MGE detailed information
MGE type: Prophage MGE length: 57443 bp
Accession: NZ_CP092460 Location: 2421679..2479121 Organism: Dickeya fangzhongdai strain AP6 Replicon: chromosome
Accession: NZ_CP092460 Location: 2421679..2479121 Organism: Dickeya fangzhongdai strain AP6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FXN80_RS10695 (FXN80_10695) | 2417978..2419351 | - | 1374 | WP_161130415.1 | pectate lyase | - |
| FXN80_RS10700 (FXN80_10700) | 2420111..2420845 | - | 735 | WP_121480154.1 | hypothetical protein | - |
| FXN80_RS10705 (FXN80_10705) | 2421679..2422782 | - | 1104 | WP_161130414.1 | hypothetical protein ; Integrase | Integrase |
| FXN80_RS10710 (FXN80_10710) | 2422757..2423026 | - | 270 | WP_161130413.1 | excisionase | - |
| FXN80_RS10715 (FXN80_10715) | 2423085..2423303 | - | 219 | WP_161130412.1 | TraR/DksA C4-type zinc finger protein | - |
| FXN80_RS10720 (FXN80_10720) | 2423356..2424486 | - | 1131 | WP_161130411.1 | recombinase RecT | - |
| FXN80_RS10725 (FXN80_10725) | 2424496..2427198 | - | 2703 | WP_161130410.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| FXN80_RS10730 (FXN80_10730) | 2427438..2427629 | - | 192 | WP_161130409.1 | DUF1482 family protein | - |
| FXN80_RS10735 (FXN80_10735) | 2427629..2427970 | - | 342 | WP_161130408.1 | hypothetical protein | - |
| FXN80_RS10740 (FXN80_10740) | 2428244..2429161 | - | 918 | WP_202438295.1 | hypothetical protein | - |
| FXN80_RS10745 (FXN80_10745) | 2429263..2429655 | - | 393 | WP_161130407.1 | helix-turn-helix domain-containing protein | - |
| FXN80_RS10750 (FXN80_10750) | 2429758..2429988 | + | 231 | WP_161130406.1 | YdaS family helix-turn-helix protein | - |
| FXN80_RS10755 (FXN80_10755) | 2429991..2430500 | + | 510 | WP_161130405.1 | toxin YdaT family protein | - |
| FXN80_RS10760 (FXN80_10760) | 2430524..2430778 | + | 255 | WP_161130404.1 | hypothetical protein | - |
| FXN80_RS10765 (FXN80_10765) | 2430828..2431688 | + | 861 | WP_161130403.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| FXN80_RS10770 (FXN80_10770) | 2431706..2432446 | + | 741 | WP_161130402.1 | ATP-binding protein | - |
| FXN80_RS10775 (FXN80_10775) | 2432799..2433878 | - | 1080 | WP_161130401.1 | DUF3578 domain-containing protein | - |
| FXN80_RS10780 (FXN80_10780) | 2433984..2434445 | - | 462 | WP_161130400.1 | hypothetical protein | - |
| FXN80_RS10785 (FXN80_10785) | 2434788..2435036 | + | 249 | WP_161130399.1 | hypothetical protein | - |
| FXN80_RS10790 (FXN80_10790) | 2435079..2435675 | + | 597 | WP_161130398.1 | DUF1367 family protein | - |
| FXN80_RS10795 (FXN80_10795) | 2435672..2436445 | + | 774 | WP_225622598.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| FXN80_RS10800 (FXN80_10800) | 2436442..2436726 | + | 285 | WP_161130397.1 | DUF1364 domain-containing protein | - |
| FXN80_RS10805 (FXN80_10805) | 2436723..2437082 | + | 360 | WP_161130396.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FXN80_RS10810 (FXN80_10810) | 2437079..2437654 | + | 576 | WP_161130395.1 | DUF1133 family protein | - |
| FXN80_RS10815 (FXN80_10815) | 2437751..2438125 | + | 375 | WP_161130394.1 | hypothetical protein | - |
| FXN80_RS10820 (FXN80_10820) | 2438370..2439218 | + | 849 | WP_161130393.1 | DNA/RNA non-specific endonuclease | - |
| FXN80_RS10825 (FXN80_10825) | 2439303..2439518 | + | 216 | WP_161130423.1 | class II holin family protein | - |
| FXN80_RS10830 (FXN80_10830) | 2439524..2440000 | + | 477 | WP_161130422.1 | lysozyme | - |
| FXN80_RS10835 (FXN80_10835) | 2439982..2440503 | + | 522 | WP_161130392.1 | lysis system i-spanin subunit Rz | - |
| FXN80_RS10840 (FXN80_10840) | 2440938..2441147 | + | 210 | WP_161130391.1 | hypothetical protein | - |
| FXN80_RS10845 (FXN80_10845) | 2441250..2442257 | + | 1008 | WP_161130390.1 | terminase small subunit | - |
| FXN80_RS10850 (FXN80_10850) | 2442232..2443539 | + | 1308 | WP_161130389.1 | terminase family protein | - |
| FXN80_RS10855 (FXN80_10855) | 2443550..2445001 | + | 1452 | WP_161130388.1 | DUF1073 domain-containing protein | - |
| FXN80_RS10860 (FXN80_10860) | 2445033..2445950 | + | 918 | WP_161130421.1 | phage minor head protein | - |
| FXN80_RS10865 (FXN80_10865) | 2445959..2446282 | + | 324 | WP_161130387.1 | hypothetical protein | - |
| FXN80_RS10870 (FXN80_10870) | 2446341..2447726 | + | 1386 | WP_161130386.1 | DUF2213 domain-containing protein | - |
