MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 40194 bp
Accession: NZ_CP092039 Location: 2966675..3006868 Organism: Pectobacterium brasiliense strain 130 Replicon: chromosome
Accession: NZ_CP092039 Location: 2966675..3006868 Organism: Pectobacterium brasiliense strain 130 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MBA20_RS13110 (MBA20_13110) | 2962008..2962916 | - | 909 | WP_039516916.1 | lipid kinase | - |
| MBA20_RS13115 (MBA20_13115) | 2963200..2964675 | + | 1476 | WP_119870550.1 | sensor domain-containing diguanylate cyclase | - |
| MBA20_RS13120 (MBA20_13120) | 2964758..2964925 | - | 168 | WP_010280855.1 | YqaE/Pmp3 family membrane protein | - |
| MBA20_RS13125 (MBA20_13125) | 2965080..2965466 | + | 387 | WP_014914890.1 | lysozyme inhibitor LprI family protein | - |
| MBA20_RS13135 (MBA20_13135) | 2965707..2966504 | + | 798 | WP_119870413.1 | DgsA anti-repressor MtfA | - |
| MBA20_RS13145 (MBA20_13145) | 2966852..2968123 | + | 1272 | WP_119870412.1 | hypothetical protein ; Integrase | Integrase |
| MBA20_RS13150 (MBA20_13150) | 2968257..2968571 | - | 315 | WP_025918867.1 | helix-turn-helix transcriptional regulator | - |
| MBA20_RS13155 (MBA20_13155) | 2968757..2969071 | - | 315 | WP_025918866.1 | helix-turn-helix transcriptional regulator | - |
| MBA20_RS13160 (MBA20_13160) | 2969218..2969490 | + | 273 | WP_014699383.1 | helix-turn-helix transcriptional regulator | - |
| MBA20_RS13165 (MBA20_13165) | 2969905..2970822 | + | 918 | WP_119870410.1 | hypothetical protein | - |
| MBA20_RS13170 (MBA20_13170) | 2970976..2971170 | + | 195 | WP_025918863.1 | AlpA family transcriptional regulator | - |
| MBA20_RS13175 (MBA20_13175) | 2971187..2971771 | + | 585 | WP_119870409.1 | DUF2857 domain-containing protein | - |
| MBA20_RS13180 (MBA20_13180) | 2971761..2971970 | + | 210 | WP_119870408.1 | TraR/DksA family transcriptional regulator | - |
| MBA20_RS13185 (MBA20_13185) | 2972115..2973797 | - | 1683 | WP_199679133.1 | ATP-binding protein | - |
| MBA20_RS13190 (MBA20_13190) | 2973814..2975025 | - | 1212 | WP_119870406.1 | hypothetical protein | - |
| MBA20_RS13195 (MBA20_13195) | 2975673..2975894 | + | 222 | WP_039285692.1 | hypothetical protein | - |
| MBA20_RS13200 (MBA20_13200) | 2975973..2976638 | + | 666 | WP_119870405.1 | hypothetical protein | VF |
| MBA20_RS13205 (MBA20_13205) | 2976635..2976916 | + | 282 | WP_086002448.1 | TrbC/VirB2 family protein | - |
| MBA20_RS13210 (MBA20_13210) | 2976926..2979673 | + | 2748 | WP_119870404.1 | hypothetical protein | VF |
| MBA20_RS13215 (MBA20_13215) | 2979697..2980413 | + | 717 | WP_119870403.1 | type IV secretion system protein | - |
| MBA20_RS13220 (MBA20_13220) | 2980424..2980648 | + | 225 | WP_039551199.1 | EexN family lipoprotein | - |
| MBA20_RS13225 (MBA20_13225) | 2980660..2981700 | + | 1041 | WP_119870402.1 | type IV secretion system protein | - |
| MBA20_RS13230 (MBA20_13230) | 2981788..2981928 | + | 141 | WP_025918851.1 | hypothetical protein | - |
| MBA20_RS13235 (MBA20_13235) | 2981921..2982604 | + | 684 | WP_119870401.1 | type IV secretion system protein | - |
| MBA20_RS13240 (MBA20_13240) | 2982604..2983494 | + | 891 | WP_119870400.1 | P-type conjugative transfer protein VirB9 | - |
| MBA20_RS13245 (MBA20_13245) | 2983491..2984714 | + | 1224 | WP_119870399.1 | hypothetical protein | VF |
| MBA20_RS13250 (MBA20_13250) | 2984704..2985720 | + | 1017 | WP_119870398.1 | hypothetical protein | VF |
| MBA20_RS13255 (MBA20_13255) | 2985764..2986066 | + | 303 | WP_119870397.1 | conjugal transfer protein | - |
| MBA20_RS13260 (MBA20_13260) | 2986791..2988653 | + | 1863 | WP_119870396.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MBA20_RS13265 (MBA20_13265) | 2988662..2989408 | + | 747 | WP_119870395.1 | MobC family replication-relaxation protein | - |
| MBA20_RS13270 (MBA20_13270) | 2989605..2990147 | + | 543 | WP_119870394.1 | DUF3916 domain-containing protein | - |
| MBA20_RS13275 (MBA20_13275) | 2990310..2991308 | - | 999 | WP_119870393.1 | hypothetical protein | - |
| MBA20_RS13280 (MBA20_13280) | 2991732..2992046 | - | 315 | WP_119870392.1 | CcdB family protein | Toxin Detail |
| MBA20_RS13285 (MBA20_13285) | 2992049..2992285 | - | 237 | WP_029729596.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| MBA20_RS13290 (MBA20_13290) | 2992605..2993549 | - | 945 | WP_119870391.1 | zincin-like metallopeptidase domain-containing protein | - |
| MBA20_RS13295 (MBA20_13295) | 2994314..2996623 | + | 2310 | WP_119870906.1 | TerB N-terminal domain-containing protein | - |
| MBA20_RS13300 (MBA20_13300) | 2996627..2997940 | + | 1314 | WP_119870905.1 | ATP-binding protein | - |
| MBA20_RS13305 (MBA20_13305) | 2997937..3000135 | + | 2199 | WP_119870904.1 | DEAD/DEAH box helicase | - |
| MBA20_RS22245 | 3000199..3000327 | - | 129 | WP_009113454.1 | hypothetical protein | - |
| MBA20_RS13310 (MBA20_13310) | 3001143..3002741 | - | 1599 | WP_119870903.1 | TIGR04141 family sporadically distributed protein | - |
| MBA20_RS13315 (MBA20_13315) | 3003044..3003365 | + | 322 | Protein_2605 | IS30 family transposase | - |
| MBA20_RS13320 (MBA20_13320) | 3003489..3004757 | - | 1269 | WP_119870902.1 | hypothetical protein | - |
| MBA20_RS13325 (MBA20_13325) | 3004980..3005978 | - | 999 | WP_127110943.1 | hypothetical protein | - |
| MBA20_RS13330 (MBA20_13330) | 3007043..3007207 | + | 165 | Protein_2608 | Arm DNA-binding domain-containing protein | - |
| MBA20_RS13335 (MBA20_13335) | 3007210..3007308 | + | 99 | Protein_2609 | mobilization protein mobC | - |
| MBA20_RS13340 (MBA20_13340) | 3007752..3011786 | + | 4035 | WP_119870900.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|