MGE detailed information
MGE type: Prophage MGE length: 67721 bp
Accession: NZ_CP092252 Location: 2292634..2360354 Organism: Escherichia coli strain ISHS7 Replicon: chromosome
Accession: NZ_CP092252 Location: 2292634..2360354 Organism: Escherichia coli strain ISHS7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MF614_RS11230 (2288532) | 2288532..2289752 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| MF614_RS11235 (2289877) | 2289877..2290572 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| MF614_RS11240 (2290525) | 2290525..2291817 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| MF614_RS11245 (2291977) | 2291977..2292591 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| MF614_RS11250 (2292634) | 2292634..2293488 | - | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| MF614_RS11255 (2293490) | 2293490..2294107 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| MF614_RS11260 (2294118) | 2294118..2296541 | - | 2424 | WP_239371535.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| MF614_RS11265 (2296602) | 2296602..2299028 | - | 2427 | WP_000041554.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| MF614_RS11270 (2299227) | 2299227..2299532 | - | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| MF614_RS11275 (2299640) | 2299640..2300350 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| MF614_RS11280 (2300353) | 2300353..2300913 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| MF614_RS11285 (2300948) | 2300948..2301289 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| MF614_RS11290 (2301424) | 2301424..2301750 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| MF614_RS11295 (2301956) | 2301956..2303170 | + | 1215 | WP_001439078.1 | starvation-sensing protein RspA | - |
| MF614_RS11300 (2303182) | 2303182..2304201 | + | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| MF614_RS11305 (2304389) | 2304389..2305669 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| MF614_RS11310 (2305704) | 2305704..2305955 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| MF614_RS11315 (2306028) | 2306028..2308499 | - | 2472 | WP_000048327.1 | exonuclease | - |
| MF614_RS11320 (2308592) | 2308592..2308783 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| MF614_RS11325 (2308780) | 2308780..2308968 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| MF614_RS11330 (2309536) | 2309536..2309754 | - | 219 | WP_001171952.1 | protein YdfC | - |
| MF614_RS24495 (2309784) | 2309784..2309912 | - | 129 | WP_000344930.1 | protein YdfB | - |
| MF614_RS11335 (2309914) | 2309914..2310069 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| MF614_RS11340 (2310238) | 2310238..2310645 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| MF614_RS11345 (2310727) | 2310727..2310954 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| MF614_RS11350 (2310938) | 2310938..2311459 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| MF614_RS11355 (2311440) | 2311440..2312405 | + | 966 | WP_000054514.1 | hypothetical protein | - |
| MF614_RS11360 (2312446) | 2312446..2312868 | + | 423 | WP_001151260.1 | DUF977 family protein | - |
| MF614_RS11365 (2312865) | 2312865..2313354 | + | 490 | Protein_2229 | class I SAM-dependent methyltransferase | - |
| MF614_RS11370 (2313832) | 2313832..2314252 | + | 421 | Protein_2230 | hypothetical protein | - |
| MF614_RS11375 (2314908) | 2314908..2315957 | + | 1050 | Protein_2231 | ISNCY family transposase ISCARN112 | Transposase |
| MF614_RS11380 (2316078) | 2316078..2316227 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| MF614_RS11385 (2316664) | 2316664..2316996 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| MF614_RS11390 (2317199) | 2317199..2317504 | - | 306 | WP_001326990.1 | protein YdfV | - |
| MF614_RS11395 (2317529) | 2317529..2317768 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| MF614_RS11400 (2317768) | 2317768..2318055 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| MF614_RS11405 (2318127) | 2318127..2318282 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| MF614_RS11410 (2318499) | 2318499..2318750 | + | 252 | WP_000980994.1 | protein Rem | - |
| MF614_RS11415 (2318817) | 2318817..2319095 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| MF614_RS11420 (2319097) | 2319097..2320146 | + | 1050 | WP_129468630.1 | DUF968 domain-containing protein | - |
| MF614_RS11425 (2320160) | 2320160..2320912 | + | 753 | WP_001047135.1 | antitermination protein | - |
| MF614_RS11430 (2321190) | 2321190..2321279 | - | 90 | WP_122985911.1 | hypothetical protein | - |
| MF614_RS11435 (2321334) | 2321334..2321546 | - | 213 | WP_024172454.1 | cold shock-like protein CspF | - |
| MF614_RS11440 (2321845) | 2321845..2322060 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| MF614_RS11445 (2322424) | 2322424..2322594 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| MF614_RS11450 (2322814) | 2322814..2323029 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| MF614_RS11455 (2323034) | 2323034..2323345 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| MF614_RS11460 (2323342) | 2323342..2323875 | + | 534 | WP_001092971.1 | lysozyme | - |
