MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 50665 bp
Accession: NZ_CP092460 Location: 1942442..1993106 Organism: Dickeya fangzhongdai strain AP6 Replicon: chromosome
Accession: NZ_CP092460 Location: 1942442..1993106 Organism: Dickeya fangzhongdai strain AP6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FXN80_RS08570 (FXN80_08570) | 1938116..1939207 | - | 1092 | WP_038918646.1 | alpha/beta hydrolase | - |
| FXN80_RS08575 (FXN80_08575) | 1939289..1940437 | - | 1149 | WP_161130548.1 | iron-containing alcohol dehydrogenase | - |
| FXN80_RS08580 (FXN80_08580) | 1940731..1941741 | + | 1011 | WP_161130547.1 | AraC family transcriptional regulator | - |
| FXN80_RS08585 (FXN80_08585) | 1941788..1942216 | + | 429 | WP_072093575.1 | hypothetical protein | - |
| FXN80_RS08590 (FXN80_08590) | 1942353..1942538 | - | 186 | WP_237431794.1 | hypothetical protein | - |
| FXN80_RS08595 (FXN80_08595) | 1942758..1943096 | + | 339 | WP_237431793.1 | hypothetical protein | - |
| FXN80_RS08600 (FXN80_08600) | 1943471..1944241 | + | 771 | WP_161130546.1 | DUF3800 domain-containing protein | - |
| FXN80_RS08605 (FXN80_08605) | 1944546..1945499 | - | 954 | WP_202438328.1 | hypothetical protein | - |
| FXN80_RS08610 (FXN80_08610) | 1945489..1947285 | - | 1797 | WP_161130545.1 | hypothetical protein | - |
| FXN80_RS08615 (FXN80_08615) | 1947287..1948519 | - | 1233 | WP_202438327.1 | metallophosphoesterase | - |
| FXN80_RS22980 | 1948823..1948951 | + | 129 | WP_009113454.1 | hypothetical protein | - |
| FXN80_RS08620 (FXN80_08620) | 1949017..1951215 | - | 2199 | WP_161130543.1 | DEAD/DEAH box helicase | - |
| FXN80_RS08625 (FXN80_08625) | 1951212..1952531 | - | 1320 | WP_161130542.1 | ATP-binding protein | - |
| FXN80_RS08630 (FXN80_08630) | 1952535..1954844 | - | 2310 | WP_161130541.1 | TerB N-terminal domain-containing protein | - |
| FXN80_RS08635 (FXN80_08635) | 1955561..1956505 | + | 945 | WP_161130540.1 | zincin-like metallopeptidase domain-containing protein | - |
| FXN80_RS08640 (FXN80_08640) | 1956823..1957059 | + | 237 | WP_027712563.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| FXN80_RS08645 (FXN80_08645) | 1957062..1957376 | + | 315 | WP_161130539.1 | CcdB family protein | Toxin Detail |
| FXN80_RS08650 (FXN80_08650) | 1957373..1957507 | - | 135 | Protein_1692 | mobilization protein mobC | - |
| FXN80_RS08655 (FXN80_08655) | 1957675..1957866 | + | 192 | Protein_1693 | baseplate protein | - |
| FXN80_RS08660 (FXN80_08660) | 1957980..1958285 | + | 306 | WP_161130538.1 | hypothetical protein | - |
| FXN80_RS08665 (FXN80_08665) | 1958338..1959057 | + | 720 | WP_161130537.1 | hypothetical protein | - |
| FXN80_RS08670 (FXN80_08670) | 1959422..1960168 | - | 747 | WP_161130536.1 | MobC family replication-relaxation protein | - |
| FXN80_RS08675 (FXN80_08675) | 1960177..1961940 | - | 1764 | WP_161130535.1 | type IV secretion system DNA-binding domain-containing protein | - |
| FXN80_RS08680 (FXN80_08680) | 1962636..1962938 | - | 303 | WP_161130534.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| FXN80_RS08685 (FXN80_08685) | 1962979..1963995 | - | 1017 | WP_161130533.1 | Type IV secretion system protein VirB11 | VF |
| FXN80_RS08690 (FXN80_08690) | 1963985..1965187 | - | 1203 | WP_161130532.1 | Type IV secretion system protein virB10 | VF |
| FXN80_RS08695 (FXN80_08695) | 1965184..1966077 | - | 894 | WP_161130531.1 | P-type conjugative transfer protein VirB9 | - |
| FXN80_RS08700 (FXN80_08700) | 1966074..1966757 | - | 684 | WP_161130530.1 | Type IV secretion system protein PtlE | VF |
| FXN80_RS08705 (FXN80_08705) | 1966978..1968006 | - | 1029 | WP_161130529.1 | type IV secretion system protein | - |
