MGE detailed information
MGE type: Prophage MGE length: 24123 bp
Accession: NZ_CP092258 Location: 2661982..2686104 Organism: Salmonella enterica subsp. enterica serovar Indiana strain 15 Replicon: chromosome
Accession: NZ_CP092258 Location: 2661982..2686104 Organism: Salmonella enterica subsp. enterica serovar Indiana strain 15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MF259_RS12830 () | 2657634..2658055 | + | 422 | Protein_2515 | tyrosine-type recombinase/integrase | - |
| MF259_RS12835 () | 2658995..2659795 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| MF259_RS12840 () | 2659824..2659952 | - | 129 | Protein_2517 | helix-turn-helix domain-containing protein | - |
| MF259_RS12850 () | 2660442..2661212 | + | 771 | WP_000758583.1 | transporter substrate-binding domain-containing protein | - |
| MF259_RS12855 () | 2661208..2661396 | + | 189 | Protein_2519 | tail fiber assembly protein | - |
| MF259_RS12860 () | 2661648..2661833 | + | 186 | WP_071787785.1 | PagK family vesicle-borne virulence factor | - |
| MF259_RS12865 () | 2661924..2662033 | - | 110 | Protein_2521 | tail fiber assembly protein | - |
| MF259_RS12870 () | 2662082..2662413 | - | 332 | Protein_2522 | DUF1353 domain-containing protein | - |
| MF259_RS12875 () | 2662519..2663052 | - | 534 | Protein_2523 | DUF4376 domain-containing protein | - |
| MF259_RS12880 () | 2663322..2663972 | + | 651 | Protein_2524 | hypothetical protein ; Integrase | Integrase |
| - | 2664091..2664236 | + | 146 | - | - | Antitoxin Detail |
| - | 2664093..2664196 | - | 104 | - | - | Toxin Detail |
| MF259_RS12885 () | 2664336..2664689 | - | 354 | WP_000722368.1 | YebY family protein | - |
| MF259_RS12890 () | 2664706..2665581 | - | 876 | WP_001579467.1 | copper homeostasis membrane protein CopD | - |
| MF259_RS12895 () | 2665582..2665956 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| MF259_RS12900 () | 2666094..2666324 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| MF259_RS12905 () | 2666432..2667088 | + | 657 | WP_023227121.1 | carbon-nitrogen hydrolase family protein | - |
| MF259_RS12910 () | 2667112..2667810 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| MF259_RS12915 () | 2667845..2669896 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| MF259_RS12920 () | 2670109..2670768 | - | 660 | WP_000024709.1 | tellurite resistance TerB family protein | - |
| MF259_RS12925 () | 2670862..2671215 | - | 354 | WP_001042123.1 | protein YebF | - |
| MF259_RS12930 () | 2671283..2671573 | - | 291 | WP_001579458.1 | DNA damage-inducible protein YebG | - |
| MF259_RS12935 () | 2671704..2672882 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| MF259_RS12940 () | 2672982..2673623 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| MF259_RS12945 () | 2673661..2675472 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| MF259_RS12950 () | 2675707..2677182 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| MF259_RS12955 () | 2677524..2678393 | + | 870 | WP_020898861.1 | MurR/RpiR family transcriptional regulator | - |
| MF259_RS12960 () | 2678517..2679959 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| MF259_RS12965 () | 2680032..2681003 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| MF259_RS12970 () | 2681120..2682439 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| MF259_RS12975 () | 2682455..2683399 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| MF259_RS12980 () | 2683478..2684233 | + | 756 | WP_023227119.1 | Zinc import ATP-binding protein ZnuC | VF |
| MF259_RS12985 () | 2684230..2685015 | + | 786 | WP_023227118.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| MF259_RS12990 () | 2685094..2686104 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| MF259_RS12995 () | 2686113..2686724 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| MF259_RS13000 () | 2687144..2688040 | + | 897 | WP_077909983.1 | DUF4034 domain-containing protein | - |
| MF259_RS13005 () | 2688666..2689265 | + | 600 | WP_023227115.1 | YebB family permuted papain-like enzyme | - |
| MF259_RS13010 () | 2689267..2689788 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| MF259_RS13015 () | 2689825..2690565 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| MF259_RS13020 () | 2690595..2691047 | - | 453 | WP_000653694.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|