MGE detailed information
MGE type: Conjugative plasmid MGE length: 88258 bp
Accession: NZ_CP092912 Location: 1..88258 Organism: Salmonella enterica subsp. enterica strain SR33 Replicon: plasmid pNDM13-SR33
Accession: NZ_CP092912 Location: 1..88258 Organism: Salmonella enterica subsp. enterica strain SR33 Replicon: plasmid pNDM13-SR33
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MLD58_RS24035 (46) | 46..1077 | + | 1032 | WP_000907852.1 | plasmid replication initiator RepA | - |
| MLD58_RS24040 (1981) | 1981..2265 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| MLD58_RS24045 (2265) | 2265..2540 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MLD58_RS24050 (2646) | 2646..2927 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| MLD58_RS24055 (3119) | 3119..3385 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| MLD58_RS24060 (3385) | 3385..3879 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| MLD58_RS24065 (3935) | 3935..4537 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| MLD58_RS24070 (5125) | 5125..6324 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| MLD58_RS24075 (6334) | 6334..6522 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| MLD58_RS24080 (6786) | 6786..7598 | + | 813 | WP_063860856.1 | Metallo-beta-lactamase type 2 | ARG |
| MLD58_RS24085 (7602) | 7602..7967 | + | 366 | WP_241420307.1 | bleomycin binding protein Ble-MBL | - |
| MLD58_RS24090 (7972) | 7972..8622 | + | 651 | WP_193793434.1 | phosphoribosylanthranilate isomerase | - |
| MLD58_RS24095 (9629) | 9629..10219 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| MLD58_RS24100 (10219) | 10219..10473 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| MLD58_RS24105 (11041) | 11041..11454 | + | 414 | WP_021513973.1 | hypothetical protein | - |
| MLD58_RS24110 (11456) | 11456..12235 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| MLD58_RS24115 (12415) | 12415..13059 | + | 645 | WP_001144036.1 | ParA family protein | - |
| MLD58_RS24120 (13146) | 13146..13454 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| MLD58_RS24125 (13868) | 13868..14848 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| MLD58_RS24130 (14841) | 14841..15257 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| MLD58_RS24135 (15259) | 15259..16533 | - | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| MLD58_RS24140 (16533) | 16533..16970 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MLD58_RS24145 (16967) | 16967..17215 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| MLD58_RS24150 (17633) | 17633..18535 | + | 903 | WP_001442863.1 | DUF1281 domain-containing protein | - |
| MLD58_RS24155 (18539) | 18539..18844 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| MLD58_RS24160 (18920) | 18920..19603 | + | 684 | WP_021513974.1 | DNA methylase | - |
| MLD58_RS24165 (19604) | 19604..19825 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| MLD58_RS24170 (19806) | 19806..20272 | + | 467 | Protein_27 | DUF1380 family protein | - |
| MLD58_RS24175 (20323) | 20323..21093 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| MLD58_RS24180 (21510) | 21510..21935 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| MLD58_RS24185 (21982) | 21982..22404 | + | 423 | WP_000271747.1 | DUF1380 family protein | - |
| MLD58_RS24190 (22401) | 22401..22592 | + | 192 | WP_065809483.1 | hypothetical protein | - |
| MLD58_RS24195 (22664) | 22664..22978 | + | 315 | WP_024184663.1 | hypothetical protein | - |
| MLD58_RS24200 (23362) | 23362..23889 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| MLD58_RS24205 (23947) | 23947..24180 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| MLD58_RS24210 (24239) | 24239..26197 | + | 1959 | WP_057517088.1 | ParB/RepB/Spo0J family partition protein | - |
| MLD58_RS24215 (26252) | 26252..26686 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| MLD58_RS24220 (26683) | 26683..27402 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| MLD58_RS24225 (27399) | 27399..27995 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| MLD58_RS24230 (28458) | 28458..28958 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| MLD58_RS24235 (29687) | 29687..30121 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| MLD58_RS24240 (30214) | 30214..30480 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| MLD58_RS24245 (30545) | 30545..31435 | + | 891 | WP_000038399.1 | Recombination-promoting nuclease RpnA | VF |
| MLD58_RS24250 (31498) | 31498..31692 | + | 195 | WP_001496986.1 | hypothetical protein | - |
| MLD58_RS24255 (31723) | 31723..31974 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| MLD58_RS24260 (32555) | 32555..33403 | + | 849 | WP_021513954.1 | DUF4942 domain-containing protein | - |
| MLD58_RS24265 (33488) | 33488..33823 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| MLD58_RS24270 (34057) | 34057..34389 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| MLD58_RS24275 (34400) | 34400..37099 | + | 2700 | WP_071447698.1 | Protein TraI | Relaxase |
