MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP092702 Location: 3267833..3288764 Organism: Escherichia coli strain S-P-C-029.01 Replicon: chromosome
Accession: NZ_CP092702 Location: 3267833..3288764 Organism: Escherichia coli strain S-P-C-029.01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ592_RS15925 (3263665) | 3263665..3264996 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| MJ592_RS15930 (3265018) | 3265018..3266007 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| MJ592_RS15935 (3266106) | 3266106..3267044 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| MJ592_RS15940 (3267359) | 3267359..3267577 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| MJ592_RS15945 (3267833) | 3267833..3268372 | + | 540 | WP_000675733.1 | protein YhaB | - |
| MJ592_RS15950 (3268394) | 3268394..3269581 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| MJ592_RS15960 (3270604) | 3270604..3271749 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| MJ592_RS15965 (3271846) | 3271846..3272736 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| MJ592_RS15970 (3272766) | 3272766..3273536 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| MJ592_RS15975 (3273552) | 3273552..3274886 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| MJ592_RS15980 (3275261) | 3275261..3276832 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| MJ592_RS15985 (3276981) | 3276981..3277316 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| MJ592_RS15990 (3277316) | 3277316..3277780 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| MJ592_RS15995 (3277835) | 3277835..3278644 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| MJ592_RS16000 (3278893) | 3278893..3280173 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| MJ592_RS16005 (3280196) | 3280196..3280669 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| MJ592_RS16010 (3280680) | 3280680..3281051 | + | 372 | Protein_3144 | PTS sugar transporter subunit IIC | - |
| MJ592_RS16015 (3281047) | 3281047..3281604 | + | 558 | Protein_3145 | amidohydrolase family protein | - |
| MJ592_RS16020 (3281955) | 3281955..3283109 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| MJ592_RS16025 (3283122) | 3283122..3283982 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| MJ592_RS16030 (3284149) | 3284149..3284625 | + | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| MJ592_RS16035 (3284664) | 3284664..3285467 | + | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| MJ592_RS16040 (3285457) | 3285457..3286248 | + | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| MJ592_RS16045 (3286249) | 3286249..3287004 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| MJ592_RS16050 (3287405) | 3287405..3287989 | + | 585 | WP_001045432.1 | fimbrial protein | - |
| MJ592_RS16055 (3288069) | 3288069..3288764 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| MJ592_RS16060 (3288793) | 3288793..3291309 | + | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| MJ592_RS16065 (3291320) | 3291320..3292411 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| MJ592_RS16070 (3292454) | 3292454..3293314 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|