MGE detailed information
MGE type: Prophage MGE length: 58968 bp
Accession: NZ_CP092052 Location: 2017244..2076211 Organism: Staphylococcus aureus strain USA300 Replicon: chromosome
Accession: NZ_CP092052 Location: 2017244..2076211 Organism: Staphylococcus aureus strain USA300 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AH5667_RS14235 () | 2013428..2013718 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| AH5667_RS14240 () | 2013729..2014031 | - | 303 | WP_223200726.1 | MAP domain-containing protein | - |
| AH5667_RS09960 () | 2014056..2015483 | - | 1428 | Protein_1927 | extracellular adherence protein Eap/Map | - |
| AH5667_RS09965 () | 2015872..2016069 | + | 198 | WP_000239610.1 | phospholipase | - |
| AH5667_RS09970 () | 2016441..2016620 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| AH5667_RS09975 () | 2016931..2017191 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| AH5667_RS09980 () | 2017244..2017594 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| AH5667_RS09985 () | 2018279..2018728 | + | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
| AH5667_RS09990 () | 2018823..2019158 | - | 336 | Protein_1933 | SH3 domain-containing protein | - |
| AH5667_RS09995 () | 2019808..2020299 | - | 492 | WP_000919350.1 | Staphylokinase | VF |
| AH5667_RS10000 () | 2020490..2021245 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| AH5667_RS10005 () | 2021257..2021511 | - | 255 | WP_000611512.1 | phage holin | - |
| AH5667_RS10010 () | 2021563..2021670 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 2021592..2021731 | + | 140 | NuclAT_0 | - | - |
| - () | 2021592..2021731 | + | 140 | NuclAT_0 | - | - |
| - () | 2021592..2021731 | + | 140 | NuclAT_0 | - | - |
| - () | 2021592..2021731 | + | 140 | NuclAT_0 | - | - |
| - | 2021600..2021655 | + | 56 | - | - | Antitoxin Detail |
| AH5667_RS10015 () | 2021723..2021899 | - | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| AH5667_RS10020 () | 2022049..2022345 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| AH5667_RS10025 () | 2022403..2022690 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| AH5667_RS10030 () | 2022737..2022889 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| AH5667_RS10035 () | 2022879..2026664 | - | 3786 | WP_000582165.1 | phage tail spike protein | - |
| AH5667_RS10040 () | 2026680..2028164 | - | 1485 | WP_000567394.1 | phage tail family protein | - |
| AH5667_RS10045 () | 2028161..2032690 | - | 4530 | WP_001551779.1 | phage tail tape measure protein | - |
| AH5667_RS10050 () | 2032747..2032884 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| AH5667_RS10055 () | 2032935..2033285 | - | 351 | WP_001096354.1 | hypothetical protein | - |
| AH5667_RS10060 () | 2033335..2033574 | - | 240 | WP_094969769.1 | Ig-like domain-containing protein | - |
| AH5667_RS10065 () | 2033601..2034245 | - | 645 | WP_000260578.1 | phage tail protein | - |
| AH5667_RS10070 () | 2034249..2034653 | - | 405 | WP_000565500.1 | hypothetical protein | - |
| AH5667_RS10075 () | 2034650..2035054 | - | 405 | WP_000114229.1 | HK97 gp10 family phage protein | - |
| AH5667_RS10080 () | 2035051..2035413 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| AH5667_RS10085 () | 2035397..2035681 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| AH5667_RS10090 () | 2035671..2035955 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| AH5667_RS10095 () | 2035975..2037120 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| AH5667_RS10100 () | 2037144..2037881 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| AH5667_RS10105 () | 2037865..2039052 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| AH5667_RS10110 () | 2039068..2040729 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| AH5667_RS10115 () | 2040726..2041070 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| AH5667_RS10120 () | 2041200..2041499 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| AH5667_RS10125 () | 2041731..2042147 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| AH5667_RS10130 () | 2042175..2042375 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| AH5667_RS10135 () | 2042375..2042524 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| AH5667_RS10140 () | 2042521..2042907 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| AH5667_RS10145 () | 2042904..2043110 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| AH5667_RS10150 () | 2043107..2043352 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| AH5667_RS10155 () | 2043389..2043922 | - | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| AH5667_RS10160 () | 2043915..2044157 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| AH5667_RS10165 () | 2044147..2044383 | - | 237 | WP_001065101.1 | DUF1024 family protein | - |
| AH5667_RS10170 () | 2044376..2044747 | - | 372 | WP_001549172.1 | hypothetical protein | - |
