MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 75433 bp
Accession: NZ_CP091691 Location: 4416254..4491686 Organism: Escherichia coli strain KMi006 Replicon: chromosome
Accession: NZ_CP091691 Location: 4416254..4491686 Organism: Escherichia coli strain KMi006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L65_RS21370 (4411421) | 4411421..4411876 | + | 456 | WP_001087289.1 | type II secretion system major pseudopilin GspG | - |
| L6L65_RS21375 (4411880) | 4411880..4412443 | + | 564 | WP_001115154.1 | type II secretion system minor pseudopilin GspH | - |
| L6L65_RS21380 (4412440) | 4412440..4412811 | + | 372 | WP_000820113.1 | type II secretion system minor pseudopilin GspI | - |
| L6L65_RS21385 (4412808) | 4412808..4413407 | + | 600 | WP_001255034.1 | type II secretion system minor pseudopilin GspJ | - |
| L6L65_RS21390 (4413410) | 4413410..4414387 | + | 978 | WP_000633209.1 | type II secretion system minor pseudopilin GspK | - |
| L6L65_RS21395 (4414384) | 4414384..4415562 | + | 1179 | WP_000094991.1 | type II secretion system protein GspL | - |
| L6L65_RS21400 (4415564) | 4415564..4416100 | + | 537 | WP_000942785.1 | GspM family type II secretion system protein YghD | - |
| L6L65_RS21405 (4416381) | 4416381..4417223 | - | 843 | WP_022645115.1 | DUF4942 domain-containing protein | - |
| L6L65_RS21410 (4417308) | 4417308..4417502 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| L6L65_RS21415 (4417581) | 4417581..4417730 | - | 150 | Protein_4198 | DUF5983 family protein | - |
| L6L65_RS21420 (4417727) | 4417727..4418104 | - | 378 | WP_029701676.1 | TA system toxin CbtA family protein | Toxin Detail |
| L6L65_RS21425 (4418194) | 4418194..4418562 | - | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| L6L65_RS21430 (4418725) | 4418725..4418946 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| L6L65_RS21435 (4419011) | 4419011..4419487 | - | 477 | WP_240723978.1 | RadC family protein | - |
| L6L65_RS21440 (4419503) | 4419503..4419982 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| L6L65_RS21445 (4420248) | 4420248..4421066 | - | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| L6L65_RS21450 (4421156) | 4421156..4421389 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| L6L65_RS21455 (4421395) | 4421395..4422072 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| L6L65_RS21460 (4422220) | 4422220..4422900 | - | 681 | WP_029702103.1 | WYL domain-containing protein | - |
| L6L65_RS21465 (4423103) | 4423103..4423987 | - | 885 | WP_001116795.1 | YfjP family GTPase | - |
| L6L65_RS21470 (4424088) | 4424088..4425311 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| L6L65_RS21475 (4426474) | 4426474..4427004 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| L6L65_RS21480 (4427674) | 4427674..4428405 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| L6L65_RS21485 (4428926) | 4428926..4429378 | + | 453 | WP_000558152.1 | acyltransferase | - |
| L6L65_RS21490 (4429914) | 4429914..4430849 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| L6L65_RS21495 (4430842) | 4430842..4431777 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| L6L65_RS21500 (4431861) | 4431861..4433111 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| L6L65_RS21505 (4433130) | 4433130..4434224 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| L6L65_RS25175 (4434615) | 4434615..4434740 | - | 126 | WP_258228948.1 | hypothetical protein | - |
| L6L65_RS21510 (4435570) | 4435570..4436136 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| L6L65_RS21515 (4436394) | 4436394..4436969 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| L6L65_RS21520 (4437038) | 4437038..4437271 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| L6L65_RS25180 (4437268) | 4437268..4437393 | + | 126 | WP_001342704.1 | hypothetical protein | - |
| L6L65_RS21525 (4437522) | 4437522..4437584 | + | 63 | Protein_4222 | IS3 family transposase IS2 | Transposase |
| L6L65_RS21530 (4437576) | 4437576..4437836 | - | 261 | Protein_4223 | IS3 family transposase IS2 | Transposase |
| L6L65_RS21535 (4437927) | 4437927..4439084 | + | 1158 | Protein_4224 | Multidrug resistance protein MdtB | VF |
| L6L65_RS21540 (4439184) | 4439184..4439855 | + | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| L6L65_RS21545 (4440043) | 4440043..4441011 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| L6L65_RS21550 (4441055) | 4441055..4441237 | + | 183 | WP_276323146.1 | helix-turn-helix domain-containing protein | - |
| L6L65_RS21555 (4441594) | 4441594..4442139 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| L6L65_RS21560 (4442184) | 4442184..4443335 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| L6L65_RS21565 (4443464) | 4443464..4444519 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| L6L65_RS21570 (4444536) | 4444536..4445798 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| L6L65_RS21575 (4446348) | 4446348..4446869 | - | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| L6L65_RS21580 (4446897) | 4446897..4447433 | - | 537 | WP_237442070.1 | maturase | - |
