MGE detailed information
MGE type: Prophage MGE length: 24343 bp
Accession: NZ_CP092460 Location: 732613..756955 Organism: Dickeya fangzhongdai strain AP6 Replicon: chromosome
Accession: NZ_CP092460 Location: 732613..756955 Organism: Dickeya fangzhongdai strain AP6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FXN80_RS03375 (FXN80_03375) | 730017..730619 | - | 603 | WP_032634494.1 | DUF1788 domain-containing protein | - |
| FXN80_RS03380 (FXN80_03380) | 730616..731233 | - | 618 | WP_100126891.1 | DUF1819 family protein | - |
| FXN80_RS03385 (FXN80_03385) | 731658..732521 | + | 864 | WP_006812015.1 | GTPase family protein | - |
| FXN80_RS03390 (FXN80_03390) | 732613..733434 | + | 822 | WP_000197389.1 | DUF932 domain-containing protein | - |
| FXN80_RS03395 (FXN80_03395) | 733651..734352 | + | 702 | WP_006812588.1 | WYL domain-containing protein | - |
| FXN80_RS03400 (FXN80_03400) | 734393..734629 | + | 237 | WP_001144031.1 | protein YpjK | - |
| FXN80_RS03405 (FXN80_03405) | 734629..735072 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| FXN80_RS03410 (FXN80_03410) | 735095..735562 | + | 468 | WP_063841896.1 | protein YkfB | - |
| FXN80_RS03415 (FXN80_03415) | 735639..735878 | + | 240 | WP_112020496.1 | DUF905 domain-containing protein | - |
| FXN80_RS03420 (FXN80_03420) | 735981..736439 | + | 459 | WP_112020495.1 | antirestriction protein | - |
| FXN80_RS03425 (FXN80_03425) | 736455..736931 | + | 477 | WP_047355118.1 | RadC family protein | - |
| FXN80_RS03430 (FXN80_03430) | 736940..737161 | + | 222 | WP_000691995.1 | DUF987 domain-containing protein | - |
| FXN80_RS03435 (FXN80_03435) | 737181..737498 | + | 318 | WP_006812013.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FXN80_RS03440 (FXN80_03440) | 737519..737860 | + | 342 | WP_006812012.1 | TA system toxin CbtA family protein | Toxin Detail |
| FXN80_RS03450 (FXN80_03450) | 738361..740196 | - | 1836 | WP_049854589.1 | RNA polymerase sigma factor RpoD | - |
| FXN80_RS03455 (FXN80_03455) | 740353..742107 | - | 1755 | WP_161130373.1 | DNA primase | - |
| FXN80_RS03460 (FXN80_03460) | 742235..742450 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| FXN80_RS03465 (FXN80_03465) | 742697..743710 | + | 1014 | WP_038917799.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| FXN80_RS03470 (FXN80_03470) | 743756..744226 | - | 471 | WP_013316302.1 | transcriptional regulator ArgR | - |
| FXN80_RS03475 (FXN80_03475) | 744717..745658 | + | 942 | WP_038662455.1 | malate dehydrogenase | - |
| FXN80_RS03480 (FXN80_03480) | 745729..746010 | - | 282 | WP_022632112.1 | helix-turn-helix transcriptional regulator | - |
| FXN80_RS03485 (FXN80_03485) | 746199..746585 | + | 387 | WP_038917801.1 | DNA-binding protein | - |
| FXN80_RS03490 (FXN80_03490) | 746812..747186 | + | 375 | WP_038920789.1 | DNA-binding protein | - |
| FXN80_RS03495 (FXN80_03495) | 747188..748159 | - | 972 | WP_100848913.1 | octaprenyl diphosphate synthase | - |
| FXN80_RS03500 (FXN80_03500) | 748420..748731 | + | 312 | WP_016943772.1 | 50S ribosomal protein L21 | - |
| FXN80_RS03505 (FXN80_03505) | 748751..749008 | + | 258 | WP_022632116.1 | 50S ribosomal protein L27 | - |
| FXN80_RS03510 (FXN80_03510) | 749130..750074 | + | 945 | WP_049854587.1 | DMT family transporter | - |
| FXN80_RS03515 (FXN80_03515) | 750341..751516 | + | 1176 | WP_100848914.1 | Obg family GTPase CgtA | - |
| FXN80_RS03520 (FXN80_03520) | 751622..753055 | - | 1434 | WP_038917804.1 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| FXN80_RS03525 (FXN80_03525) | 753272..753748 | + | 477 | WP_019843796.1 | transcription elongation factor GreA | - |
| FXN80_RS03530 (FXN80_03530) | 753874..754167 | - | 294 | WP_013316313.1 | ribosome assembly RNA-binding protein YhbY | - |
| FXN80_RS03535 (FXN80_03535) | 754326..754955 | + | 630 | WP_038662433.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
| FXN80_RS03540 (FXN80_03540) | 755003..756955 | + | 1953 | WP_071605151.1 | ATP-dependent zinc metalloprotease FtsH | - |
| FXN80_RS03545 (FXN80_03545) | 757062..757895 | + | 834 | WP_161130372.1 | dihydropteroate synthase | - |
| FXN80_RS03550 (FXN80_03550) | 757904..759241 | + | 1338 | WP_100848916.1 | phosphoglucosamine mutase | - |
| FXN80_RS03555 (FXN80_03555) | 759541..759876 | + | 336 | WP_039692127.1 | preprotein translocase subunit SecG | - |
| FXN80_RS03570 (FXN80_03570) | 760373..760825 | + | 453 | WP_013316320.1 | ribosome maturation factor RimP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|