MGE detailed information
MGE type: Prophage MGE length: 68108 bp
Accession: NZ_CP092466 Location: 2181324..2249431 Organism: Citrobacter portucalensis strain Cf7303 Replicon: chromosome
Accession: NZ_CP092466 Location: 2181324..2249431 Organism: Citrobacter portucalensis strain Cf7303 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LY264_RS10550 (LY264_10550) | 2177722..2178363 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LY264_RS10555 (LY264_10555) | 2178431..2179609 | - | 1179 | WP_048224187.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LY264_RS10560 (LY264_10560) | 2179742..2180032 | + | 291 | WP_048224185.1 | DNA damage-inducible protein YebG | - |
| LY264_RS10565 (LY264_10565) | 2180154..2180507 | + | 354 | WP_020996626.1 | protein YebF | - |
| LY264_RS10570 (LY264_10570) | 2180602..2181261 | + | 660 | WP_048224183.1 | tellurite resistance TerB family protein | - |
| LY264_RS10575 (LY264_10575) | 2181348..2183402 | + | 2055 | WP_171845941.1 | oligopeptidase B | - |
| LY264_RS10580 (LY264_10580) | 2183393..2184055 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| LY264_RS10585 (LY264_10585) | 2184079..2184735 | - | 657 | WP_008785043.1 | carbon-nitrogen hydrolase family protein | - |
| LY264_RS10590 (LY264_10590) | 2184842..2185072 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| LY264_RS10595 (LY264_10595) | 2185216..2185590 | + | 375 | WP_003833799.1 | CopC domain-containing protein YobA | - |
| LY264_RS10600 (LY264_10600) | 2185594..2186466 | + | 873 | WP_008785042.1 | copper homeostasis membrane protein CopD | - |
| LY264_RS10605 (LY264_10605) | 2186487..2186825 | + | 339 | WP_032943770.1 | YebY family protein | - |
| - | 2186946..2187086 | - | 141 | - | - | Antitoxin Detail |
| - | 2186981..2187084 | + | 104 | - | - | Toxin Detail |
| LY264_RS10610 (LY264_10610) | 2187162..2188247 | - | 1086 | WP_071692209.1 | hypothetical protein ; Integrase | Integrase |
| LY264_RS10615 (LY264_10615) | 2188216..2188488 | - | 273 | WP_071692210.1 | excisionase | - |
| LY264_RS10620 (LY264_10620) | 2188553..2188795 | - | 243 | WP_065944795.1 | DUF4060 family protein | - |
| LY264_RS10625 (LY264_10625) | 2188782..2188985 | - | 204 | WP_003841645.1 | hypothetical protein | - |
| LY264_RS10630 (LY264_10630) | 2188978..2189322 | - | 345 | WP_171845942.1 | hypothetical protein | - |
| LY264_RS10635 (LY264_10635) | 2189357..2190448 | - | 1092 | WP_071692475.1 | RecT family recombinase | - |
| LY264_RS10640 (LY264_10640) | 2190461..2193289 | - | 2829 | WP_071692474.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LY264_RS10645 (LY264_10645) | 2193429..2193590 | - | 162 | WP_071692473.1 | YdaE family protein | - |
| LY264_RS10650 (LY264_10650) | 2193602..2193808 | - | 207 | WP_001568763.1 | hypothetical protein | - |
| LY264_RS10655 (LY264_10655) | 2194417..2194806 | - | 390 | WP_240498925.1 | hypothetical protein | - |
| LY264_RS10660 (LY264_10660) | 2194811..2195221 | - | 411 | WP_071692472.1 | hypothetical protein | - |
| LY264_RS10665 (LY264_10665) | 2195255..2195650 | - | 396 | WP_071692471.1 | helix-turn-helix domain-containing protein | - |
| LY264_RS10670 (LY264_10670) | 2195754..2195987 | + | 234 | WP_071692470.1 | YdaS family helix-turn-helix protein | - |
| LY264_RS10675 (LY264_10675) | 2195990..2196529 | + | 540 | WP_071692469.1 | toxin YdaT domain-containing protein | - |
| LY264_RS10680 (LY264_10680) | 2196614..2197189 | + | 576 | Protein_2092 | replication protein | - |
| LY264_RS10685 (LY264_10685) | 2197580..2197888 | + | 309 | Protein_2093 | hypothetical protein | - |
| LY264_RS10690 (LY264_10690) | 2197891..2198229 | + | 339 | WP_071692467.1 | DUF977 family protein | - |
