MGE detailed information
MGE type: Genomic_island MGE length: 39035 bp
Accession: NZ_CP092918 Location: 639679..678713 Organism: Pseudomonas syringae pv. helianthi strain LMG 5067 Replicon: chromosome
Accession: NZ_CP092918 Location: 639679..678713 Organism: Pseudomonas syringae pv. helianthi strain LMG 5067 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MME54_RS02735 (MME54_02735) | 634830..635150 | + | 321 | WP_054987009.1 | hypothetical protein | - |
| MME54_RS02740 (MME54_02740) | 635150..636925 | + | 1776 | WP_054987010.1 | hypothetical protein | - |
| MME54_RS02745 (MME54_02745) | 636922..637527 | + | 606 | WP_054987011.1 | hypothetical protein | - |
| MME54_RS02750 (MME54_02750) | 637582..638625 | + | 1044 | WP_054987012.1 | WavE lipopolysaccharide synthesis family protein | - |
| MME54_RS02755 (MME54_02755) | 638656..638901 | - | 246 | WP_054987013.1 | helix-turn-helix transcriptional regulator | - |
| MME54_RS02760 (MME54_02760) | 639023..639385 | + | 363 | WP_241409747.1 | hypothetical protein | - |
| MME54_RS02765 (MME54_02765) | 639679..640767 | - | 1089 | WP_054987014.1 | macro domain-containing protein | Antitoxin Detail |
| MME54_RS02770 (MME54_02770) | 640764..641408 | - | 645 | WP_054987015.1 | DUF4433 domain-containing protein | Toxin Detail |
| MME54_RS02775 (MME54_02775) | 641405..641986 | - | 582 | WP_054987016.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| MME54_RS02780 (MME54_02780) | 642985..643923 | + | 939 | WP_054987025.1 | DUF4007 family protein | - |
| MME54_RS02785 (MME54_02785) | 643910..647254 | + | 3345 | WP_054987017.1 | hypothetical protein | - |
| MME54_RS02790 (MME54_02790) | 647251..648093 | + | 843 | WP_054987018.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| MME54_RS02795 (MME54_02795) | 648081..648740 | + | 660 | WP_149036736.1 | hypothetical protein | - |
| MME54_RS02800 (MME54_02800) | 648742..650913 | + | 2172 | WP_054987020.1 | DNA sulfur modification protein DndB | - |
| MME54_RS02805 (MME54_02805) | 651007..651342 | - | 336 | WP_054987021.1 | hypothetical protein | - |
| MME54_RS02810 (MME54_02810) | 651370..651561 | - | 192 | WP_054987022.1 | hypothetical protein | - |
| MME54_RS02815 (MME54_02815) | 651897..652670 | - | 774 | Protein_557 | IS3 family transposase ISPpu22 | Transposase |
| MME54_RS02825 (MME54_02825) | 653882..654073 | + | 192 | WP_241409748.1 | AlpA family phage regulatory protein | - |
| MME54_RS02830 (MME54_02830) | 654317..655153 | + | 837 | WP_054986524.1 | inovirus-type Gp2 protein | - |
| MME54_RS02835 (MME54_02835) | 655430..656218 | - | 789 | WP_054986525.1 | hypothetical protein | - |
| MME54_RS02840 (MME54_02840) | 656466..656810 | - | 345 | WP_054986526.1 | hypothetical protein | - |
| MME54_RS02845 (MME54_02845) | 656821..660999 | - | 4179 | WP_241409749.1 | RHS repeat-associated core domain-containing protein | - |
| MME54_RS02850 (MME54_02850) | 661003..661467 | - | 465 | WP_054987806.1 | DUF1795 domain-containing protein | - |
| MME54_RS02855 (MME54_02855) | 661499..662080 | - | 582 | WP_054987805.1 | hypothetical protein | - |
| MME54_RS02860 (MME54_02860) | 662082..663941 | - | 1860 | WP_054987804.1 | Actin cross-linking toxin VgrG1 | VF |
| MME54_RS02865 (MME54_02865) | 664119..665132 | + | 1014 | WP_149036753.1 | hypothetical protein | - |
| MME54_RS02870 (MME54_02870) | 665129..665683 | + | 555 | WP_054987802.1 | hypothetical protein | - |
| MME54_RS02875 (MME54_02875) | 665825..666104 | - | 280 | Protein_569 | transposase | - |
| MME54_RS02880 (MME54_02880) | 666191..666339 | - | 149 | Protein_570 | transposase | - |
| MME54_RS02885 (MME54_02885) | 666698..667860 | + | 1163 | WP_103715205.1 | IS3 family transposase ISPsy24 | Transposase |
| MME54_RS02890 (MME54_02890) | 668015..668995 | + | 981 | WP_054984738.1 | IS5 family transposase ISPa41 | Transposase |
| MME54_RS02895 (MME54_02895) | 669234..670448 | - | 1215 | WP_054984739.1 | Prophage integrase IntA ; Integrase | Integrase |
| MME54_RS02900 (MME54_02900) | 670851..671582 | - | 732 | WP_054984740.1 | XRE family transcriptional regulator | - |
| MME54_RS02905 (MME54_02905) | 671940..672467 | - | 528 | WP_054984741.1 | inorganic diphosphatase | - |
| MME54_RS02910 (MME54_02910) | 672578..673387 | - | 810 | WP_054984742.1 | zinc-dependent peptidase | - |
| MME54_RS02915 (MME54_02915) | 673391..674038 | - | 648 | WP_054984743.1 | DedA family protein | - |
| MME54_RS02920 (MME54_02920) | 674230..674688 | - | 459 | WP_054984744.1 | GNAT family N-acetyltransferase | - |
| MME54_RS02925 (MME54_02925) | 674772..675620 | - | 849 | WP_162491713.1 | ethanolamine ammonia-lyase subunit EutC | - |
| MME54_RS02930 (MME54_02930) | 675632..677026 | - | 1395 | WP_054984746.1 | ethanolamine ammonia-lyase subunit EutB | - |
| MME54_RS02935 (MME54_02935) | 678834..680354 | - | 1521 | WP_054986867.1 | aldehyde dehydrogenase family protein | - |
| MME54_RS02940 (MME54_02940) | 680580..681929 | + | 1350 | WP_054986868.1 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | - |
| MME54_RS02945 (MME54_02945) | 681926..682555 | + | 630 | WP_054986869.1 | flavin prenyltransferase UbiX | - |
| MME54_RS02950 (MME54_02950) | 682548..682832 | + | 285 | WP_054986886.1 | YceK/YidQ family lipoprotein | - |
| MME54_RS02955 (MME54_02955) | 683011..683652 | - | 642 | WP_054986870.1 | oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|