| FXN80_RS08710 (FXN80_08710) | 1968082..1968357 | - | 276 | WP_019844810.1 | EexN family lipoprotein | - |
| FXN80_RS08715 (FXN80_08715) | 1968368..1969087 | - | 720 | WP_161130528.1 | type IV secretion system protein | - |
| FXN80_RS08720 (FXN80_08720) | 1969112..1971859 | - | 2748 | WP_161130527.1 | Type IV secretion system protein virB4 | VF |
| FXN80_RS08725 (FXN80_08725) | 1971869..1972144 | - | 276 | WP_012769221.1 | hypothetical protein | VF |
| FXN80_RS08730 (FXN80_08730) | 1972164..1972811 | - | 648 | WP_161130526.1 | Type IV secretion system protein virB1 | VF |
| FXN80_RS08735 (FXN80_08735) | 1972882..1973115 | - | 234 | WP_161130525.1 | hypothetical protein | - |
| FXN80_RS08740 (FXN80_08740) | 1973992..1974525 | + | 534 | WP_161130524.1 | DUF5706 domain-containing protein | - |
| FXN80_RS08745 (FXN80_08745) | 1974535..1975614 | + | 1080 | WP_237431792.1 | adenylate/guanylate cyclase domain-containing protein | - |
| FXN80_RS08750 (FXN80_08750) | 1975629..1975901 | + | 273 | WP_237431791.1 | hypothetical protein | - |
| FXN80_RS08755 (FXN80_08755) | 1976258..1976461 | - | 204 | WP_161130523.1 | TraR/DksA family transcriptional regulator | - |
| FXN80_RS08760 (FXN80_08760) | 1976451..1977035 | - | 585 | WP_161130522.1 | DUF2857 domain-containing protein | - |
| FXN80_RS08765 (FXN80_08765) | 1977052..1977246 | - | 195 | WP_012769228.1 | AlpA family transcriptional regulator | - |
| FXN80_RS08770 (FXN80_08770) | 1977743..1978000 | - | 258 | WP_012769229.1 | helix-turn-helix transcriptional regulator | - |
| FXN80_RS08775 (FXN80_08775) | 1978114..1978392 | - | 279 | WP_161130521.1 | helix-turn-helix transcriptional regulator | - |
| FXN80_RS08780 (FXN80_08780) | 1978526..1978813 | + | 288 | WP_161130520.1 | helix-turn-helix transcriptional regulator | - |
| FXN80_RS08785 (FXN80_08785) | 1979514..1980032 | + | 519 | WP_013318572.1 | Major exported protein | VF |
| FXN80_RS08790 (FXN80_08790) | 1980147..1982000 | + | 1854 | WP_161131308.1 | Actin cross-linking toxin VgrG1 | VF |
| FXN80_RS08795 (FXN80_08795) | 1982015..1982422 | + | 408 | WP_161131307.1 | DUF1795 domain-containing protein | - |
| FXN80_RS08800 (FXN80_08800) | 1982434..1986759 | + | 4326 | WP_241043411.1 | RHS repeat-associated core domain-containing protein | - |
| FXN80_RS08805 (FXN80_08805) | 1986759..1987127 | + | 369 | WP_161131257.1 | hypothetical protein | - |
| FXN80_RS08810 (FXN80_08810) | 1987379..1988305 | - | 927 | WP_161131258.1 | hypothetical protein | - |
| FXN80_RS08815 (FXN80_08815) | 1989311..1989625 | + | 315 | WP_161131259.1 | DUF736 domain-containing protein | - |
| FXN80_RS08820 (FXN80_08820) | 1989914..1990108 | - | 195 | WP_161131260.1 | AlpA family transcriptional regulator | - |
| FXN80_RS08825 (FXN80_08825) | 1990308..1990580 | - | 273 | WP_012769239.1 | helix-turn-helix transcriptional regulator | - |
| FXN80_RS08830 (FXN80_08830) | 1990729..1991043 | + | 315 | WP_161131263.1 | helix-turn-helix transcriptional regulator | - |
| FXN80_RS08835 (FXN80_08835) | 1991229..1991543 | + | 315 | WP_161131261.1 | helix-turn-helix transcriptional regulator | - |
| FXN80_RS08840 (FXN80_08840) | 1991658..1992929 | - | 1272 | WP_161131262.1 | Prophage integrase IntS ; Integrase | Integrase |
| FXN80_RS08850 (FXN80_08850) | 1993276..1994067 | - | 792 | WP_049855219.1 | DgsA anti-repressor MtfA | - |
| FXN80_RS08860 (FXN80_08860) | 1994653..1995000 | + | 348 | WP_038918678.1 | DUF3168 domain-containing protein | - |
| FXN80_RS08865 (FXN80_08865) | 1995105..1997306 | + | 2202 | WP_161131001.1 | discoidin domain-containing protein | - |
| FXN80_RS08870 (FXN80_08870) | 1997463..1997630 | + | 168 | WP_038918679.1 | YqaE/Pmp3 family membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|