MGE detailed information
MGE type: Genomic_island MGE length: 43374 bp
Accession: NZ_CP092510 Location: 3613452..3656825 Organism: Salmonella enterica subsp. enterica serovar Thompson Replicon: chromosome
Accession: NZ_CP092510 Location: 3613452..3656825 Organism: Salmonella enterica subsp. enterica serovar Thompson Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKE90_RS17775 () | 3609084..3611528 | + | 2445 | WP_017465810.1 | acyl-CoA dehydrogenase FadE | - |
| MKE90_RS17780 () | 3611637..3612404 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| MKE90_RS17785 () | 3612714..3613121 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| MKE90_RS17790 () | 3613452..3614171 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| MKE90_RS17795 () | 3614175..3614390 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| MKE90_RS17800 () | 3614510..3615457 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| MKE90_RS17805 () | 3615951..3616191 | - | 241 | Protein_3486 | PerC family transcriptional regulator | - |
| MKE90_RS17810 () | 3616274..3617095 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| MKE90_RS17815 () | 3617501..3617971 | - | 471 | WP_017465811.1 | AfaD family invasin | - |
| MKE90_RS17820 () | 3617993..3620503 | - | 2511 | WP_017465812.1 | F1 capsule-anchoring protein | VF |
| MKE90_RS17825 () | 3620527..3621267 | - | 741 | WP_017465813.1 | Chaperone protein caf1M | VF |
| MKE90_RS17830 () | 3621342..3621839 | - | 498 | WP_017465814.1 | hypothetical protein | - |
| MKE90_RS17835 () | 3621972..3622466 | - | 495 | WP_017465815.1 | hypothetical protein | - |
| MKE90_RS17840 () | 3623261..3623962 | - | 702 | Protein_3493 | integrase core domain-containing protein | - |
| MKE90_RS17845 () | 3624015..3624188 | + | 174 | WP_001531381.1 | hypothetical protein | - |
| MKE90_RS17850 () | 3624253..3624720 | - | 468 | WP_001284951.1 | Imm42 family immunity protein | - |
| MKE90_RS17855 () | 3624713..3625021 | - | 309 | WP_166427842.1 | hypothetical protein | - |
| MKE90_RS17860 () | 3625012..3625149 | - | 138 | WP_231391191.1 | hypothetical protein | - |
| - | 3625234..3625644 | - | 411 | - | - | Antitoxin Detail |
| MKE90_RS17865 () | 3625391..3625654 | + | 264 | WP_000994215.1 | hypothetical protein | Toxin Detail |
| MKE90_RS17870 () | 3625701..3626135 | - | 435 | WP_000789494.1 | hypothetical protein | - |
| MKE90_RS17875 () | 3626132..3627436 | - | 1305 | Protein_3500 | Putative deoxyribonuclease RhsC | VF |
| MKE90_RS17880 () | 3627573..3628037 | - | 465 | WP_223227916.1 | hypothetical protein | - |
| MKE90_RS17885 () | 3628381..3630894 | - | 2514 | Protein_3502 | RHS repeat-associated core domain-containing protein | - |
| MKE90_RS17890 () | 3630885..3631157 | + | 273 | WP_072100733.1 | SymE family type I addiction module toxin | - |
| MKE90_RS17895 () | 3631088..3631375 | - | 288 | WP_223227914.1 | RHS repeat-associated core domain-containing protein | - |
| MKE90_RS17900 () | 3631527..3631946 | - | 420 | WP_031624782.1 | hypothetical protein | - |
| MKE90_RS17905 () | 3632299..3632841 | - | 543 | Protein_3506 | Protein RhsD | VF |
| MKE90_RS17910 () | 3632905..3633168 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| MKE90_RS17915 () | 3633162..3634316 | - | 1155 | Protein_3508 | Putative deoxyribonuclease RhsC | VF |
| MKE90_RS17920 () | 3634458..3635303 | - | 846 | WP_001084940.1 | hypothetical protein | - |
| MKE90_RS17925 () | 3635313..3639401 | - | 4089 | WP_017465823.1 | RHS repeat-associated core domain-containing protein | - |
| MKE90_RS17930 () | 3639420..3639866 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| MKE90_RS17935 () | 3639890..3642079 | - | 2190 | WP_017465824.1 | Actin cross-linking toxin VgrG1 | VF |
| MKE90_RS17940 () | 3642476..3642997 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| MKE90_RS17945 () | 3643021..3643437 | - | 417 | WP_000759645.1 | DUF2195 family protein | - |
| MKE90_RS17950 () | 3643434..3643528 | - | 95 | Protein_3515 | cytoplasmic protein | - |
| MKE90_RS17955 () | 3643564..3644025 | - | 462 | WP_001684272.1 | hypothetical protein | - |
| MKE90_RS17960 () | 3644010..3644480 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| MKE90_RS17965 () | 3644523..3645290 | - | 768 | WP_017465825.1 | TagF domain-containing protein | - |
| MKE90_RS17970 () | 3645290..3649159 | - | 3870 | WP_017465826.1 | hypothetical protein | VF |
| MKE90_RS17975 () | 3649193..3649624 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| MKE90_RS17980 () | 3649827..3650600 | - | 774 | WP_017465828.1 | Rap1a/Tai family immunity protein | - |
| MKE90_RS17985 () | 3650605..3651909 | - | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| MKE90_RS17990 () | 3651906..3653249 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| MKE90_RS17995 () | 3653253..3653789 | - | 537 | WP_001007105.1 | hypothetical protein | VF |
| MKE90_RS18000 () | 3653856..3654341 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| MKE90_RS18005 () | 3654484..3654867 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| MKE90_RS18010 () | 3654852..3655337 | - | 486 | WP_017465829.1 | type VI secretion system amidase effector protein Tae4 | - |
| MKE90_RS18015 () | 3655380..3655572 | - | 193 | Protein_3528 | type VI secretion system lipoprotein TssJ | - |
| MKE90_RS18020 () | 3655640..3656125 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| MKE90_RS18025 () | 3656379..3656711 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| MKE90_RS18030 () | 3656838..3656948 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| MKE90_RS18035 () | 3657011..3658519 | - | 1509 | WP_017465830.1 | type VI secretion system contractile sheath large subunit | - |
| MKE90_RS18040 () | 3658543..3659085 | - | 543 | WP_000996817.1 | type VI secretion system contractile sheath small subunit | - |
| MKE90_RS18045 () | 3659185..3661824 | - | 2640 | WP_017465831.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|