MGE detailed information
MGE type: Genomic_island MGE length: 43374 bp
Accession: NZ_CP092627 Location: 3613555..3656928 Organism: Salmonella enterica subsp. enterica serovar Thompson strain MFDS1011657 Replicon: chromosome
Accession: NZ_CP092627 Location: 3613555..3656928 Organism: Salmonella enterica subsp. enterica serovar Thompson strain MFDS1011657 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ899_RS17780 () | 3609187..3611631 | + | 2445 | WP_017465810.1 | acyl-CoA dehydrogenase FadE | - |
| MJ899_RS17785 () | 3611740..3612507 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| MJ899_RS17790 () | 3612817..3613224 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| MJ899_RS17795 () | 3613555..3614274 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| MJ899_RS17800 () | 3614278..3614493 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| MJ899_RS17805 () | 3614613..3615560 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| MJ899_RS17810 () | 3616054..3616294 | - | 241 | Protein_3486 | PerC family transcriptional regulator | - |
| MJ899_RS17815 () | 3616377..3617198 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| MJ899_RS17820 () | 3617604..3618074 | - | 471 | WP_017465811.1 | AfaD family invasin | - |
| MJ899_RS17825 () | 3618096..3620606 | - | 2511 | WP_017465812.1 | F1 capsule-anchoring protein | VF |
| MJ899_RS17830 () | 3620630..3621370 | - | 741 | WP_017465813.1 | Chaperone protein caf1M | VF |
| MJ899_RS17835 () | 3621445..3621942 | - | 498 | WP_017465814.1 | hypothetical protein | - |
| MJ899_RS17840 () | 3622075..3622569 | - | 495 | WP_017465815.1 | hypothetical protein | - |
| MJ899_RS17845 () | 3623364..3624065 | - | 702 | Protein_3493 | integrase core domain-containing protein | - |
| MJ899_RS17850 () | 3624118..3624291 | + | 174 | WP_001531381.1 | hypothetical protein | - |
| MJ899_RS17855 () | 3624356..3624823 | - | 468 | WP_001284951.1 | Imm42 family immunity protein | - |
| MJ899_RS17860 () | 3624816..3625124 | - | 309 | WP_166427842.1 | hypothetical protein | - |
| MJ899_RS17865 () | 3625115..3625252 | - | 138 | WP_231391191.1 | hypothetical protein | - |
| - | 3625337..3625747 | - | 411 | - | - | Antitoxin Detail |
| MJ899_RS17870 () | 3625494..3625757 | + | 264 | WP_000994215.1 | hypothetical protein | Toxin Detail |
| MJ899_RS17875 () | 3625804..3626238 | - | 435 | WP_000789494.1 | hypothetical protein | - |
| MJ899_RS17880 () | 3626235..3627539 | - | 1305 | Protein_3500 | Putative deoxyribonuclease RhsC | VF |
| MJ899_RS17885 () | 3627676..3628140 | - | 465 | WP_223227916.1 | hypothetical protein | - |
| MJ899_RS17890 () | 3628484..3630997 | - | 2514 | Protein_3502 | RHS repeat-associated core domain-containing protein | - |
| MJ899_RS17895 () | 3630988..3631260 | + | 273 | WP_072100733.1 | SymE family type I addiction module toxin | - |
| MJ899_RS17900 () | 3631191..3631478 | - | 288 | WP_223227914.1 | RHS repeat-associated core domain-containing protein | - |
| MJ899_RS17905 () | 3631630..3632049 | - | 420 | WP_031624782.1 | hypothetical protein | - |
| MJ899_RS17910 () | 3632402..3632944 | - | 543 | Protein_3506 | Protein RhsD | VF |
| MJ899_RS17915 () | 3633008..3633271 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| MJ899_RS17920 () | 3633265..3634419 | - | 1155 | Protein_3508 | Putative deoxyribonuclease RhsC | VF |
| MJ899_RS17925 () | 3634561..3635406 | - | 846 | WP_001084940.1 | hypothetical protein | - |
| MJ899_RS17930 () | 3635416..3639504 | - | 4089 | WP_017465823.1 | RHS repeat-associated core domain-containing protein | - |
| MJ899_RS17935 () | 3639523..3639969 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| MJ899_RS17940 () | 3639993..3642182 | - | 2190 | WP_017465824.1 | Actin cross-linking toxin VgrG1 | VF |
| MJ899_RS17945 () | 3642579..3643100 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| MJ899_RS17950 () | 3643124..3643540 | - | 417 | WP_000759645.1 | DUF2195 family protein | - |
| MJ899_RS17955 () | 3643537..3643631 | - | 95 | Protein_3515 | cytoplasmic protein | - |
| MJ899_RS17960 () | 3643667..3644128 | - | 462 | WP_001684272.1 | hypothetical protein | - |
| MJ899_RS17965 () | 3644113..3644583 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| MJ899_RS17970 () | 3644626..3645393 | - | 768 | WP_017465825.1 | TagF domain-containing protein | - |
| MJ899_RS17975 () | 3645393..3649262 | - | 3870 | WP_017465826.1 | hypothetical protein | VF |
| MJ899_RS17980 () | 3649296..3649727 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| MJ899_RS17985 () | 3649930..3650703 | - | 774 | WP_017465828.1 | Rap1a/Tai family immunity protein | - |
| MJ899_RS17990 () | 3650708..3652012 | - | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| MJ899_RS17995 () | 3652009..3653352 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| MJ899_RS18000 () | 3653356..3653892 | - | 537 | WP_001007105.1 | hypothetical protein | VF |
| MJ899_RS18005 () | 3653959..3654444 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| MJ899_RS18010 () | 3654587..3654970 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| MJ899_RS18015 () | 3654955..3655440 | - | 486 | WP_017465829.1 | type VI secretion system amidase effector protein Tae4 | - |
| MJ899_RS18020 () | 3655483..3655675 | - | 193 | Protein_3528 | type VI secretion system lipoprotein TssJ | - |
| MJ899_RS18025 () | 3655743..3656228 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| MJ899_RS18030 () | 3656482..3656814 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| MJ899_RS18035 () | 3656941..3657051 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| MJ899_RS18040 () | 3657114..3658622 | - | 1509 | WP_017465830.1 | type VI secretion system contractile sheath large subunit | - |
| MJ899_RS18045 () | 3658646..3659188 | - | 543 | WP_000996817.1 | type VI secretion system contractile sheath small subunit | - |
| MJ899_RS18050 () | 3659288..3661927 | - | 2640 | WP_017465831.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|