MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 45886 bp
Accession: NZ_CP092494 Location: 1..45886 Organism: Citrobacter freundii strain SCLZS47 Replicon: plasmid pKPC2_SCLZS47
Accession: NZ_CP092494 Location: 1..45886 Organism: Citrobacter freundii strain SCLZS47 Replicon: plasmid pKPC2_SCLZS47
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ253_RS25340 (MJ253_25340) | 1..981 | + | 981 | WP_024130064.1 | replication initiator protein A | - |
| MJ253_RS25345 (MJ253_25345) | 978..1412 | + | 435 | WP_020956912.1 | hypothetical protein | - |
| MJ253_RS25350 (MJ253_25350) | 1514..1873 | + | 360 | WP_020956913.1 | DNA distortion polypeptide 3 | - |
| MJ253_RS25355 (MJ253_25355) | 1886..2404 | + | 519 | WP_020956914.1 | DUF2726 domain-containing protein | - |
| MJ253_RS25360 (MJ253_25360) | 2409..2582 | - | 174 | WP_020956915.1 | hypothetical protein | - |
| MJ253_RS25365 (MJ253_25365) | 2719..5724 | - | 3006 | WP_013213984.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| MJ253_RS25370 (MJ253_25370) | 5887..6444 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| MJ253_RS25375 (MJ253_25375) | 6567..7547 | + | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| MJ253_RS25380 (MJ253_25380) | 7823..8704 | + | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| MJ253_RS25385 (MJ253_25385) | 8954..9835 | - | 882 | Protein_9 | IS1182 family transposase ISKpn6 | Transposase |
| MJ253_RS25390 (MJ253_25390) | 9939..10235 | - | 297 | WP_013213987.1 | transcriptional regulator | - |
| MJ253_RS25395 (MJ253_25395) | 10281..10436 | - | 156 | WP_013213988.1 | hypothetical protein | - |
| MJ253_RS25400 (MJ253_25400) | 10564..10989 | - | 426 | WP_013213989.1 | antirestriction protein | - |
| MJ253_RS25405 (MJ253_25405) | 11100..11378 | - | 279 | WP_013213990.1 | hypothetical protein | - |
| MJ253_RS25410 (MJ253_25410) | 11707..12840 | - | 1134 | WP_016152115.1 | porin | - |
| MJ253_RS25415 (MJ253_25415) | 13095..14357 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| MJ253_RS25420 (MJ253_25420) | 14955..15572 | - | 618 | Protein_16 | replication protein | - |
| MJ253_RS25425 (MJ253_25425) | 15964..16524 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| MJ253_RS25430 (MJ253_25430) | 16528..19494 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| MJ253_RS25435 (MJ253_25435) | 19611..19895 | - | 285 | WP_041937885.1 | hypothetical protein | - |
| MJ253_RS25440 (MJ253_25440) | 19976..20620 | - | 645 | WP_020956884.1 | AAA family ATPase | - |
| MJ253_RS25445 (MJ253_25445) | 20877..21347 | - | 471 | WP_020956885.1 | H-NS family nucleoid-associated regulatory protein | - |
| MJ253_RS25450 (MJ253_25450) | 21406..21612 | - | 207 | WP_041937892.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| MJ253_RS25455 (MJ253_25455) | 21619..24018 | - | 2400 | WP_222826765.1 | type IA DNA topoisomerase | - |
| MJ253_RS25460 (MJ253_25460) | 24024..24770 | - | 747 | WP_020956888.1 | hypothetical protein | - |
| MJ253_RS25465 (MJ253_25465) | 24914..25261 | - | 348 | WP_020956889.1 | hypothetical protein | - |
