MGE detailed information
MGE type: Prophage MGE length: 71222 bp
Accession: NZ_CP092827 Location: 3563130..3634351 Organism: Pseudomonas sp. LS.1a Replicon: chromosome
Accession: NZ_CP092827 Location: 3563130..3634351 Organism: Pseudomonas sp. LS.1a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKK04_RS16305 (MKK04_16305) | 3559768..3561192 | + | 1425 | WP_135001994.1 | DNA (cytosine-5-)-methyltransferase | - |
| MKK04_RS16310 (MKK04_16310) | 3561225..3561695 | + | 471 | WP_272493111.1 | very short patch repair endonuclease | - |
| MKK04_RS16315 (MKK04_16315) | 3561811..3562980 | - | 1170 | WP_241105688.1 | type II restriction endonuclease | - |
| MKK04_RS16320 (MKK04_16320) | 3563130..3563888 | + | 759 | WP_241105689.1 | HNH endonuclease signature motif containing protein | - |
| MKK04_RS16325 (MKK04_16325) | 3564399..3564536 | + | 138 | WP_241105690.1 | hypothetical protein | - |
| MKK04_RS16330 (MKK04_16330) | 3564832..3565038 | - | 207 | WP_241105691.1 | hypothetical protein | - |
| MKK04_RS16335 (MKK04_16335) | 3565028..3565336 | - | 309 | WP_044047026.1 | hypothetical protein | - |
| MKK04_RS16340 (MKK04_16340) | 3565456..3565662 | - | 207 | WP_241105692.1 | hypothetical protein | - |
| MKK04_RS16345 (MKK04_16345) | 3565686..3565898 | - | 213 | WP_241105693.1 | hypothetical protein | - |
| MKK04_RS16350 (MKK04_16350) | 3565941..3566453 | - | 513 | WP_241105694.1 | DUF2514 family protein | - |
| MKK04_RS16355 (MKK04_16355) | 3566450..3566938 | - | 489 | WP_241105695.1 | glycoside hydrolase family 104 protein | - |
| MKK04_RS16360 (MKK04_16360) | 3566984..3569011 | + | 2028 | WP_241105696.1 | O-acetyltransferase OatA | VF |
| MKK04_RS16365 (MKK04_16365) | 3569092..3571503 | - | 2412 | WP_241105697.1 | hypothetical protein | - |
| MKK04_RS16370 (MKK04_16370) | 3571541..3574594 | - | 3054 | WP_241105698.1 | host specificity factor TipJ family phage tail protein | - |
| MKK04_RS16375 (MKK04_16375) | 3574591..3574968 | - | 378 | WP_241105699.1 | hypothetical protein | - |
| MKK04_RS16380 (MKK04_16380) | 3574971..3575450 | - | 480 | WP_241105700.1 | DUF1833 family protein | - |
| MKK04_RS16385 (MKK04_16385) | 3575447..3575917 | - | 471 | WP_241105701.1 | transposase | - |
| MKK04_RS16390 (MKK04_16390) | 3575945..3576088 | - | 144 | WP_241105702.1 | hypothetical protein | - |
| MKK04_RS16395 (MKK04_16395) | 3576116..3578941 | - | 2826 | WP_241105703.1 | phage tail length tape measure family protein | - |
| MKK04_RS16400 (MKK04_16400) | 3579318..3579803 | - | 486 | WP_241105704.1 | hypothetical protein | - |
| MKK04_RS16405 (MKK04_16405) | 3579861..3581030 | - | 1170 | WP_241105705.1 | hypothetical protein | VF |
| MKK04_RS16410 (MKK04_16410) | 3581090..3581497 | - | 408 | WP_241105706.1 | phage tail terminator-like protein | - |
| MKK04_RS16415 (MKK04_16415) | 3581494..3581880 | - | 387 | WP_241105707.1 | HK97 gp10 family phage protein | - |
| MKK04_RS16420 (MKK04_16420) | 3581883..3582266 | - | 384 | WP_241105708.1 | glutamate 5-kinase | - |
| MKK04_RS16425 (MKK04_16425) | 3582268..3582639 | - | 372 | WP_241105709.1 | hypothetical protein | - |
