MGE detailed information
MGE type: Genomic_island MGE length: 15743 bp
Accession: NZ_CP091756 Location: 3888714..3904456 Organism: Escherichia coli strain LC-1302-2020 Replicon: chromosome
Accession: NZ_CP091756 Location: 3888714..3904456 Organism: Escherichia coli strain LC-1302-2020 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - (3884764) | 3884764..3884844 | - | 81 | NuclAT_12 | - | - |
| - (3884764) | 3884764..3884844 | - | 81 | NuclAT_12 | - | - |
| - (3884764) | 3884764..3884844 | - | 81 | NuclAT_12 | - | - |
| - (3884764) | 3884764..3884844 | - | 81 | NuclAT_12 | - | - |
| L6507_RS18960 (3884104) | 3884104..3885348 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| L6507_RS18965 (3885440) | 3885440..3885898 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| L6507_RS18970 (3886159) | 3886159..3887616 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| L6507_RS18975 (3887673) | 3887673..3888194 | - | 522 | Protein_3710 | peptide chain release factor H | - |
| L6507_RS18980 (3888190) | 3888190..3888396 | - | 207 | Protein_3711 | RtcB family protein | - |
| L6507_RS18985 (3888714) | 3888714..3889166 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| L6507_RS18990 (3889176) | 3889176..3889574 | - | 399 | WP_001263488.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| L6507_RS18995 (3889577) | 3889577..3889870 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| L6507_RS19000 (3889922) | 3889922..3890977 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| L6507_RS19005 (3891048) | 3891048..3891833 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| L6507_RS19010 (3891805) | 3891805..3893517 | + | 1713 | Protein_3717 | Flagellar biosynthesis protein FlhA | VF |
| L6507_RS19015 (3893741) | 3893741..3894238 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| L6507_RS19020 (3894414) | 3894414..3895163 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| L6507_RS19025 (3895373) | 3895373..3895633 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| L6507_RS19030 (3895636) | 3895636..3895914 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| L6507_RS19035 (3896070) | 3896070..3896810 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| L6507_RS19040 (3896781) | 3896781..3897548 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| L6507_RS19045 (3897754) | 3897754..3898332 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| L6507_RS19050 (3898572) | 3898572..3901016 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| L6507_RS19055 (3901059) | 3901059..3901505 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| L6507_RS19060 (3901686) | 3901686..3902456 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| L6507_RS19065 (3902497) | 3902497..3903633 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| L6507_RS19070 (3904064) | 3904064..3904456 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| L6507_RS19075 (3904434) | 3904434..3908666 | - | 4233 | WP_000508723.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|