673..6954 | - | 282 | WP_054983993.1 | hypothetical protein | - |
| MME54_RS27935 (MME54_27935) | 6954..7637 | - | 684 | WP_002556051.1 | AAA family ATPase | - |
| MME54_RS27940 (MME54_27940) | 7962..8162 | + | 201 | Protein_10 | TraR/DksA family transcriptional regulator | - |
| MME54_RS27945 (MME54_27945) | 8257..8478 | + | 222 | WP_054983995.1 | hypothetical protein | - |
| MME54_RS27950 (MME54_27950) | 8804..9424 | - | 621 | WP_054983997.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| MME54_RS27955 (MME54_27955) | 9835..10398 | - | 564 | WP_010204552.1 | hypothetical protein | - |
| MME54_RS27960 (MME54_27960) | 10487..10756 | + | 270 | WP_054983998.1 | helix-turn-helix transcriptional regulator | - |
| MME54_RS27965 (MME54_27965) | 10818..11258 | + | 441 | WP_054983999.1 | TrfB-related DNA-binding protein | - |
| MME54_RS27970 (MME54_27970) | 11692..12069 | + | 378 | WP_007247501.1 | hypothetical protein | - |
| MME54_RS27975 (MME54_27975) | 12116..12952 | + | 837 | WP_054984000.1 | DUF932 domain-containing protein | - |
| MME54_RS27980 (MME54_27980) | 13010..13198 | + | 189 | WP_054984001.1 | hypothetical protein | - |
| MME54_RS27985 (MME54_27985) | 13272..13550 | - | 279 | WP_054984034.1 | mobilization protein | - |
| MME54_RS27990 (MME54_27990) | 13995..14324 | + | 330 | WP_003344297.1 | plasmid mobilization protein MobA | - |
| MME54_RS27995 (MME54_27995) | 14335..16287 | + | 1953 | WP_054984002.1 | Protein TraI | Relaxase |
| MME54_RS28000 (MME54_28000) | 16339..16648 | - | 310 | Protein_22 | integrase | - |
| MME54_RS28005 (MME54_28005) | 16835..17055 | - | 221 | Protein_23 | hypothetical protein | - |
| MME54_RS28010 (MME54_28010) | 17125..19278 | - | 2154 | WP_082440913.1 | XopB/HopD1 family type III secretion system effector | - |
| MME54_RS28015 (MME54_28015) | 19848..20471 | - | 624 | WP_054984005.1 | glycoside hydrolase family 25 protein | - |
| MME54_RS28020 (MME54_28020) | 21271..22452 | - | 1182 | WP_054984006.1 | glycoside hydrolase family 10 protein | - |
| MME54_RS28025 (MME54_28025) | 22532..23827 | - | 1296 | WP_054984007.1 | glycoside hydrolase family 68 protein | - |
| MME54_RS28030 (MME54_28030) | 23839..24024 | - | 186 | WP_024420279.1 | Com family DNA-binding transcriptional regulator | - |
| MME54_RS28035 (MME54_28035) | 24628..24864 | + | 237 | Protein_29 | tyrosine-type recombinase/integrase | - |
| MME54_RS28040 (MME54_28040) | 25021..25521 | + | 501 | WP_054071650.1 | Protein hcp1 | VF |
| MME54_RS28045 (MME54_28045) | 25546..26073 | + | 528 | WP_019331484.1 | DUF2778 domain-containing protein | - |
| MME54_RS28050 (MME54_28050) | 26583..27464 | - | 882 | WP_054984009.1 | HTH-type transcriptional regulator GltC | VF |
| MME54_RS28055 (MME54_28055) | 27754..29085 | + | 1332 | WP_054984010.1 | MFS transporter | - |
| MME54_RS28060 (MME54_28060) | 29283..29474 | + | 192 | WP_147470799.1 | hypothetical protein | - |
| MME54_RS28065 (MME54_28065) | 29493..29849 | - | 357 | WP_054071648.1 | helix-turn-helix transcriptional regulator | - |
| MME54_RS28070 (MME54_28070) | 30093..30626 | + | 534 | WP_005769797.1 | transcription termination/antitermination NusG family protein | - |
| MME54_RS28075 (MME54_28075) | 30715..30924 | + | 210 | WP_003344343.1 | hypothetical protein | - |
| MME54_RS28080 (MME54_28080) | 31217..31708 | + | 492 | WP_054984011.1 | hypothetical protein | VF |
| MME54_RS28085 (MME54_28085) | 31745..32218 | + | 474 | WP_005759124.1 | DotD/TraH family lipoprotein | - |