| LY264_RS10695 (LY264_10695) | 2198226..2198561 | + | 336 | WP_071692466.1 | hypothetical protein | - |
| LY264_RS10700 (LY264_10700) | 2198770..2199585 | + | 816 | WP_249457661.1 | hypothetical protein | - |
| LY264_RS10705 (LY264_10705) | 2199614..2200015 | + | 402 | WP_071692464.1 | hypothetical protein | - |
| LY264_RS10710 (LY264_10710) | 2200008..2200268 | + | 261 | WP_071692463.1 | DNA polymerase III subunit theta | - |
| LY264_RS10715 (LY264_10715) | 2200270..2200518 | + | 249 | WP_196239009.1 | hypothetical protein | - |
| LY264_RS10720 (LY264_10720) | 2201043..2201288 | + | 246 | Protein_2100 | DNA cytosine methyltransferase | - |
| LY264_RS10725 (LY264_10725) | 2201406..2201681 | + | 276 | WP_071692460.1 | hypothetical protein | - |
| LY264_RS10730 (LY264_10730) | 2201723..2201911 | + | 189 | Protein_2102 | DNA polymerase III subunit theta | - |
| LY264_RS10735 (LY264_10735) | 2202319..2202552 | + | 234 | WP_032944444.1 | DinI family protein | - |
| LY264_RS10740 (LY264_10740) | 2202663..2202911 | + | 249 | WP_071524344.1 | hypothetical protein | - |
| LY264_RS10745 (LY264_10745) | 2202946..2203545 | + | 600 | WP_071692458.1 | DUF1367 family protein | - |
| LY264_RS10750 (LY264_10750) | 2203545..2203751 | + | 207 | WP_071692457.1 | hypothetical protein | - |
| LY264_RS10755 (LY264_10755) | 2203754..2204362 | + | 609 | WP_071692456.1 | recombination protein NinG | - |
| LY264_RS10760 (LY264_10760) | 2204359..2204499 | + | 141 | WP_001568781.1 | YlcG family protein | - |
| LY264_RS10765 (LY264_10765) | 2204496..2205326 | + | 831 | WP_057064561.1 | antitermination protein | - |
| LY264_RS10770 (LY264_10770) | 2205748..2206026 | + | 279 | WP_001568784.1 | phage holin | - |
| LY264_RS10775 (LY264_10775) | 2205998..2206546 | + | 549 | WP_071692445.1 | lysozyme | - |
| LY264_RS10780 (LY264_10780) | 2206543..2207061 | + | 519 | WP_071692444.1 | DUF2514 domain-containing protein | - |
| LY264_RS10785 (LY264_10785) | 2207148..2207603 | + | 456 | WP_021571192.1 | hypothetical protein | - |
| LY264_RS10790 (LY264_10790) | 2207880..2208869 | + | 990 | WP_071692443.1 | terminase small subunit | - |
| LY264_RS10795 (LY264_10795) | 2208847..2210151 | + | 1305 | WP_071692442.1 | terminase family protein | - |
| LY264_RS10800 (LY264_10800) | 2210156..2211556 | + | 1401 | WP_071692441.1 | DUF4055 domain-containing protein | - |
| LY264_RS10805 (LY264_10805) | 2211558..2212664 | + | 1107 | WP_071692440.1 | phage minor head protein | - |
| LY264_RS10810 (LY264_10810) | 2212667..2212810 | + | 144 | WP_165612491.1 | hypothetical protein | - |
| LY264_RS10815 (LY264_10815) | 2212937..2213689 | + | 753 | WP_071692439.1 | hypothetical protein | - |
| LY264_RS10820 (LY264_10820) | 2213706..2214842 | + | 1137 | WP_071692438.1 | P22 phage major capsid protein family protein | - |
| LY264_RS10825 (LY264_10825) | 2214882..2215259 | + | 378 | WP_249457663.1 | hypothetical protein | - |
| LY264_RS10830 (LY264_10830) | 2215262..2215744 | + | 483 | WP_071692436.1 | hypothetical protein | - |
| LY264_RS10835 (LY264_10835) | 2215746..2216099 | + | 354 | WP_071692435.1 | hypothetical protein | - |
| LY264_RS10840 (LY264_10840) | 2216102..2216701 | + | 600 | WP_071692434.1 | hypothetical protein | - |
| LY264_RS10845 (LY264_10845) | 2216709..2217140 | + | 432 | WP_240498923.1 | DUF4128 domain-containing protein | - |
| LY264_RS10850 (LY264_10850) | 2217187..2218119 | + | 933 | WP_071692432.1 | phage tail tube protein | - |
| LY264_RS10855 (LY264_10855) | 2218161..2218499 | + | 339 | WP_071692431.1 | phage tail assembly chaperone | - |
| LY264_RS10860 (LY264_10860) | 2218607..2218804 | + | 198 | WP_240498922.1 | DUF1799 domain-containing protein | - |
| LY264_RS10865 (LY264_10865) | 2218804..2221857 | + | 3054 | WP_249457665.1 | phage tail tape measure protein | - |