| MKK04_RS16430 (MKK04_16430) | 3582639..3582965 | - | 327 | WP_241105710.1 | HeH/LEM domain-containing protein | - |
| MKK04_RS16435 (MKK04_16435) | 3583013..3584176 | - | 1164 | WP_241105711.1 | P22 phage major capsid protein family protein | - |
| MKK04_RS16440 (MKK04_16440) | 3584275..3585039 | - | 765 | WP_241105712.1 | hypothetical protein | - |
| MKK04_RS16445 (MKK04_16445) | 3585188..3586264 | - | 1077 | WP_241105713.1 | hypothetical protein | - |
| MKK04_RS16450 (MKK04_16450) | 3586264..3587643 | - | 1380 | WP_241105714.1 | DUF4055 domain-containing protein | - |
| MKK04_RS16455 (MKK04_16455) | 3587646..3588926 | - | 1281 | WP_241105715.1 | terminase family protein | - |
| MKK04_RS16460 (MKK04_16460) | 3588901..3589548 | - | 648 | WP_241105717.1 | terminase small subunit | - |
| MKK04_RS16465 (MKK04_16465) | 3590018..3590287 | - | 270 | WP_241105718.1 | hypothetical protein | - |
| MKK04_RS16470 (MKK04_16470) | 3590287..3590598 | - | 312 | WP_016711287.1 | hypothetical protein | - |
| MKK04_RS16475 (MKK04_16475) | 3590693..3590878 | + | 186 | WP_241105720.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| MKK04_RS16480 (MKK04_16480) | 3590924..3591346 | + | 423 | WP_241105721.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| MKK04_RS16485 (MKK04_16485) | 3591713..3592249 | - | 537 | WP_241105722.1 | hypothetical protein | - |
| MKK04_RS26505 | 3592246..3592368 | - | 123 | WP_272493113.1 | hypothetical protein | - |
| MKK04_RS16490 (MKK04_16490) | 3592365..3592724 | - | 360 | WP_241105723.1 | endodeoxyribonuclease RusA | - |
| MKK04_RS16495 (MKK04_16495) | 3592721..3593023 | - | 303 | WP_241105724.1 | DUF1364 family protein | - |
| MKK04_RS16500 (MKK04_16500) | 3593014..3593337 | - | 324 | WP_241105725.1 | hypothetical protein | - |
| MKK04_RS16505 (MKK04_16505) | 3593334..3593804 | - | 471 | WP_241105726.1 | hypothetical protein | - |
| MKK04_RS16510 (MKK04_16510) | 3593801..3594019 | - | 219 | WP_241105727.1 | hypothetical protein | - |
| MKK04_RS16515 (MKK04_16515) | 3594016..3594777 | - | 762 | WP_241105728.1 | replication protein P | - |
| MKK04_RS16520 (MKK04_16520) | 3594774..3595517 | - | 744 | WP_241105729.1 | helix-turn-helix domain-containing protein | - |
| MKK04_RS16525 (MKK04_16525) | 3595514..3595984 | - | 471 | WP_241105730.1 | hypothetical protein | - |
| MKK04_RS16530 (MKK04_16530) | 3595981..3596835 | - | 855 | WP_241105731.1 | Rha family transcriptional regulator | - |
| MKK04_RS16535 (MKK04_16535) | 3596935..3597147 | - | 213 | WP_014859733.1 | hypothetical protein | - |
| MKK04_RS16540 (MKK04_16540) | 3597166..3597375 | - | 210 | WP_014859732.1 | hypothetical protein | - |
| MKK04_RS16545 (MKK04_16545) | 3597405..3597602 | - | 198 | WP_197843788.1 | Cro/CI family transcriptional regulator | - |
| MKK04_RS16550 (MKK04_16550) | 3597719..3598513 | + | 795 | WP_241105732.1 | LexA family transcriptional regulator | - |
| MKK04_RS16555 (MKK04_16555) | 3599319..3599831 | + | 513 | WP_241105733.1 | hypothetical protein | - |
| MKK04_RS16560 (MKK04_16560) | 3599933..3600241 | + | 309 | WP_241105734.1 | outer membrane protein assembly factor BamE | - |