| MME54_RS28090 (MME54_28090) | 32215..33015 | + | 801 | WP_054984012.1 | hypothetical protein | VF |
| MME54_RS28095 (MME54_28095) | 33012..34190 | + | 1179 | WP_054984013.1 | Twitching mobility protein | VF |
| MME54_RS28100 (MME54_28100) | 34222..34455 | + | 234 | WP_004644386.1 | hypothetical protein | - |
| MME54_RS28105 (MME54_28105) | 34493..34741 | + | 249 | WP_054984014.1 | hypothetical protein | - |
| MME54_RS28110 (MME54_28110) | 34943..35494 | + | 552 | WP_054984015.1 | Phospholipase D | VF |
| MME54_RS28115 (MME54_28115) | 35805..36092 | + | 288 | WP_054984017.1 | IcmT/TraK family protein | - |
| MME54_RS28120 (MME54_28120) | 36135..40577 | + | 4443 | WP_054984018.1 | DUF5710 domain-containing protein | - |
| MME54_RS28125 (MME54_28125) | 40603..40956 | + | 354 | WP_005622158.1 | conjugal transfer protein | - |
| MME54_RS28130 (MME54_28130) | 40953..41660 | + | 708 | WP_054984019.1 | DotI/IcmL family type IV secretion protein | - |
| MME54_RS28135 (MME54_28135) | 41717..42775 | + | 1059 | WP_081023433.1 | hypothetical protein | VF |
| MME54_RS28140 (MME54_28140) | 42781..44139 | + | 1359 | WP_054984020.1 | conjugal transfer protein TraO | - |
| MME54_RS28145 (MME54_28145) | 44136..44846 | + | 711 | WP_054984021.1 | conjugal transfer protein TraP | - |
| MME54_RS28150 (MME54_28150) | 44855..45397 | + | 543 | WP_054984022.1 | conjugal transfer protein TraQ | - |
| MME54_RS28155 (MME54_28155) | 45473..45859 | + | 387 | WP_054984023.1 | hypothetical protein | - |
| MME54_RS28160 (MME54_28160) | 45903..46178 | - | 276 | WP_054072925.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MME54_RS28165 (MME54_28165) | 46156..46356 | - | 201 | WP_005622172.1 | hypothetical protein | - |
| MME54_RS28170 (MME54_28170) | 46541..47200 | + | 660 | WP_054984024.1 | hypothetical protein | - |
| MME54_RS28175 (MME54_28175) | 47175..50231 | + | 3057 | WP_054984025.1 | conjugal transfer protein | - |
| MME54_RS28180 (MME54_28180) | 50242..51456 | + | 1215 | WP_054984035.1 | conjugal transfer protein TraW | - |
| MME54_RS28185 (MME54_28185) | 51446..52024 | + | 579 | WP_053486700.1 | conjugal transfer protein TraX | - |
| MME54_RS28190 (MME54_28190) | 52155..54299 | + | 2145 | WP_054984026.1 | hypothetical protein | VF |
| MME54_RS28195 (MME54_28195) | 54286..54945 | + | 660 | WP_054984036.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| MME54_RS28200 (MME54_28200) | 55038..56240 | + | 1203 | WP_054984027.1 | hypothetical protein | - |
| MME54_RS28205 (MME54_28205) | 56230..56607 | - | 378 | WP_003344395.1 | PIN domain-containing protein | Toxin Detail |
| MME54_RS28210 (MME54_28210) | 56604..56804 | - | 201 | WP_004644067.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| MME54_RS28215 (MME54_28215) | 56897..57982 | + | 1086 | WP_054984028.1 | thioredoxin fold domain-containing protein | - |
| MME54_RS28220 (MME54_28220) | 57969..60257 | + | 2289 | WP_054984029.1 | F-type conjugative transfer protein TrbC | - |
| MME54_RS28225 (MME54_28225) | 60390..60707 | + | 318 | WP_241409888.1 | hypothetical protein | - |
| MME54_RS28230 (MME54_28230) | 60728..61291 | + | 564 | WP_054984031.1 | hypothetical protein | - |
| MME54_RS28235 (MME54_28235) | 61480..61908 | + | 429 | WP_005740363.1 | GntR family transcriptional regulator | - |
| MME54_RS28240 (MME54_28240) | 61987..62214 | + | 228 | WP_054984032.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|