| MF614_RS11465 (2323872) | 2323872..2324369 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| MF614_RS11470 (2324733) | 2324733..2324945 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| MF614_RS11475 (2324956) | 2324956..2325144 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| MF614_RS11480 (2325147) | 2325147..2325212 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| MF614_RS11485 (2325217) | 2325217..2325447 | + | 231 | WP_000720962.1 | protein YnfN | - |
| MF614_RS11490 (2325619) | 2325619..2325792 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| MF614_RS11495 (2325944) | 2325944..2326354 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| MF614_RS11500 (2326412) | 2326412..2326645 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| MF614_RS11505 (2327034) | 2327034..2327579 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| MF614_RS11510 (2327554) | 2327554..2329479 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| MF614_RS11515 (2329476) | 2329476..2329682 | + | 207 | WP_000198149.1 | gpW family protein | - |
| MF614_RS11520 (2329679) | 2329679..2331280 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| MF614_RS11525 (2331261) | 2331261..2332580 | + | 1320 | WP_000123305.1 | S49 family peptidase | - |
| MF614_RS11530 (2332590) | 2332590..2332922 | + | 333 | WP_001295978.1 | head decoration protein | - |
| MF614_RS11535 (2332978) | 2332978..2334003 | + | 1026 | WP_000063280.1 | major capsid protein | - |
| MF614_RS11540 (2334045) | 2334045..2334443 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| MF614_RS11545 (2334455) | 2334455..2334808 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| MF614_RS11550 (2334820) | 2334820..2335398 | + | 579 | WP_000975070.1 | phage tail protein | - |
| MF614_RS11555 (2335395) | 2335395..2335790 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| MF614_RS11560 (2335798) | 2335798..2336538 | + | 741 | WP_239371499.1 | phage tail protein | - |
| MF614_RS11565 (2336554) | 2336554..2336976 | + | 423 | WP_000479150.1 | phage minor tail protein G | - |
| MF614_RS11570 (2336958) | 2336958..2337392 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| MF614_RS11575 (2337385) | 2337385..2339946 | + | 2562 | WP_000840335.1 | phage tail tape measure protein | - |
| MF614_RS11580 (2339943) | 2339943..2340272 | + | 330 | WP_000847360.1 | phage tail protein | - |
| MF614_RS11585 (2340272) | 2340272..2340970 | + | 699 | WP_001152622.1 | phage minor tail protein L | - |
| MF614_RS11590 (2340976) | 2340976..2341719 | + | 744 | WP_001349921.1 | C40 family peptidase | - |
| MF614_RS11595 (2341716) | 2341716..2342288 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| MF614_RS11600 (2342349) | 2342349..2345762 | + | 3414 | WP_047624711.1 | host specificity protein J | - |
| MF614_RS11605 (2345833) | 2345833..2346432 | + | 600 | WP_001233071.1 | Outer membrane protein X | VF |
| MF614_RS11610 (2346497) | 2346497..2349571 | + | 3075 | WP_129468686.1 | phage tail protein | - |
| MF614_RS11615 (2349571) | 2349571..2350146 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| MF614_RS11620 (2350244) | 2350244..2350834 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| MF614_RS11625 (2351151) | 2351151..2351384 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| MF614_RS11630 (2351453) | 2351453..2351566 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| MF614_RS11635 (2352087) | 2352087..2353454 | + | 1368 | Protein_2283 | MHS family MFS transporter | - |
| MF614_RS11640 (2353543) | 2353543..2355003 | + | 1461 | WP_000527751.1 | mannitol dehydrogenase family protein | - |
| MF614_RS11645 (2355039) | 2355039..2355242 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| MF614_RS11650 (2355420) | 2355420..2356106 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| MF614_RS11655 (2356195) | 2356195..2356941 | - | 747 | WP_000636575.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| MF614_RS11660 (2357078) | 2357078..2359123 | + | 2046 | WP_001295662.1 | peptidyl-dipeptidase Dcp | - |
| MF614_RS11665 (2359168) | 2359168..2359686 | - | 519 | WP_001024561.1 | 2-oxo-tetronate isomerase | - |
| MF614_RS11670 (2359962) | 2359962..2360354 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| MF614_RS11675 (2360609) | 2360609..2361499 | + | 891 | WP_000592827.1 | diguanylate cyclase DgcZ | - |
| MF614_RS11680 (2361614) | 2361614..2361718 | - | 105 | WP_211180496.1 | protein MgtT | - |
| MF614_RS11685 (2361718) | 2361718..2361813 | - | 96 | WP_000901367.1 | protein MgtS | - |
| MF614_RS11690 (2361940) | 2361940..2363127 | - | 1188 | WP_001054189.1 | efflux MFS transporter YdeE | - |
| MF614_RS11695 (2363322) | 2363322..2364221 | + | 900 | WP_239371501.1 | O-acetylserine/cysteine exporter | - |
| MF614_RS11700 (2364266) | 2364266..2364964 | - | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|