| FXN80_RS10875 (FXN80_10875) | 2447726..2448160 | + | 435 | WP_161130385.1 | hypothetical protein | - |
| FXN80_RS10880 (FXN80_10880) | 2448173..2449204 | + | 1032 | WP_161130384.1 | DUF6260 family protein | - |
| FXN80_RS10885 (FXN80_10885) | 2449242..2449595 | + | 354 | WP_161130383.1 | hypothetical protein | - |
| FXN80_RS10890 (FXN80_10890) | 2449598..2449981 | + | 384 | WP_038667799.1 | hypothetical protein | - |
| FXN80_RS10895 (FXN80_10895) | 2449978..2450148 | + | 171 | WP_237431780.1 | DUF551 domain-containing protein | - |
| FXN80_RS10900 (FXN80_10900) | 2450151..2450501 | + | 351 | WP_161130382.1 | hypothetical protein | - |
| FXN80_RS10905 (FXN80_10905) | 2450504..2450872 | + | 369 | WP_161130381.1 | HK97 gp10 family phage protein | - |
| FXN80_RS10910 (FXN80_10910) | 2450869..2451252 | + | 384 | WP_161130380.1 | hypothetical protein | - |
| FXN80_RS10915 (FXN80_10915) | 2451316..2452059 | + | 744 | WP_161130379.1 | Ig-like domain-containing protein | - |
| FXN80_RS10920 (FXN80_10920) | 2452121..2452798 | + | 678 | WP_161130378.1 | DUF6246 family protein | - |
| FXN80_RS10925 (FXN80_10925) | 2453285..2453602 | + | 318 | WP_237431779.1 | hypothetical protein | - |
| FXN80_RS10930 (FXN80_10930) | 2453612..2454331 | + | 720 | WP_161130376.1 | hypothetical protein | - |
| FXN80_RS10935 (FXN80_10935) | 2454510..2454968 | + | 459 | WP_038918153.1 | IS200-IS605 family transposase IS200F | Transposase |
| FXN80_RS10940 (FXN80_10940) | 2455185..2455679 | - | 495 | WP_161130746.1 | hypothetical protein | - |
| FXN80_RS10945 (FXN80_10945) | 2455942..2456448 | + | 507 | WP_161130745.1 | hypothetical protein | - |
| FXN80_RS10950 (FXN80_10950) | 2456507..2460088 | + | 3582 | WP_161130744.1 | tape measure protein | - |
| FXN80_RS10955 (FXN80_10955) | 2460091..2460441 | + | 351 | WP_161130743.1 | phage tail protein | - |
| FXN80_RS10960 (FXN80_10960) | 2460474..2461178 | + | 705 | WP_161130742.1 | phage minor tail protein L | - |
| FXN80_RS10965 (FXN80_10965) | 2461178..2461906 | + | 729 | WP_161130741.1 | C40 family peptidase | - |
| FXN80_RS10970 (FXN80_10970) | 2461849..2462382 | + | 534 | WP_161130740.1 | tail assembly protein | - |
| FXN80_RS10975 (FXN80_10975) | 2462393..2465557 | + | 3165 | WP_161130739.1 | phage tail protein | - |
| FXN80_RS10980 (FXN80_10980) | 2465560..2466561 | + | 1002 | WP_161130738.1 | DUF6453 family protein | - |
| FXN80_RS10985 (FXN80_10985) | 2466576..2467814 | + | 1239 | WP_161130737.1 | tail fiber domain-containing protein | - |
| FXN80_RS10990 (FXN80_10990) | 2468008..2468235 | - | 228 | WP_161130736.1 | hypothetical protein | - |
| - | 2468387..2468468 | + | 82 | - | - | Antitoxin Detail |
| - | 2468388..2468468 | - | 81 | - | - | Toxin Detail |
| FXN80_RS10995 (FXN80_10995) | 2468638..2468976 | - | 339 | WP_038918972.1 | YebY family protein | - |
| FXN80_RS11000 (FXN80_11000) | 2469518..2469934 | + | 417 | WP_237431813.1 | hypothetical protein | - |
| FXN80_RS11005 (FXN80_11005) | 2470278..2470526 | + | 249 | WP_038918974.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| FXN80_RS11010 (FXN80_11010) | 2470641..2472383 | - | 1743 | WP_107759325.1 | ABC transporter permease subunit | - |
| FXN80_RS11015 (FXN80_11015) | 2472380..2473894 | - | 1515 | WP_161130734.1 | ABC transporter substrate-binding protein | - |
| FXN80_RS11020 (FXN80_11020) | 2473921..2474736 | - | 816 | WP_100849522.1 | Oligopeptide transport ATP-binding protein OppF | VF |
| FXN80_RS11025 (FXN80_11025) | 2474741..2475544 | - | 804 | WP_161130733.1 | ABC transporter ATP-binding protein | - |
| FXN80_RS11030 (FXN80_11030) | 2475873..2477168 | - | 1296 | WP_161130732.1 | YeaH/YhbH family protein | - |
| FXN80_RS11035 (FXN80_11035) | 2477187..2479121 | - | 1935 | WP_038918979.1 | protein kinase YeaG | - |
| FXN80_RS11040 (FXN80_11040) | 2479571..2480320 | + | 750 | WP_161130731.1 | MipA/OmpV family protein | - |
| FXN80_RS11045 (FXN80_11045) | 2480447..2481298 | + | 852 | WP_161130730.1 | aldo/keto reductase | - |
| FXN80_RS11050 (FXN80_11050) | 2481348..2482220 | - | 873 | WP_038918983.1 | D-hexose-6-phosphate mutarotase | - |
| FXN80_RS11055 (FXN80_11055) | 2482434..2483429 | - | 996 | WP_013317844.1 | glyceraldehyde-3-phosphate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|