| MKK04_RS16565 (MKK04_16565) | 3600292..3601119 | - | 828 | WP_241105735.1 | hypothetical protein | - |
| MKK04_RS16570 (MKK04_16570) | 3601832..3602041 | + | 210 | WP_241105736.1 | hypothetical protein | - |
| MKK04_RS16575 (MKK04_16575) | 3602064..3602321 | + | 258 | WP_241105737.1 | hypothetical protein | - |
| MKK04_RS16580 (MKK04_16580) | 3602352..3602591 | + | 240 | WP_241105738.1 | hypothetical protein | - |
| MKK04_RS16585 (MKK04_16585) | 3603087..3603251 | + | 165 | WP_155950787.1 | hypothetical protein | - |
| MKK04_RS16590 (MKK04_16590) | 3603437..3603715 | + | 279 | WP_241105739.1 | hypothetical protein | - |
| MKK04_RS16595 (MKK04_16595) | 3603966..3604382 | + | 417 | WP_241105740.1 | hypothetical protein | - |
| MKK04_RS16600 (MKK04_16600) | 3604379..3604582 | + | 204 | WP_241105741.1 | hypothetical protein | - |
| MKK04_RS16605 (MKK04_16605) | 3604579..3604749 | + | 171 | WP_176514331.1 | hypothetical protein | - |
| MKK04_RS16610 (MKK04_16610) | 3605034..3606158 | + | 1125 | WP_241105742.1 | hypothetical protein | - |
| MKK04_RS16615 (MKK04_16615) | 3606169..3606930 | + | 762 | WP_241105743.1 | ERF family protein | - |
| MKK04_RS16620 (MKK04_16620) | 3606914..3607531 | + | 618 | WP_013972383.1 | YqaJ viral recombinase family protein | - |
| MKK04_RS16625 (MKK04_16625) | 3607539..3608045 | + | 507 | WP_241105744.1 | hypothetical protein | - |
| MKK04_RS16630 (MKK04_16630) | 3608048..3608236 | + | 189 | WP_241105745.1 | hypothetical protein | - |
| MKK04_RS16635 (MKK04_16635) | 3608318..3608683 | + | 366 | WP_039615420.1 | hypothetical protein | - |
| MKK04_RS16640 (MKK04_16640) | 3608658..3609221 | + | 564 | WP_241105746.1 | hypothetical protein | - |
| MKK04_RS16645 (MKK04_16645) | 3609715..3610494 | + | 780 | WP_241105747.1 | DUF2786 domain-containing protein | - |
| MKK04_RS16650 (MKK04_16650) | 3610491..3611366 | + | 876 | WP_241105748.1 | hypothetical protein | - |
| MKK04_RS16655 (MKK04_16655) | 3611368..3611832 | - | 465 | WP_241105749.1 | hypothetical protein | - |
| MKK04_RS16660 (MKK04_16660) | 3611875..3612381 | + | 507 | WP_241105750.1 | hypothetical protein | - |
| MKK04_RS16665 (MKK04_16665) | 3612369..3612593 | - | 225 | WP_207833689.1 | hypothetical protein | - |
| MKK04_RS16670 (MKK04_16670) | 3612756..3612983 | - | 228 | WP_241105751.1 | hypothetical protein | - |
| MKK04_RS16675 (MKK04_16675) | 3613106..3613384 | + | 279 | WP_241105752.1 | hypothetical protein | - |
| MKK04_RS16680 (MKK04_16680) | 3613572..3613976 | + | 405 | WP_241105753.1 | DUF2591 family protein | - |
| MKK04_RS16685 (MKK04_16685) | 3613964..3614296 | + | 333 | WP_241105754.1 | hypothetical protein | - |
| MKK04_RS16690 (MKK04_16690) | 3614343..3614654 | + | 312 | WP_241105755.1 | hypothetical protein | - |
| MKK04_RS16695 (MKK04_16695) | 3614706..3615044 | + | 339 | WP_241105756.1 | hypothetical protein | - |
| MKK04_RS16700 (MKK04_16700) | 3615083..3615259 | + | 177 | WP_241105757.1 | hypothetical protein | - |
| MKK04_RS16705 (MKK04_16705) | 3615279..3615683 | + | 405 | WP_225903899.1 | hypothetical protein | - |
