MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP092533 Location: 4137571..4156823 Organism: Escherichia coli strain DS566-1 Replicon: chromosome
Accession: NZ_CP092533 Location: 4137571..4156823 Organism: Escherichia coli strain DS566-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKD47_RS20100 (4133050) | 4133050..4133553 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| MKD47_RS20105 (4133566) | 4133566..4134096 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| MKD47_RS20110 (4134106) | 4134106..4136742 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| MKD47_RS20115 (4136809) | 4136809..4137534 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| MKD47_RS20120 (4137571) | 4137571..4138110 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| MKD47_RS20125 (4138175) | 4138175..4138723 | - | 549 | WP_001774144.1 | hypothetical protein | VF |
| MKD47_RS20130 (4139205) | 4139205..4139801 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| MKD47_RS20135 (4140279) | 4140279..4140881 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| MKD47_RS20140 (4142337) | 4142337..4143053 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| MKD47_RS20145 (4143073) | 4143073..4144179 | + | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| MKD47_RS20150 (4144244) | 4144244..4145224 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| MKD47_RS20155 (4145334) | 4145334..4145539 | + | 206 | Protein_3944 | HNH endonuclease | - |
| MKD47_RS20160 (4145807) | 4145807..4147047 | - | 1241 | Protein_3945 | helicase YjhR | - |
| MKD47_RS20165 (4147163) | 4147163..4147294 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| MKD47_RS20170 (4147785) | 4147785..4148042 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| MKD47_RS20175 (4148054) | 4148054..4148599 | + | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| MKD47_RS20180 (4148655) | 4148655..4149401 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| MKD47_RS20185 (4149570) | 4149570..4149788 | + | 219 | Protein_3950 | hypothetical protein | - |
| MKD47_RS20190 (4149826) | 4149826..4149942 | + | 117 | Protein_3951 | VOC family protein | - |
| MKD47_RS20195 (4150187) | 4150187..4151308 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| MKD47_RS20200 (4151305) | 4151305..4151583 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| MKD47_RS20205 (4151595) | 4151595..4152908 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| MKD47_RS20210 (4152921) | 4152921..4153727 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| MKD47_RS20215 (4153858) | 4153858..4154289 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| MKD47_RS20220 (4154301) | 4154301..4154933 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| MKD47_RS20225 (4154950) | 4154950..4155732 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| MKD47_RS20230 (4156035) | 4156035..4156823 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| MKD47_RS20235 (4156828) | 4156828..4157733 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| MKD47_RS20240 (4157744) | 4157744..4159711 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| MKD47_RS20245 (4159818) | 4159818..4161167 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|