MGE detailed information
MGE type: Prophage MGE length: 24604 bp
Accession: NZ_CP092827 Location: 3891414..3916017 Organism: Pseudomonas sp. LS.1a Replicon: chromosome
Accession: NZ_CP092827 Location: 3891414..3916017 Organism: Pseudomonas sp. LS.1a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKK04_RS18070 (MKK04_18070) | 3886422..3888275 | + | 1854 | WP_025339925.1 | NADH-quinone oxidoreductase subunit L | - |
| MKK04_RS18075 (MKK04_18075) | 3888325..3889857 | + | 1533 | WP_207831024.1 | NADH-quinone oxidoreductase subunit M | - |
| MKK04_RS18080 (MKK04_18080) | 3889865..3891334 | + | 1470 | WP_025339926.1 | NADH-quinone oxidoreductase subunit NuoN | - |
| MKK04_RS18085 (MKK04_18085) | 3891414..3891677 | - | 264 | WP_207831280.1 | ogr/Delta-like zinc finger family protein | - |
| MKK04_RS18090 (MKK04_18090) | 3891878..3892270 | + | 393 | WP_207831022.1 | helix-turn-helix domain-containing protein | - |
| MKK04_RS18095 (MKK04_18095) | 3892267..3892629 | - | 363 | WP_207831020.1 | hypothetical protein | - |
| MKK04_RS18100 (MKK04_18100) | 3892622..3892969 | - | 348 | WP_207831019.1 | head completion/stabilization protein | - |
| MKK04_RS18105 (MKK04_18105) | 3892979..3893227 | - | 249 | WP_063912679.1 | Transcriptional activator protein LasR | VF |
| MKK04_RS18110 (MKK04_18110) | 3893448..3895511 | + | 2064 | WP_241105856.1 | TonB-dependent receptor | - |
| MKK04_RS18115 (MKK04_18115) | 3895568..3896125 | - | 558 | WP_207831015.1 | NAD(P)H-dependent oxidoreductase | - |
| MKK04_RS18120 (MKK04_18120) | 3896283..3896501 | + | 219 | WP_207831012.1 | hypothetical protein | - |
| MKK04_RS18125 (MKK04_18125) | 3896485..3898734 | - | 2250 | WP_233693794.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| MKK04_RS18130 (MKK04_18130) | 3898910..3899668 | - | 759 | WP_063912683.1 | DNA polymerase III subunit epsilon | - |
| MKK04_RS18135 (MKK04_18135) | 3899720..3900166 | - | 447 | WP_016711609.1 | ribonuclease HI | - |
| MKK04_RS18140 (MKK04_18140) | 3900180..3900953 | - | 774 | WP_207831006.1 | methyltransferase domain-containing protein | - |
| MKK04_RS18145 (MKK04_18145) | 3901039..3901818 | + | 780 | WP_233686948.1 | hydroxyacylglutathione hydrolase | - |
| MKK04_RS18150 (MKK04_18150) | 3901919..3903349 | + | 1431 | WP_207830999.1 | Membrane-bound lytic murein transglycosylase D | VF |
| MKK04_RS18155 (MKK04_18155) | 3903628..3905457 | + | 1830 | WP_233686949.1 | extracellular solute-binding protein | - |
| MKK04_RS18160 (MKK04_18160) | 3905454..3907289 | + | 1836 | WP_241105857.1 | extracellular solute-binding protein | - |
| MKK04_RS18165 (MKK04_18165) | 3907291..3908364 | + | 1074 | WP_009686399.1 | microcin C ABC transporter permease YejB | - |
| MKK04_RS18170 (MKK04_18170) | 3908366..3909385 | + | 1020 | WP_063912689.1 | ABC transporter permease | - |
| MKK04_RS18175 (MKK04_18175) | 3909387..3910997 | + | 1611 | WP_063912690.1 | putative ABC transporter ATP-binding protein YejF | VF |
| MKK04_RS18180 (MKK04_18180) | 3911229..3911792 | + | 564 | WP_233686993.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| MKK04_RS18185 (MKK04_18185) | 3911857..3912423 | + | 567 | WP_241105859.1 | HD domain-containing protein | Toxin Detail |
| MKK04_RS18190 (MKK04_18190) | 3912420..3912878 | - | 459 | WP_207831272.1 | hypothetical protein | - |
| MKK04_RS18195 (MKK04_18195) | 3913087..3916017 | + | 2931 | WP_241105860.1 | aminotransferase | - |
| MKK04_RS18200 (MKK04_18200) | 3916381..3917286 | + | 906 | WP_241105861.1 | LysR family transcriptional regulator | - |
| MKK04_RS18205 (MKK04_18205) | 3917446..3918141 | - | 696 | WP_207830990.1 | response regulator | - |
| MKK04_RS18210 (MKK04_18210) | 3918138..3920792 | - | 2655 | WP_207830988.1 | sensor histidine kinase KdpD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|