MGE detailed information
MGE type: Prophage MGE length: 59350 bp
Accession: NZ_CP091836 Location: 3932127..3991476 Organism: Escherichia coli strain SWYHX138.33gt Replicon: chromosome
Accession: NZ_CP091836 Location: 3932127..3991476 Organism: Escherichia coli strain SWYHX138.33gt Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L7H17_RS18840 (3927571) | 3927571..3929289 | - | 1719 | WP_001260716.1 | proline--tRNA ligase | - |
| L7H17_RS18845 (3929400) | 3929400..3930107 | - | 708 | WP_238059056.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| L7H17_RS18850 (3930104) | 3930104..3930508 | - | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| L7H17_RS18855 (3930626) | 3930626..3931441 | - | 816 | WP_000874224.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| L7H17_RS18860 (3931481) | 3931481..3932134 | - | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| L7H17_RS18865 (3932127) | 3932127..3933158 | - | 1032 | WP_238059057.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| L7H17_RS18870 (3933346) | 3933346..3933921 | + | 576 | WP_001140187.1 | Histidine biosynthesis bifunctional protein HisB | VF |
| L7H17_RS18905 (3939679) | 3939679..3940482 | + | 804 | WP_060615951.1 | 2,5-didehydrogluconate reductase DkgB | - |
| L7H17_RS18910 (3940479) | 3940479..3941393 | - | 915 | WP_000648583.1 | HTH-type transcriptional regulator ArgP | VF |
| L7H17_RS18915 (3941634) | 3941634..3942434 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| L7H17_RS18920 (3942512) | 3942512..3943282 | + | 771 | WP_238059058.1 | class I SAM-dependent methyltransferase | - |
| L7H17_RS18925 (3943330) | 3943330..3944688 | - | 1359 | WP_000644685.1 | hypothetical protein | VF |
| L7H17_RS18930 (3944760) | 3944760..3945515 | - | 756 | WP_001052753.1 | hydroxyacylglutathione hydrolase | - |
| L7H17_RS18935 (3945549) | 3945549..3946271 | + | 723 | WP_001307587.1 | class I SAM-dependent methyltransferase | - |
| L7H17_RS18940 (3946268) | 3946268..3946735 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| L7H17_RS18945 (3946800) | 3946800..3947531 | + | 732 | WP_001366128.1 | DNA polymerase III subunit epsilon | - |
| L7H17_RS18955 (3948071) | 3948071..3948855 | + | 785 | Protein_3690 | hypothetical protein | - |
| L7H17_RS18960 (3948914) | 3948914..3949611 | + | 698 | WP_238059059.1 | IS1 family transposase IS1R | Transposase |
| L7H17_RS18965 (3949626) | 3949626..3950285 | + | 660 | Protein_3692 | ISAs1 family transposase ISEc1 | Transposase |
| L7H17_RS18970 (3950334) | 3950334..3950597 | + | 264 | WP_044867496.1 | hypothetical protein | - |
| L7H17_RS18975 (3950707) | 3950707..3951477 | - | 771 | WP_097715226.1 | 2-oxoglutaramate amidase | - |
| L7H17_RS18980 (3951658) | 3951658..3952104 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| L7H17_RS18985 (3952147) | 3952147..3954591 | - | 2445 | WP_000973082.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| L7H17_RS18990 (3954831) | 3954831..3955409 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| L7H17_RS18995 (3955615) | 3955615..3956382 | + | 768 | WP_094317940.1 | class II glutamine amidotransferase | - |
| L7H17_RS19000 (3956353) | 3956353..3957093 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| L7H17_RS19005 (3957249) | 3957249..3957527 | - | 279 | WP_000615977.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| L7H17_RS19010 (3957530) | 3957530..3957790 | - | 261 | WP_238059060.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| L7H17_RS19015 (3958000) | 3958000..3958749 | + | 750 | WP_000056850.1 | hypothetical protein | VF |
| L7H17_RS19020 (3958925) | 3958925..3959422 | + | 498 | WP_187207762.1 | REP-associated tyrosine transposase RayT | - |
| L7H17_RS19025 (3959568) | 3959568..3961280 | - | 1713 | Protein_3704 | hypothetical protein | VF |
| L7H17_RS19030 (3961252) | 3961252..3962037 | + | 786 | WP_000207556.1 | hypothetical protein | VF |
| L7H17_RS19035 (3962108) | 3962108..3963163 | + | 1056 | WP_001226178.1 | DNA polymerase IV | - |