| MJ253_RS25470 (MJ253_25470) | 25266..25658 | - | 393 | WP_020956890.1 | cag pathogenicity island Cag12 family protein | - |
| MJ253_RS25475 (MJ253_25475) | 25661..26047 | - | 387 | WP_020956891.1 | hypothetical protein | - |
| MJ253_RS25480 (MJ253_25480) | 26057..28024 | - | 1968 | WP_020956892.1 | Protein VirD4 | VF |
| MJ253_RS25485 (MJ253_25485) | 28026..29063 | - | 1038 | WP_041937896.1 | Type IV secretion system protein VirB11 | VF |
| MJ253_RS25490 (MJ253_25490) | 29089..30600 | - | 1512 | WP_020956894.1 | Type IV secretion system protein virB10 | VF |
| MJ253_RS25495 (MJ253_25495) | 30597..31517 | - | 921 | WP_020956895.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| MJ253_RS25500 (MJ253_25500) | 31522..32262 | - | 741 | WP_020956896.1 | VirB8/TrbF family protein | - |
| MJ253_RS25505 (MJ253_25505) | 32249..32386 | - | 138 | WP_088903450.1 | conjugal transfer protein | - |
| MJ253_RS25510 (MJ253_25510) | 32389..33417 | - | 1029 | WP_232481337.1 | type IV secretion system protein | - |
| MJ253_RS25515 (MJ253_25515) | 33479..33736 | - | 258 | WP_051245713.1 | EexN family lipoprotein | - |
| MJ253_RS25520 (MJ253_25520) | 33744..34490 | - | 747 | WP_030003463.1 | type IV secretion system protein | - |
| MJ253_RS25525 (MJ253_25525) | 34502..37261 | - | 2760 | WP_020956898.1 | Type IV secretion system protein virB4 | VF |
| MJ253_RS25530 (MJ253_25530) | 37280..37567 | - | 288 | WP_020956899.1 | TrbC/VirB2 family protein | - |
| MJ253_RS25535 (MJ253_25535) | 37554..38192 | - | 639 | WP_020956900.1 | Type IV secretion system protein virB1 | VF |
| MJ253_RS25540 (MJ253_25540) | 38406..38738 | + | 333 | WP_227551116.1 | helix-turn-helix transcriptional regulator | - |
| MJ253_RS25545 (MJ253_25545) | 38768..39958 | - | 1191 | WP_041937886.1 | hypothetical protein | Relaxase |
| MJ253_RS25550 (MJ253_25550) | 39960..40514 | - | 555 | WP_020956901.1 | DNA distortion polypeptide 1 | - |
| MJ253_RS25555 (MJ253_25555) | 40956..41222 | - | 267 | WP_020956902.1 | hypothetical protein | - |
| MJ253_RS25560 (MJ253_25560) | 41244..41519 | - | 276 | WP_020956903.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| MJ253_RS25565 (MJ253_25565) | 41531..41755 | - | 225 | WP_020956904.1 | DUF6290 family protein | Antitoxin Detail |
| MJ253_RS25570 (MJ253_25570) | 42067..42318 | - | 252 | WP_240210407.1 | hypothetical protein | - |
| MJ253_RS25575 (MJ253_25575) | 42429..42575 | - | 147 | WP_240210408.1 | hypothetical protein | - |
| MJ253_RS25580 (MJ253_25580) | 43004..43237 | - | 234 | WP_240210409.1 | hypothetical protein | - |
| MJ253_RS25585 (MJ253_25585) | 43242..43463 | - | 222 | WP_020956907.1 | helix-turn-helix domain-containing protein | - |
| MJ253_RS25590 (MJ253_25590) | 43460..43705 | - | 246 | WP_020956908.1 | hypothetical protein | - |
| MJ253_RS25595 (MJ253_25595) | 43702..44244 | - | 543 | WP_020956909.1 | hypothetical protein | - |
| MJ253_RS25600 (MJ253_25600) | 44335..44859 | - | 525 | WP_020956910.1 | DnaJ domain-containing protein | - |
| MJ253_RS25605 (MJ253_25605) | 44967..45326 | + | 360 | WP_020956911.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|