MGE detailed information
MGE type: Prophage MGE length: 53252 bp
Accession: NZ_CP092055 Location: 1931754..1985005 Organism: Staphylococcus aureus strain USA600 Replicon: chromosome
Accession: NZ_CP092055 Location: 1931754..1985005 Organism: Staphylococcus aureus strain USA600 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AH5611_RS09385 (1927924) | 1927924..1929993 | - | 2070 | WP_164046478.1 | extracellular adherence protein Eap/Map | - |
| AH5611_RS09390 (1930382) | 1930382..1930579 | + | 198 | WP_000239617.1 | phospholipase | - |
| AH5611_RS09395 (1930951) | 1930951..1931130 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| AH5611_RS09400 (1931441) | 1931441..1931701 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| AH5611_RS09405 (1931754) | 1931754..1932104 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| AH5611_RS09410 (1932788) | 1932788..1933237 | + | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
| AH5611_RS09415 (1933332) | 1933332..1933667 | - | 336 | Protein_1818 | SH3 domain-containing protein | - |
| AH5611_RS09420 (1934317) | 1934317..1934808 | - | 492 | WP_000919350.1 | Staphylokinase | VF |
| AH5611_RS09425 (1934999) | 1934999..1935754 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| AH5611_RS09430 (1935766) | 1935766..1936020 | - | 255 | WP_000611512.1 | phage holin | - |
| AH5611_RS09435 (1936072) | 1936072..1936179 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - (1936101) | 1936101..1936240 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1936101) | 1936101..1936240 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1936101) | 1936101..1936240 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1936101) | 1936101..1936240 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| AH5611_RS09440 (1936232) | 1936232..1936408 | - | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| AH5611_RS09445 (1936558) | 1936558..1936854 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| AH5611_RS09450 (1936912) | 1936912..1937199 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| AH5611_RS09455 (1937246) | 1937246..1937398 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| AH5611_RS09460 (1937388) | 1937388..1941173 | - | 3786 | WP_238762292.1 | phage tail spike protein | - |
| AH5611_RS09465 (1941189) | 1941189..1942673 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| AH5611_RS09470 (1942670) | 1942670..1947199 | - | 4530 | WP_069724356.1 | phage tail tape measure protein | - |
| AH5611_RS09475 (1947256) | 1947256..1947393 | - | 138 | WP_172440417.1 | hypothetical protein | - |
| AH5611_RS09480 (1947444) | 1947444..1947794 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| AH5611_RS09485 (1947844) | 1947844..1948074 | - | 231 | Protein_1832 | Ig-like domain-containing protein | - |
| AH5611_RS09490 (1948110) | 1948110..1948754 | - | 645 | WP_000268733.1 | phage tail protein | - |
| AH5611_RS09495 (1948755) | 1948755..1949162 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| AH5611_RS09500 (1949159) | 1949159..1949563 | - | 405 | WP_000114227.1 | HK97 gp10 family phage protein | - |
| AH5611_RS09505 (1949560) | 1949560..1949922 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| AH5611_RS09510 (1949906) | 1949906..1950190 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| AH5611_RS09515 (1950180) | 1950180..1950464 | - | 285 | WP_238762293.1 | hypothetical protein | - |
| AH5611_RS09520 (1950484) | 1950484..1951629 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| AH5611_RS09525 (1951653) | 1951653..1952390 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| AH5611_RS09530 (1952374) | 1952374..1953561 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| AH5611_RS09535 (1953577) | 1953577..1955238 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| AH5611_RS09540 (1955235) | 1955235..1955579 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| AH5611_RS09545 (1955710) | 1955710..1956009 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| AH5611_RS09550 (1956241) | 1956241..1956657 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| AH5611_RS09555 (1956685) | 1956685..1956885 | - | 201 | WP_001622114.1 | DUF1514 family protein | - |
| AH5611_RS09560 (1956885) | 1956885..1957034 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| AH5611_RS09565 (1957031) | 1957031..1957396 | - | 366 | WP_001811577.1 | hypothetical protein | - |
| AH5611_RS09570 (1957413) | 1957413..1957619 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| AH5611_RS09575 (1957616) | 1957616..1957861 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| AH5611_RS09580 (1957898) | 1957898..1958434 | - | 537 | WP_001657251.1 | dUTP diphosphatase | - |