| L7H17_RS19040 (3963160) | 3963160..3963612 | + | 453 | WP_001059872.1 | GNAT family N-acetyltransferase | - |
| L7H17_RS19045 (3963858) | 3963858..3964064 | + | 207 | Protein_3708 | RtcB family protein | - |
| L7H17_RS19050 (3964111) | 3964111..3964392 | + | 282 | Protein_3709 | peptide chain release factor H | - |
| L7H17_RS19055 (3964449) | 3964449..3965906 | - | 1458 | WP_001293010.1 | cytosol nonspecific dipeptidase | - |
| L7H17_RS19060 (3966167) | 3966167..3966625 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (3967221) | 3967221..3967301 | + | 81 | NuclAT_11 | - | - |
| - (3967221) | 3967221..3967301 | + | 81 | NuclAT_11 | - | - |
| - (3967221) | 3967221..3967301 | + | 81 | NuclAT_11 | - | - |
| - (3967221) | 3967221..3967301 | + | 81 | NuclAT_11 | - | - |
| L7H17_RS19065 (3966717) | 3966717..3967961 | + | 1245 | WP_201736122.1 | esterase FrsA | - |
| L7H17_RS19070 (3968019) | 3968019..3968420 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| L7H17_RS19075 (3968459) | 3968459..3969514 | - | 1056 | WP_238059061.1 | phosphoporin PhoE | - |
| L7H17_RS19080 (3969801) | 3969801..3970904 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| L7H17_RS19085 (3970916) | 3970916..3972169 | + | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| L7H17_RS19095 (3972374) | 3972374..3973528 | - | 1155 | WP_223696218.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| L7H17_RS19100 (3973411) | 3973411..3973758 | - | 348 | WP_000390731.1 | helix-turn-helix domain-containing protein | - |
| L7H17_RS19105 (3973940) | 3973940..3974374 | - | 435 | WP_238059062.1 | hypothetical protein | - |
| L7H17_RS19110 (3974371) | 3974371..3974535 | - | 165 | WP_001214446.1 | DUF2737 family protein | - |
| L7H17_RS19115 (3974604) | 3974604..3975301 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| L7H17_RS19120 (3975364) | 3975364..3976221 | + | 858 | WP_238059063.1 | hypothetical protein | - |
| L7H17_RS19125 (3976309) | 3976309..3977763 | - | 1455 | WP_238059064.1 | glucosyltransferase domain-containing protein | - |
| L7H17_RS19130 (3977771) | 3977771..3978682 | - | 912 | WP_089551998.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| L7H17_RS19135 (3978679) | 3978679..3979041 | - | 363 | WP_000915536.1 | bactoprenol glucosyl transferase | - |
| L7H17_RS19140 (3979393) | 3979393..3980529 | - | 1137 | WP_238059065.1 | IS30 family transposase IS30D | Transposase |
| L7H17_RS19145 (3980594) | 3980594..3981313 | + | 720 | Protein_3727 | IS3 family transposase ISEhe3 | Transposase |
| L7H17_RS19150 (3981460) | 3981460..3982440 | - | 981 | WP_238059066.1 | IS5 family transposase IS5D | Transposase |
| L7H17_RS19155 (3982684) | 3982684..3984087 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| L7H17_RS19160 (3984074) | 3984074..3985006 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| L7H17_RS19165 (3985115) | 3985115..3986161 | - | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| L7H17_RS19170 (3986173) | 3986173..3986520 | - | 348 | Protein_3732 | ABC transporter permease subunit | - |
| L7H17_RS19180 (3987290) | 3987290..3987490 | + | 201 | Protein_3734 | 2-methylcitrate dehydratase | - |
| L7H17_RS19185 (3987530) | 3987530..3989416 | + | 1887 | WP_000010270.1 | propionate--CoA ligase | - |
| L7H17_RS19190 (3990217) | 3990217..3991476 | + | 1260 | WP_000076233.1 | cytosine permease | - |
| L7H17_RS19195 (3991466) | 3991466..3992749 | + | 1284 | WP_238059067.1 | cytosine/isoguanine deaminase | - |
| L7H17_RS19200 (3992882) | 3992882..3993781 | - | 900 | WP_032280356.1 | transcriptional regulator CynR | - |
| L7H17_RS19205 (3993891) | 3993891..3994550 | + | 660 | WP_047082175.1 | carbonic anhydrase CynT | - |
| L7H17_RS19210 (3994581) | 3994581..3995051 | + | 471 | WP_000616247.1 | cyanase | - |
| L7H17_RS19215 (3995084) | 3995084..3996238 | + | 1155 | WP_231206864.1 | cyanate transporter CynX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|