| MLD58_RS24280 (37136) | 37136..39427 | - | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| MLD58_RS24285 (39420) | 39420..40490 | - | 1071 | WP_241420308.1 | IncI1-type conjugal transfer protein TrbB | - |
| MLD58_RS24290 (40509) | 40509..41717 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| MLD58_RS24295 (41935) | 41935..42888 | - | 954 | WP_021513958.1 | hypothetical protein | - |
| - (43082) | 43082..43139 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (43082) | 43082..43139 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (43082) | 43082..43139 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (43082) | 43082..43139 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| MLD58_RS24300 (43194) | 43194..43346 | + | 153 | WP_193793440.1 | Hok/Gef family protein | Toxin Detail |
| MLD58_RS24305 (43418) | 43418..43669 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| MLD58_RS24980 (44168) | 44168..44263 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| MLD58_RS24315 (44328) | 44328..44504 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| MLD58_RS24320 (44836) | 44836..45045 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| MLD58_RS24325 (45117) | 45117..45779 | - | 663 | WP_193793429.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| MLD58_RS24330 (45844) | 45844..48012 | - | 2169 | WP_000698366.1 | DotA/TraY family protein | - |
| MLD58_RS24335 (48109) | 48109..48693 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| MLD58_RS24340 (48722) | 48722..49924 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| MLD58_RS24345 (49891) | 49891..50505 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| MLD58_RS24350 (50505) | 50505..53549 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| MLD58_RS24355 (53639) | 53639..54439 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| MLD58_RS24360 (54423) | 54423..54611 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| MLD58_RS24365 (54675) | 54675..55079 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| MLD58_RS24370 (55130) | 55130..55657 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| MLD58_RS24375 (55657) | 55657..56361 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| MLD58_RS24380 (56361) | 56361..57650 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| MLD58_RS24385 (57653) | 57653..58636 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| MLD58_RS24390 (58647) | 58647..59339 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| MLD58_RS24395 (59336) | 59336..59683 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| MLD58_RS24400 (59701) | 59701..63468 | - | 3768 | WP_057517056.1 | DUF5710 domain-containing protein | - |
| MLD58_RS24405 (63558) | 63558..64109 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| MLD58_RS24410 (64124) | 64124..64414 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| MLD58_RS24415 (64411) | 64411..65559 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| MLD58_RS24420 (65556) | 65556..66374 | - | 819 | WP_193793431.1 | hypothetical protein | VF |
| MLD58_RS24425 (66371) | 66371..66829 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| MLD58_RS24430 (67224) | 67224..67808 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| MLD58_RS24435 (67868) | 67868..69070 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| MLD58_RS24440 (69156) | 69156..69980 | - | 825 | WP_057517055.1 | conjugal transfer protein TraE | - |
| MLD58_RS24445 (70131) | 70131..71285 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| MLD58_RS24450 (72918) | 72918..74354 | - | 1437 | WP_015058913.1 | hypothetical protein | VF |
| MLD58_RS24455 (74342) | 74342..74998 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| MLD58_RS24460 (74983) | 74983..75543 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| MLD58_RS24465 (75553) | 75553..76167 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| MLD58_RS24470 (76184) | 76184..77269 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| MLD58_RS24475 (77282) | 77282..78835 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| MLD58_RS24480 (78846) | 78846..79298 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| MLD58_RS24485 (79285) | 79285..80580 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| MLD58_RS24490 (80573) | 80573..82255 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| MLD58_RS24495 (82269) | 82269..82706 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| MLD58_RS24500 (82706) | 82706..83773 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| MLD58_RS24505 (84525) | 84525..84779 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| MLD58_RS24510 (84951) | 84951..85634 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| MLD58_RS24515 (85888) | 85888..86421 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| MLD58_RS24520 (86863) | 86863..87150 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| MLD58_RS24525 (87068) | 87068..87298 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|