| AH5611_RS09585 (1958427) | 1958427..1958597 | - | 171 | WP_000714403.1 | hypothetical protein | - |
| AH5611_RS09590 (1958584) | 1958584..1958838 | - | 255 | WP_001065097.1 | DUF1024 family protein | - |
| AH5611_RS09595 (1958853) | 1958853..1959095 | - | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| AH5611_RS09600 (1959099) | 1959099..1959467 | - | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| AH5611_RS09605 (1959480) | 1959480..1959884 | - | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AH5611_RS09610 (1959893) | 1959893..1960111 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| AH5611_RS09615 (1960118) | 1960118..1961011 | - | 894 | WP_000148321.1 | DnaD domain-containing protein | - |
| AH5611_RS09620 (1961041) | 1961041..1961511 | - | 471 | WP_000610648.1 | single-stranded DNA-binding protein | - |
| AH5611_RS09625 (1961512) | 1961512..1962129 | - | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| AH5611_RS09630 (1962210) | 1962210..1963131 | - | 922 | Protein_1861 | recombinase RecT | - |
| AH5611_RS09635 (1963133) | 1963133..1965076 | - | 1944 | WP_000700555.1 | AAA family ATPase | - |
| AH5611_RS09640 (1965085) | 1965085..1965348 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| AH5611_RS09645 (1965357) | 1965357..1965617 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| AH5611_RS09650 (1965622) | 1965622..1965924 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| AH5611_RS09655 (1966019) | 1966019..1966180 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| AH5611_RS09660 (1966177) | 1966177..1966500 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| AH5611_RS09665 (1966555) | 1966555..1966935 | + | 381 | WP_000762519.1 | DUF2513 domain-containing protein | - |
| AH5611_RS09670 (1966922) | 1966922..1967119 | - | 198 | WP_001148862.1 | hypothetical protein | - |
| AH5611_RS09675 (1967135) | 1967135..1967887 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| AH5611_RS09680 (1967938) | 1967938..1968267 | + | 330 | WP_000128907.1 | hypothetical protein | - |
| AH5611_RS09685 (1968256) | 1968256..1968471 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| AH5611_RS09690 (1968500) | 1968500..1968748 | - | 249 | Protein_1873 | helix-turn-helix transcriptional regulator | - |
| AH5611_RS09695 (1968745) | 1968745..1968918 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| AH5611_RS09700 (1968881) | 1968881..1969594 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| AH5611_RS09705 (1969610) | 1969610..1970542 | + | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| AH5611_RS09710 (1970548) | 1970548..1970889 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| AH5611_RS09715 (1971093) | 1971093..1971275 | + | 183 | WP_000705248.1 | hypothetical protein | - |
| AH5611_RS09720 (1971375) | 1971375..1971839 | + | 465 | WP_000825947.1 | hypothetical protein | - |
| AH5611_RS09725 (1971898) | 1971898..1972935 | + | 1038 | WP_000857191.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AH5611_RS09730 (1972986) | 1972986..1973816 | + | 831 | Protein_1881 | Phospholipase C | VF |
| AH5611_RS09735 (1974073) | 1974073..1975092 | - | 1020 | WP_154274449.1 | putative leukocidin-like protein 1 | VF |
| AH5611_RS09740 (1975114) | 1975114..1976169 | - | 1056 | WP_000791399.1 | putative leukocidin-like protein 2 | VF |
| AH5611_RS09745 (1976600) | 1976600..1977823 | + | 1224 | WP_000206615.1 | ArgE/DapE family deacylase | - |
| AH5611_RS09750 (1978198) | 1978198..1979526 | + | 1329 | WP_223200608.1 | TrkH family potassium uptake protein | - |
| AH5611_RS09755 (1980058) | 1980058..1981674 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| AH5611_RS09760 (1981750) | 1981750..1982034 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| AH5611_RS09765 (1982209) | 1982209..1982952 | + | 744 | WP_000197627.1 | CPBP family intramembrane metalloprotease MroQ | - |
| AH5611_RS09770 (1982977) | 1982977..1984182 | - | 1206 | WP_069724348.1 | hypothetical protein | VF |
| AH5611_RS09775 (1984379) | 1984379..1985005 | + | 627 | WP_000522375.1 | nitroreductase family protein | - |
| AH5611_RS09780 (1985366) | 1985366..1986151 | + | 786 | WP_000867944.1 | carbon-nitrogen family hydrolase | - |
| AH5611_RS13290 (1986752) | 1986752..1986886 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| AH5611_RS09790 (1987121) | 1987121..1987690 | + | 570 | WP_001105708.1 | accessory gene regulator AgrB | - |
| AH5611_RS09795 (1987687) | 1987687..1987827 | + | 141 | WP_001093929.1 | cyclic lactone autoinducer peptide | - |
| AH5611_RS09800 (1987852) | 1987852..1989144 | + | 1293 | WP_001657119.1 | GHKL domain-containing protein | - |
| AH5611_RS09805 (1989163) | 1989163..1989879 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|