MGE detailed information
MGE type: Genomic_island MGE length: 43562 bp
Accession: NZ_CP092258 Location: 1049687..1093248 Organism: Salmonella enterica subsp. enterica serovar Indiana strain 15 Replicon: chromosome
Accession: NZ_CP092258 Location: 1049687..1093248 Organism: Salmonella enterica subsp. enterica serovar Indiana strain 15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MF259_RS04755 () | 1045932..1046477 | + | 546 | WP_023227770.1 | type VI secretion system contractile sheath small subunit | - |
| MF259_RS04760 () | 1046501..1048009 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| MF259_RS04765 () | 1048072..1048182 | + | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| MF259_RS04770 () | 1048309..1048641 | + | 333 | WP_077907151.1 | hypothetical protein | - |
| MF259_RS04775 () | 1048897..1049382 | + | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| MF259_RS04780 () | 1049450..1049644 | + | 195 | Protein_934 | type VI secretion system lipoprotein TssJ | - |
| MF259_RS04785 () | 1049687..1050172 | + | 486 | WP_001081544.1 | type VI secretion system amidase effector protein Tae4 | - |
| MF259_RS04790 () | 1050157..1050540 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| MF259_RS04795 () | 1050683..1051168 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| MF259_RS04800 () | 1051235..1051771 | + | 537 | WP_023227772.1 | hypothetical protein | VF |
| MF259_RS04805 () | 1051775..1053118 | + | 1344 | WP_023227773.1 | hypothetical protein | VF |
| MF259_RS04810 () | 1053115..1054419 | + | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| MF259_RS04815 () | 1054424..1055197 | + | 774 | WP_023227774.1 | Rap1a/Tai family immunity protein | - |
| MF259_RS04820 () | 1055399..1055830 | + | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| MF259_RS04825 () | 1055864..1059733 | + | 3870 | WP_023227775.1 | hypothetical protein | VF |
| MF259_RS04830 () | 1059733..1060500 | + | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| MF259_RS04835 () | 1060543..1061013 | + | 471 | WP_023227776.1 | glucosaminidase domain-containing protein | - |
| MF259_RS04840 () | 1060998..1061459 | + | 462 | WP_001668725.1 | hypothetical protein | - |
| MF259_RS04845 () | 1061495..1061589 | + | 95 | Protein_947 | cytoplasmic protein | - |
| MF259_RS04850 () | 1061586..1062002 | + | 417 | WP_023227777.1 | DUF2195 family protein | - |
| MF259_RS04855 () | 1062026..1062547 | + | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| MF259_RS04860 () | 1062944..1065133 | + | 2190 | WP_023227778.1 | Actin cross-linking toxin VgrG1 | VF |
| MF259_RS04865 () | 1065157..1065603 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| MF259_RS04870 () | 1065622..1069746 | + | 4125 | WP_023227779.1 | RHS repeat-associated core domain-containing protein | - |
| MF259_RS04875 () | 1069747..1070355 | + | 609 | WP_053505599.1 | hypothetical protein | - |
| MF259_RS04880 () | 1070498..1070635 | - | 138 | WP_023227287.1 | hypothetical protein | - |
| MF259_RS04885 () | 1070655..1071500 | + | 846 | Protein_955 | Putative deoxyribonuclease RhsC | VF |
| MF259_RS04890 () | 1071881..1072345 | + | 465 | WP_127201574.1 | hypothetical protein | - |
| MF259_RS04895 () | 1072391..1072642 | - | 252 | WP_131166435.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 1072401..1072626 | + | 226 | - | - | Antitoxin Detail |
| MF259_RS04900 () | 1072706..1073407 | + | 702 | Protein_958 | integrase core domain-containing protein | - |
| MF259_RS04905 () | 1074175..1074669 | + | 495 | WP_051129373.1 | hypothetical protein | - |
| MF259_RS04910 () | 1074802..1075299 | + | 498 | WP_051129374.1 | Saf-pilin pilus formation protein SafA | - |
| MF259_RS04915 () | 1075374..1076114 | + | 741 | WP_051129375.1 | Chaperone protein caf1M | VF |
| MF259_RS04920 () | 1076138..1078648 | + | 2511 | WP_053505593.1 | F1 capsule-anchoring protein | VF |
| MF259_RS04925 () | 1078670..1079140 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| MF259_RS04930 () | 1079548..1080369 | + | 822 | WP_023209688.1 | polysaccharide deacetylase family protein | - |
| MF259_RS04935 () | 1080452..1080692 | + | 241 | Protein_965 | PerC family transcriptional regulator | - |
| MF259_RS04940 () | 1081186..1082133 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| MF259_RS04945 () | 1082253..1082372 | + | 120 | Protein_967 | hypothetical protein | - |
| MF259_RS04950 () | 1082453..1082639 | + | 187 | Protein_968 | IS3 family transposase IS1351 | Transposase |
| MF259_RS04955 () | 1082679..1083363 | - | 685 | Protein_969 | IS21 family transposase ISEc62 | Transposase |
| MF259_RS04960 () | 1084270..1084980 | + | 711 | WP_001009507.1 | hypothetical protein | VF |
| MF259_RS04965 () | 1085088..1085606 | + | 519 | WP_001056552.1 | CFA/I fimbrial subunit B | VF |
| MF259_RS04970 () | 1085715..1088402 | + | 2688 | WP_023226795.1 | hypothetical protein | VF |
| MF259_RS04975 () | 1088437..1089483 | + | 1047 | WP_223228889.1 | CfaE/CblD family pilus tip adhesin | - |
| MF259_RS04980 () | 1089616..1090071 | + | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| MF259_RS04985 () | 1090211..1090828 | + | 618 | WP_023226793.1 | protein TioA | - |
| MF259_RS04990 () | 1091430..1091563 | - | 134 | Protein_976 | transposase | - |
| MF259_RS04995 () | 1091599..1091787 | + | 189 | WP_031603649.1 | hypothetical protein | - |
| MF259_RS05000 () | 1091791..1092510 | - | 720 | WP_023226792.1 | Outer membrane protein PagN | VF |
| MF259_RS05005 () | 1092841..1093248 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| MF259_RS05010 () | 1093619..1094386 | - | 768 | WP_023226791.1 | amidohydrolase | - |
| MF259_RS05015 () | 1094495..1096939 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| MF259_RS05020 () | 1097179..1097757 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|