MGE detailed information
MGE type: Genomic_island MGE length: 13874 bp
Accession: NZ_CP091839 Location: 3946236..3960109 Organism: Escherichia coli strain SWYHX138.261ft Replicon: chromosome
Accession: NZ_CP091839 Location: 3946236..3960109 Organism: Escherichia coli strain SWYHX138.261ft Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L7H22_RS18920 (3942321) | 3942321..3943121 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| L7H22_RS18925 (3943199) | 3943199..3943969 | + | 771 | WP_238059058.1 | class I SAM-dependent methyltransferase | - |
| L7H22_RS18930 (3944017) | 3944017..3945375 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| L7H22_RS18935 (3945447) | 3945447..3946202 | - | 756 | WP_001052753.1 | hydroxyacylglutathione hydrolase | - |
| L7H22_RS18940 (3946236) | 3946236..3946958 | + | 723 | WP_001307587.1 | class I SAM-dependent methyltransferase | - |
| L7H22_RS18945 (3946955) | 3946955..3947422 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| L7H22_RS18950 (3947487) | 3947487..3948218 | + | 732 | WP_001366128.1 | DNA polymerase III subunit epsilon | - |
| L7H22_RS18960 (3948758) | 3948758..3949542 | + | 785 | Protein_3691 | hypothetical protein | - |
| L7H22_RS18965 (3949601) | 3949601..3950298 | + | 698 | WP_238059059.1 | IS1 family transposase IS1R | Transposase |
| L7H22_RS18970 (3950313) | 3950313..3950972 | + | 660 | Protein_3693 | ISAs1 family transposase ISEc1 | Transposase |
| L7H22_RS18975 (3951021) | 3951021..3951284 | + | 264 | WP_044867496.1 | hypothetical protein | - |
| L7H22_RS18980 (3951394) | 3951394..3952164 | - | 771 | WP_097715226.1 | 2-oxoglutaramate amidase | - |
| L7H22_RS18985 (3952345) | 3952345..3952791 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| L7H22_RS18990 (3952834) | 3952834..3955278 | - | 2445 | WP_000973082.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| L7H22_RS18995 (3955518) | 3955518..3956096 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| L7H22_RS19000 (3956302) | 3956302..3957069 | + | 768 | WP_094317940.1 | class II glutamine amidotransferase | - |
| L7H22_RS19005 (3957040) | 3957040..3957780 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| L7H22_RS19010 (3957936) | 3957936..3958214 | - | 279 | WP_000615977.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| L7H22_RS19015 (3958217) | 3958217..3958477 | - | 261 | WP_238059060.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| L7H22_RS19020 (3958687) | 3958687..3959436 | + | 750 | WP_000056850.1 | hypothetical protein | VF |
| L7H22_RS19025 (3959612) | 3959612..3960109 | + | 498 | WP_187207762.1 | REP-associated tyrosine transposase RayT | - |
| L7H22_RS19030 (3960255) | 3960255..3961967 | - | 1713 | Protein_3705 | flagellar biosynthesis protein FlhA | - |
| L7H22_RS19035 (3961939) | 3961939..3962724 | + | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| L7H22_RS19040 (3962795) | 3962795..3963850 | + | 1056 | WP_001226178.1 | DNA polymerase IV | - |
| L7H22_RS19045 (3963847) | 3963847..3964299 | + | 453 | WP_001059872.1 | GNAT family N-acetyltransferase | - |
| L7H22_RS19050 (3964545) | 3964545..3964751 | + | 207 | Protein_3709 | RtcB family protein | - |
| L7H22_RS19055 (3964798) | 3964798..3965079 | + | 282 | Protein_3710 | peptide chain release factor H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|