| LY264_RS10870 (LY264_10870) | 2222075..2222404 | + | 330 | WP_032943631.1 | hypothetical protein | - |
| LY264_RS10875 (LY264_10875) | 2222464..2222814 | + | 351 | WP_071692428.1 | phage tail protein | - |
| LY264_RS10880 (LY264_10880) | 2222823..2223596 | + | 774 | WP_071692427.1 | phage minor tail protein L | - |
| LY264_RS10885 (LY264_10885) | 2223609..2224340 | + | 732 | WP_071692426.1 | C40 family peptidase | - |
| LY264_RS10890 (LY264_10890) | 2224328..2224921 | + | 594 | WP_071692425.1 | tail assembly protein | - |
| LY264_RS10895 (LY264_10895) | 2224961..2225365 | + | 405 | WP_131820869.1 | hypothetical protein | - |
| LY264_RS10900 (LY264_10900) | 2225418..2228645 | + | 3228 | WP_249457667.1 | DUF1983 domain-containing protein | - |
| LY264_RS10905 (LY264_10905) | 2228647..2229591 | + | 945 | WP_071692422.1 | DUF6453 family protein | - |
| LY264_RS10910 (LY264_10910) | 2229601..2231013 | + | 1413 | WP_071692421.1 | phage tail protein | - |
| LY264_RS10915 (LY264_10915) | 2231148..2231323 | - | 176 | Protein_2139 | DinI-like family protein | - |
| LY264_RS10920 (LY264_10920) | 2231561..2233120 | + | 1560 | WP_071692420.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| LY264_RS10925 (LY264_10925) | 2233233..2233328 | - | 96 | Protein_2141 | SOS response-associated peptidase | - |
| LY264_RS10930 (LY264_10930) | 2233812..2234453 | + | 642 | WP_048224177.1 | protein-serine/threonine phosphatase | - |
| LY264_RS10935 (LY264_10935) | 2234454..2234645 | - | 192 | WP_003034941.1 | YebW family protein | - |
| LY264_RS10940 (LY264_10940) | 2234748..2234984 | - | 237 | WP_165612495.1 | YebV family protein | - |
| LY264_RS10945 (LY264_10945) | 2235085..2236472 | - | 1388 | Protein_2145 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LY264_RS10950 (LY264_10950) | 2236585..2239218 | - | 2634 | WP_048216184.1 | hypothetical protein | VF |
| LY264_RS10955 (LY264_10955) | 2239187..2240470 | - | 1284 | WP_048224174.1 | membrane integrity lipid transport subunit YebS | - |
| LY264_RS10960 (LY264_10960) | 2240599..2241096 | + | 498 | WP_003833782.1 | GAF domain-containing protein | - |
| LY264_RS10965 (LY264_10965) | 2241193..2241879 | + | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| LY264_RS10970 (LY264_10970) | 2241899..2243947 | + | 2049 | WP_048224172.1 | carboxy terminal-processing peptidase | - |
| LY264_RS10975 (LY264_10975) | 2244140..2245021 | + | 882 | WP_003034964.1 | protease HtpX | - |
| LY264_RS10980 (LY264_10980) | 2245069..2246442 | - | 1374 | WP_048216186.1 | MFS transporter | - |
| LY264_RS10985 (LY264_10985) | 2246617..2247408 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| LY264_RS10990 (LY264_10990) | 2247523..2247762 | - | 240 | WP_003034975.1 | YobH family protein | - |
| LY264_RS10995 (LY264_10995) | 2247927..2248070 | + | 144 | WP_048216187.1 | PhoP/PhoQ regulator MgrB | - |
| LY264_RS11000 (LY264_11000) | 2248145..2248429 | + | 285 | WP_048216188.1 | YebO family protein | - |
| LY264_RS11005 (LY264_11005) | 2249066..2249209 | + | 144 | WP_003034983.1 | DUF2627 domain-containing protein | - |
| LY264_RS11010 (LY264_11010) | 2249222..2249431 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LY264_RS11015 (LY264_11015) | 2249651..2251396 | + | 1746 | WP_003833773.1 | peptidoglycan glycosyltransferase FtsI | - |
| LY264_RS11020 (LY264_11020) | 2251460..2252269 | + | 810 | WP_048216189.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LY264_RS11025 (LY264_11025) | 2252266..2252832 | - | 567 | WP_003021013.1 | manganese efflux pump MntP | - |
| LY264_RS11030 (LY264_11030) | 2253265..2253723 | - | 459 | WP_003021010.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|