MGE detailed information
MGE type: Conjugative plasmid MGE length: 84986 bp
Accession: NZ_CP092253 Location: 1..84986 Organism: Escherichia coli strain ISHS7 Replicon: plasmid pISHS7_1
Accession: NZ_CP092253 Location: 1..84986 Organism: Escherichia coli strain ISHS7 Replicon: plasmid pISHS7_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MF614_RS23290 (1) | 1..1032 | + | 1032 | WP_107127226.1 | plasmid replication initiator RepA | - |
| MF614_RS23295 (2363) | 2363..2872 | - | 510 | WP_023156840.1 | hypothetical protein | - |
| MF614_RS23300 (2928) | 2928..3530 | - | 603 | WP_023156839.1 | ProQ/FINO family protein | - |
| MF614_RS23305 (3884) | 3884..4585 | + | 702 | Protein_3 | protein YagA | - |
| MF614_RS23315 (5916) | 5916..6566 | + | 651 | Protein_5 | protein YagA | - |
| MF614_RS23320 (6960) | 6960..7271 | - | 312 | WP_023156836.1 | hypothetical protein | - |
| MF614_RS23325 (7444) | 7444..8034 | - | 591 | WP_239371630.1 | hypothetical protein | - |
| MF614_RS23330 (8034) | 8034..8291 | - | 258 | WP_000343099.1 | hypothetical protein | - |
| MF614_RS23340 (10196) | 10196..10609 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| MF614_RS23345 (10611) | 10611..11420 | + | 810 | WP_239371640.1 | site-specific integrase | - |
| MF614_RS23350 (11530) | 11530..11805 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| MF614_RS23355 (11799) | 11799..12443 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| MF614_RS23360 (12672) | 12672..13643 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| MF614_RS23365 (13648) | 13648..14040 | + | 393 | WP_000340830.1 | plasmid partitioning/stability family protein | - |
| MF614_RS23370 (14045) | 14045..15316 | - | 1272 | WP_023225281.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| MF614_RS23375 (15316) | 15316..15753 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MF614_RS23380 (15750) | 15750..15998 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| MF614_RS23385 (16417) | 16417..17319 | + | 903 | WP_159380379.1 | DUF1281 domain-containing protein | - |
| MF614_RS23390 (17316) | 17316..17627 | + | 312 | WP_032228155.1 | hypothetical protein | - |
| MF614_RS23395 (17703) | 17703..18386 | + | 684 | WP_000086135.1 | DNA methylase | - |
| MF614_RS23400 (18387) | 18387..18608 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| MF614_RS23405 (18589) | 18589..19055 | + | 467 | Protein_23 | DUF1380 family protein | - |
| MF614_RS23410 (19100) | 19100..19876 | + | 777 | WP_239371642.1 | hypothetical protein | - |
| MF614_RS23415 (20293) | 20293..20718 | + | 426 | WP_001198939.1 | antirestriction protein | - |
| MF614_RS23420 (20765) | 20765..21187 | + | 423 | WP_097409994.1 | DUF1380 family protein | - |
| MF614_RS23425 (21184) | 21184..21375 | + | 192 | WP_048264184.1 | hypothetical protein | - |
| MF614_RS23430 (21528) | 21528..21794 | + | 267 | WP_239371644.1 | hypothetical protein | - |
| MF614_RS23435 (22147) | 22147..22674 | + | 528 | WP_155952825.1 | single-stranded DNA-binding protein | - |
| MF614_RS23440 (22732) | 22732..22965 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| MF614_RS23445 (23024) | 23024..24982 | + | 1959 | WP_122990064.1 | ParB/RepB/Spo0J family partition protein | - |
| MF614_RS23450 (25037) | 25037..25471 | + | 435 | WP_023166801.1 | conjugation system SOS inhibitor PsiB | - |
| MF614_RS23455 (25468) | 25468..26187 | + | 720 | WP_044061416.1 | plasmid SOS inhibition protein A | - |
| MF614_RS23460 (26184) | 26184..26780 | + | 597 | WP_000977998.1 | hypothetical protein | - |
| MF614_RS23465 (27243) | 27243..27743 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| MF614_RS23470 (27883) | 27883..28167 | - | 285 | WP_021013251.1 | hypothetical protein | - |
| MF614_RS23475 (28472) | 28472..28906 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| MF614_RS23480 (28998) | 28998..29264 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| MF614_RS23485 (29329) | 29329..30255 | + | 927 | WP_000038335.1 | Recombination-promoting nuclease RpnA | VF |
| MF614_RS23490 (30255) | 30255..30512 | + | 258 | WP_239371646.1 | hypothetical protein | - |
| MF614_RS23495 (30543) | 30543..30794 | - | 252 | WP_000148279.1 | helix-turn-helix transcriptional regulator | - |
| MF614_RS23500 (31326) | 31326..32174 | + | 849 | WP_239371648.1 | DUF4942 domain-containing protein | - |
| MF614_RS23505 (32261) | 32261..32596 | - | 336 | WP_000157093.1 | hypothetical protein | - |
| MF614_RS23510 (32830) | 32830..33162 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| MF614_RS23515 (33173) | 33173..35872 | + | 2700 | WP_042078450.1 | Protein TraI | Relaxase |
| MF614_RS23520 (35909) | 35909..38200 | - | 2292 | WP_077134482.1 | F-type conjugative transfer protein TrbC | - |
| MF614_RS23525 (38193) | 38193..39263 | - | 1071 | WP_239371658.1 | IncI1-type conjugal transfer protein TrbB | - |