| AH5667_RS10175 () | 2044756..2044998 | - | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| AH5667_RS10180 () | 2045002..2045370 | - | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| AH5667_RS10185 () | 2045383..2045787 | - | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AH5667_RS10190 () | 2045796..2046014 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| AH5667_RS10195 () | 2046021..2046914 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| AH5667_RS10200 () | 2046944..2047414 | - | 471 | WP_000934753.1 | single-stranded DNA-binding protein | - |
| AH5667_RS10205 () | 2047415..2048032 | - | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| AH5667_RS10210 () | 2048113..2049033 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| AH5667_RS10215 () | 2049035..2050978 | - | 1944 | WP_238752637.1 | AAA family ATPase | - |
| AH5667_RS10220 () | 2050987..2051250 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| AH5667_RS10225 () | 2051259..2051519 | - | 261 | WP_000291513.1 | DUF1108 family protein | - |
| AH5667_RS10230 () | 2051559..2051819 | - | 261 | WP_001549178.1 | DUF2482 family protein | - |
| AH5667_RS10235 () | 2051914..2052075 | - | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| AH5667_RS10240 () | 2052072..2052392 | - | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| AH5667_RS10245 () | 2052451..2052681 | + | 231 | WP_000549548.1 | hypothetical protein | - |
| AH5667_RS10250 () | 2052678..2052854 | - | 177 | WP_001001356.1 | hypothetical protein | - |
| AH5667_RS10255 () | 2052870..2053622 | - | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| AH5667_RS10260 () | 2053673..2054002 | + | 330 | WP_000180411.1 | hypothetical protein | - |
| AH5667_RS10265 () | 2053991..2054206 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| AH5667_RS10270 () | 2054222..2054485 | - | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| AH5667_RS10275 () | 2054482..2054655 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| AH5667_RS10280 () | 2054618..2055331 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| AH5667_RS10285 () | 2055347..2056279 | + | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| AH5667_RS10290 () | 2056285..2056626 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| AH5667_RS10295 () | 2056830..2057012 | + | 183 | WP_000705246.1 | hypothetical protein | - |
| AH5667_RS10300 () | 2057066..2057803 | + | 738 | WP_001293556.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| AH5667_RS10305 () | 2057994..2059031 | + | 1038 | WP_000857199.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AH5667_RS10310 () | 2059082..2059912 | + | 831 | Protein_1997 | Phospholipase C | VF |
| AH5667_RS10315 () | 2060150..2061166 | - | 1017 | WP_000595324.1 | putative leukocidin-like protein 1 | VF |
| AH5667_RS10320 () | 2061188..2062243 | - | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| AH5667_RS10325 () | 2062678..2063901 | + | 1224 | WP_000206639.1 | ArgE/DapE family deacylase | - |
| AH5667_RS10330 () | 2064273..2065118 | - | 846 | WP_000812010.1 | class I SAM-dependent methyltransferase | - |
| AH5667_RS10335 () | 2065180..2066091 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| AH5667_RS10340 () | 2066231..2067559 | + | 1329 | WP_108630811.1 | TrkH family potassium uptake protein | - |
| AH5667_RS10345 () | 2068412..2068855 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| AH5667_RS10350 () | 2068961..2069397 | - | 437 | Protein_2005 | hypothetical protein | - |
| AH5667_RS10355 () | 2069715..2070305 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| AH5667_RS10360 () | 2070302..2070514 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| AH5667_RS10365 () | 2070575..2071121 | + | 547 | Protein_2008 | site-specific integrase | - |
| AH5667_RS10370 () | 2071216..2072832 | - | 1617 | WP_000240645.1 | 60 kDa chaperonin | VF |
| AH5667_RS10375 () | 2072908..2073192 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| AH5667_RS10380 () | 2073367..2074110 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease MroQ | - |
| AH5667_RS10385 () | 2074135..2075388 | - | 1254 | WP_000120307.1 | hypothetical protein | VF |
| AH5667_RS10390 () | 2075585..2076211 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| AH5667_RS10395 () | 2076572..2077357 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| AH5667_RS14245 () | 2077953..2078087 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| AH5667_RS10405 () | 2078323..2078892 | + | 570 | WP_001105707.1 | accessory gene regulator AgrB | - |
| AH5667_RS10410 () | 2078889..2079029 | + | 141 | WP_001093929.1 | cyclic lactone autoinducer peptide | - |
| AH5667_RS10415 () | 2079054..2080346 | + | 1293 | WP_001549202.1 | GHKL domain-containing protein | - |
| AH5667_RS10420 () | 2080365..2081081 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|