| MKK04_RS16710 (MKK04_16710) | 3615569..3616732 | + | 1164 | WP_241106813.1 | hypothetical protein ; Integrase | Integrase |
| MKK04_RS16720 (MKK04_16720) | 3617001..3617357 | - | 357 | WP_003250681.1 | MerR family transcriptional regulator | - |
| MKK04_RS16725 (MKK04_16725) | 3617338..3617640 | - | 303 | WP_003250679.1 | integration host factor subunit alpha | - |
| MKK04_RS16730 (MKK04_16730) | 3617645..3620026 | - | 2382 | WP_241105758.1 | phenylalanine--tRNA ligase subunit beta | - |
| MKK04_RS16735 (MKK04_16735) | 3620058..3621074 | - | 1017 | WP_013972006.1 | phenylalanine--tRNA ligase subunit alpha | - |
| MKK04_RS16740 (MKK04_16740) | 3621184..3621540 | - | 357 | WP_003250671.1 | 50S ribosomal protein L20 | - |
| MKK04_RS16745 (MKK04_16745) | 3621568..3621762 | - | 195 | WP_003250667.1 | 50S ribosomal protein L35 | - |
| MKK04_RS16750 (MKK04_16750) | 3621824..3622375 | - | 552 | WP_013972005.1 | translation initiation factor IF-3 | - |
| MKK04_RS16755 (MKK04_16755) | 3622375..3624297 | - | 1923 | WP_241105759.1 | threonine--tRNA ligase | - |
| MKK04_RS16760 (MKK04_16760) | 3624635..3624940 | + | 306 | WP_207836943.1 | hypothetical protein | - |
| MKK04_RS16765 (MKK04_16765) | 3625103..3625315 | + | 213 | WP_003250656.1 | cold-shock protein | - |
| MKK04_RS16770 (MKK04_16770) | 3625539..3625850 | - | 312 | WP_233686854.1 | I78 family peptidase inhibitor | - |
| MKK04_RS16775 (MKK04_16775) | 3626127..3626339 | + | 213 | WP_233686855.1 | hypothetical protein | - |
| MKK04_RS16780 (MKK04_16780) | 3626311..3627312 | - | 1002 | WP_233686856.1 | nucleoside hydrolase | - |
| MKK04_RS16785 (MKK04_16785) | 3627461..3627859 | - | 399 | WP_016711344.1 | D-ribose pyranase | - |
| MKK04_RS16790 (MKK04_16790) | 3627856..3628764 | - | 909 | WP_241105760.1 | ribokinase | - |
| MKK04_RS16795 (MKK04_16795) | 3628780..3629802 | - | 1023 | WP_207836962.1 | LacI family DNA-binding transcriptional regulator | - |
| MKK04_RS16800 (MKK04_16800) | 3629807..3630802 | - | 996 | WP_241105761.1 | ABC transporter permease | - |
| MKK04_RS16805 (MKK04_16805) | 3630799..3632352 | - | 1554 | WP_241105762.1 | Arabinose import ATP-binding protein AraG | VF |
| MKK04_RS16810 (MKK04_16810) | 3632374..3633330 | - | 957 | WP_207836976.1 | sugar ABC transporter substrate-binding protein | - |
| MKK04_RS16815 (MKK04_16815) | 3633625..3633867 | + | 243 | WP_207836978.1 | DUF1654 domain-containing protein | - |
| MKK04_RS16820 (MKK04_16820) | 3633926..3634351 | - | 426 | WP_241105764.1 | GTP pyrophosphokinase | VF |
| MKK04_RS16825 (MKK04_16825) | 3634502..3635071 | - | 570 | WP_025338525.1 | SPOR domain-containing protein | - |
| MKK04_RS16840 (MKK04_16840) | 3635727..3637010 | + | 1284 | WP_063912435.1 | FAD-binding oxidoreductase | - |
| MKK04_RS16845 (MKK04_16845) | 3637131..3637865 | - | 735 | WP_241105765.1 | peptidase C39 family protein | - |
| MKK04_RS16850 (MKK04_16850) | 3638032..3638208 | + | 177 | WP_207836984.1 | hypothetical protein | - |
| MKK04_RS16855 (MKK04_16855) | 3638341..3639093 | - | 753 | WP_063912437.1 | TerC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|