| L6L65_RS21585 (4447922) | 4447922..4448827 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| L6L65_RS21590 (4448964) | 4448964..4449881 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| L6L65_RS21595 (4449990) | 4449990..4452542 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| L6L65_RS21600 (4452591) | 4452591..4453166 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| L6L65_RS21605 (4453177) | 4453177..4453476 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| L6L65_RS21610 (4453500) | 4453500..4455017 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| L6L65_RS21615 (4455078) | 4455078..4455863 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| L6L65_RS21620 (4455885) | 4455885..4456166 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| L6L65_RS21625 (4456451) | 4456451..4457647 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| L6L65_RS21630 (4457676) | 4457676..4458173 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| L6L65_RS21635 (4458201) | 4458201..4458470 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| L6L65_RS21640 (4458482) | 4458482..4459207 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| L6L65_RS21645 (4459191) | 4459191..4459949 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| L6L65_RS21650 (4460004) | 4460004..4460690 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| L6L65_RS21655 (4460830) | 4460830..4461948 | - | 1119 | WP_000135343.1 | hypothetical protein | VF |
| L6L65_RS21660 (4462305) | 4462305..4462805 | + | 501 | Protein_4249 | DNA-binding protein | - |
| L6L65_RS21665 (4462901) | 4462901..4463134 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| L6L65_RS21670 (4463187) | 4463187..4463378 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| L6L65_RS21675 (4464099) | 4464099..4464359 | + | 261 | Protein_4252 | IS3 family transposase ISLad1 | Transposase |
| L6L65_RS21680 (4464502) | 4464502..4466247 | + | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| L6L65_RS21685 (4466403) | 4466403..4466589 | + | 187 | Protein_4254 | hypothetical protein | - |
| L6L65_RS21690 (4466641) | 4466641..4467988 | + | 1348 | Protein_4255 | VasL domain-containing protein | - |
| L6L65_RS21695 (4468105) | 4468105..4468749 | + | 645 | WP_024196335.1 | hypothetical protein | - |
| L6L65_RS21700 (4468890) | 4468890..4470122 | + | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| L6L65_RS21705 (4470107) | 4470107..4470745 | + | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| L6L65_RS21710 (4470824) | 4470824..4471093 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| L6L65_RS21715 (4471114) | 4471114..4471758 | + | 645 | WP_001564034.1 | hypothetical protein | - |
| L6L65_RS21720 (4471823) | 4471823..4472146 | + | 324 | WP_001564033.1 | hypothetical protein | - |
| L6L65_RS21725 (4472194) | 4472194..4472985 | - | 792 | Protein_4262 | ATP-dependent helicase | - |
| L6L65_RS21730 (4472980) | 4472980..4473369 | + | 390 | Protein_4263 | IS3 family transposase | - |
| L6L65_RS21735 (4474042) | 4474042..4475550 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| L6L65_RS21740 (4475634) | 4475634..4476113 | + | 480 | Protein_4265 | IS3 family transposase IS629 | Transposase |
| L6L65_RS21745 (4476125) | 4476125..4476298 | + | 174 | Protein_4266 | hypothetical protein | - |
| L6L65_RS21750 (4476306) | 4476306..4476568 | - | 263 | Protein_4267 | IS3 family transposase IS911 | Transposase |
| L6L65_RS21755 (4476638) | 4476638..4476985 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| L6L65_RS21760 (4477604) | 4477604..4478297 | - | 694 | Protein_4269 | IS1 family transposase IS1N | Transposase |
| L6L65_RS21765 (4478550) | 4478550..4480019 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| L6L65_RS21770 (4480124) | 4480124..4482493 | + | 2370 | WP_000671169.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| L6L65_RS21775 (4482568) | 4482568..4484067 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| L6L65_RS21780 (4484210) | 4484210..4484906 | + | 697 | WP_240723979.1 | IS1 family transposase IS1R | Transposase |
| L6L65_RS21785 (4484923) | 4484923..4485714 | + | 792 | Protein_4274 | IS3 family transposase | - |
| L6L65_RS21790 (4485881) | 4485881..4486432 | + | 552 | WP_001447126.1 | Transcriptional regulator SlyA | VF |
| L6L65_RS21800 (4488126) | 4488126..4489169 | - | 1044 | WP_000147021.1 | hypothetical protein | - |
| L6L65_RS21805 (4489425) | 4489425..4490180 | - | 756 | Protein_4278 | hypothetical protein ; Integrase | Integrase |
| L6L65_RS21810 (4490237) | 4490237..4490933 | + | 697 | WP_001390273.1 | IS1 family transposase IS1R | Transposase |
| L6L65_RS21815 (4490948) | 4490948..4491466 | - | 519 | Protein_4280 | Arm DNA-binding domain-containing protein | - |
| L6L65_RS21825 (4491845) | 4491845..4492552 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| L6L65_RS21830 (4492705) | 4492705..4492788 | + | 84 | WP_211180506.1 | protein YqgH | - |
| L6L65_RS21835 (4492950) | 4492950..4495085 | + | 2136 | WP_001326492.1 | ornithine decarboxylase | - |
| L6L65_RS21840 (4495135) | 4495135..4496391 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|