| MF614_RS23530 (39282) | 39282..40490 | - | 1209 | WP_077134481.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (40670) | 40670..40727 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (40670) | 40670..40727 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (40670) | 40670..40727 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (40670) | 40670..40727 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| MF614_RS23535 (40782) | 40782..40934 | + | 153 | WP_042078455.1 | Hok/Gef family protein | Toxin Detail |
| MF614_RS23540 (41006) | 41006..41257 | - | 252 | WP_023225283.1 | hypothetical protein | - |
| MF614_RS24580 (41756) | 41756..41851 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| MF614_RS23550 (41916) | 41916..42092 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| MF614_RS23555 (42424) | 42424..42633 | + | 210 | WP_239371660.1 | HEAT repeat domain-containing protein | - |
| MF614_RS23560 (42705) | 42705..43367 | - | 663 | WP_042078443.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| MF614_RS23565 (43437) | 43437..45605 | - | 2169 | WP_042078442.1 | DotA/TraY family protein | - |
| MF614_RS23570 (45702) | 45702..46286 | - | 585 | WP_024247584.1 | IncI1-type conjugal transfer protein TraX | - |
| MF614_RS23575 (46315) | 46315..47517 | - | 1203 | WP_220409072.1 | IncI1-type conjugal transfer protein TraW | - |
| MF614_RS23580 (47484) | 47484..48098 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| MF614_RS23585 (48098) | 48098..51142 | - | 3045 | WP_023156802.1 | IncI1-type conjugal transfer protein TraU | - |
| MF614_RS23590 (51232) | 51232..52032 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| MF614_RS23595 (52016) | 52016..52204 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| MF614_RS23600 (52268) | 52268..52672 | - | 405 | WP_001422824.1 | IncI1-type conjugal transfer protein TraR | - |
| MF614_RS23605 (52723) | 52723..53250 | - | 528 | WP_001055571.1 | conjugal transfer protein TraQ | - |
| MF614_RS23610 (53250) | 53250..53954 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| MF614_RS23615 (53954) | 53954..55243 | - | 1290 | WP_220409071.1 | conjugal transfer protein TraO | - |
| MF614_RS23620 (55246) | 55246..56229 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| MF614_RS23625 (56240) | 56240..56932 | - | 693 | WP_024247581.1 | hypothetical protein | VF |
| MF614_RS23630 (56929) | 56929..57276 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| MF614_RS23635 (57294) | 57294..61061 | - | 3768 | WP_220409070.1 | DUF5710 domain-containing protein | - |
| MF614_RS23640 (61151) | 61151..61702 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| MF614_RS23645 (61717) | 61717..62007 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| MF614_RS23650 (62004) | 62004..63152 | - | 1149 | WP_080242523.1 | putative protein YggR | VF |
| MF614_RS23655 (63149) | 63149..63967 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| MF614_RS23660 (63964) | 63964..64422 | - | 459 | WP_239371599.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| MF614_RS23665 (64817) | 64817..65401 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| MF614_RS23670 (65461) | 65461..66663 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| MF614_RS23675 (66749) | 66749..67573 | - | 825 | WP_023892506.1 | conjugal transfer protein TraE | - |
| MF614_RS23680 (67724) | 67724..68878 | - | 1155 | WP_239371670.1 | site-specific integrase | - |
| MF614_RS23685 (68877) | 68877..69284 | + | 408 | WP_239371601.1 | prepilin, shufflon protein A | - |
| MF614_RS23690 (69281) | 69281..70573 | - | 1293 | WP_001619585.1 | hypothetical protein | VF |
| MF614_RS23695 (70573) | 70573..71229 | - | 657 | WP_001401940.1 | hypothetical protein | VF |
| MF614_RS23700 (71214) | 71214..71774 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| MF614_RS23705 (71784) | 71784..72398 | - | 615 | WP_059333339.1 | hypothetical protein | VF |
| MF614_RS23710 (72415) | 72415..73500 | - | 1086 | WP_079932370.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| MF614_RS23715 (73513) | 73513..75066 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| MF614_RS23720 (75077) | 75077..75529 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| MF614_RS23725 (75516) | 75516..76811 | - | 1296 | WP_239371611.1 | type 4b pilus protein PilO2 | - |
| MF614_RS23730 (76804) | 76804..78486 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| MF614_RS23735 (78500) | 78500..78937 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| MF614_RS23740 (78937) | 78937..80004 | - | 1068 | WP_239371628.1 | hypothetical protein | VF |
| MF614_RS23745 (80681) | 80681..80947 | - | 267 | WP_059333317.1 | hypothetical protein | - |
| MF614_RS23750 (81208) | 81208..81462 | - | 255 | WP_001492938.1 | PilI type IV pilus biogenesis protein | - |
| MF614_RS23755 (81634) | 81634..82317 | - | 684 | WP_079956390.1 | conjugal transfer protein TraC | - |
| MF614_RS23760 (82571) | 82571..83104 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| MF614_RS23765 (83546) | 83546..83833 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| MF614_RS23770 (83871) | 83871..84029 | - | 159 | Protein_96 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|