MGE detailed information
MGE type: Conjugative plasmid MGE length: 100833 bp
Accession: NZ_CP091684 Location: 1..100833 Organism: Escherichia coli strain KKo003 Replicon: plasmid pKKo003_1
Accession: NZ_CP091684 Location: 1..100833 Organism: Escherichia coli strain KKo003 Replicon: plasmid pKKo003_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L54_RS24160 (L6L54_24160) | 1..879 | + | 879 | WP_000729439.1 | incFII family plasmid replication initiator RepA | - |
| L6L54_RS24165 (L6L54_24165) | 1778..2062 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| L6L54_RS24170 (L6L54_24170) | 2062..2337 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L6L54_RS24175 (L6L54_24175) | 2443..2640 | + | 198 | Protein_3 | hypothetical protein | - |
| L6L54_RS24180 (L6L54_24180) | 2909..3175 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| L6L54_RS24185 (L6L54_24185) | 3175..3393 | - | 219 | Protein_5 | hypothetical protein | - |
| L6L54_RS24190 (L6L54_24190) | 3421..4023 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| L6L54_RS24195 (L6L54_24195) | 4199..5251 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| L6L54_RS24200 (L6L54_24200) | 5464..6054 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| L6L54_RS24205 (L6L54_24205) | 6054..6308 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| L6L54_RS24210 (L6L54_24210) | 6540..8039 | + | 1500 | WP_001297030.1 | RES family NAD+ phosphorylase | - |
| L6L54_RS24215 (L6L54_24215) | 8064..8927 | - | 864 | WP_000654832.1 | hypothetical protein | - |
| L6L54_RS24220 (L6L54_24220) | 9450..9863 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| L6L54_RS24225 (L6L54_24225) | 9865..10644 | + | 780 | WP_001164196.1 | site-specific integrase | - |
| L6L54_RS24230 (L6L54_24230) | 10824..11468 | + | 645 | WP_001144036.1 | ParA family protein | - |
| L6L54_RS24235 (L6L54_24235) | 11555..11863 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| L6L54_RS24240 (L6L54_24240) | 12277..13257 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| L6L54_RS24245 (L6L54_24245) | 13250..13666 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| L6L54_RS24250 (L6L54_24250) | 13668..14942 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| L6L54_RS24255 (L6L54_24255) | 14942..15379 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| L6L54_RS24260 (L6L54_24260) | 15376..15624 | - | 249 | WP_063612146.1 | DinI-like family protein | - |
| L6L54_RS24265 (L6L54_24265) | 15759..16463 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| L6L54_RS24270 (L6L54_24270) | 16516..17313 | - | 798 | Protein_22 | IS91 family transposase ISAzo26 | Transposase |
| L6L54_RS24275 (L6L54_24275) | 17493..18047 | + | 555 | WP_063612062.1 | AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase | - |
| L6L54_RS24280 (L6L54_24280) | 18314..19573 | + | 1260 | WP_001256776.1 | Bicyclomycin resistance protein | ARG |
| L6L54_RS24285 (L6L54_24285) | 19765..20112 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| L6L54_RS24290 (L6L54_24290) | 20106..20315 | + | 210 | Protein_26 | dihydropteroate synthase | - |
| L6L54_RS24295 (L6L54_24295) | 20504..21535 | - | 1032 | WP_014342102.1 | HAMP domain-containing methyl-accepting chemotaxis protein | - |
| L6L54_RS24300 (L6L54_24300) | 21736..22092 | + | 357 | Protein_28 | IS1380 family transposase ISEcp1 | Transposase |
| L6L54_RS24310 (L6L54_24310) | 22861..23664 | + | 804 | Protein_30 | IS1380 family transposase ISEcp1 | Transposase |
| L6L54_RS24315 (L6L54_24315) | 23721..24689 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| L6L54_RS24320 (L6L54_24320) | 24724..25599 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| L6L54_RS24325 (L6L54_24325) | 25957..26190 | + | 234 | Protein_33 | hypothetical protein | - |
| L6L54_RS24330 (L6L54_24330) | 26187..26498 | + | 312 | WP_032159977.1 | hypothetical protein | - |
| L6L54_RS24335 (L6L54_24335) | 26575..27258 | + | 684 | WP_000086159.1 | DNA methylase | - |
| L6L54_RS24340 (L6L54_24340) | 27259..27480 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| L6L54_RS24345 (L6L54_24345) | 27410..27928 | + | 519 | WP_223350510.1 | DUF1380 family protein | - |
| L6L54_RS24350 (L6L54_24350) | 27973..28587 | + | 615 | WP_001006231.1 | hypothetical protein | - |
| L6L54_RS24355 (L6L54_24355) | 29002..29427 | + | 426 | WP_001198879.1 | antirestriction protein | - |
| L6L54_RS24360 (L6L54_24360) | 29474..29896 | + | 423 | WP_000271719.1 | DUF1380 family protein | - |
| L6L54_RS24365 (L6L54_24365) | 29893..30084 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| L6L54_RS24370 (L6L54_24370) | 30237..30470 | + | 234 | WP_005006793.1 | hypothetical protein | - |
| L6L54_RS24375 (L6L54_24375) | 30854..31381 | + | 528 | WP_001297042.1 | single-stranded DNA-binding protein | - |
| L6L54_RS24380 (L6L54_24380) | 31439..31672 | + | 234 | WP_000006016.1 | DUF905 domain-containing protein | - |
| L6L54_RS24385 (L6L54_24385) | 31731..33689 | + | 1959 | WP_001145482.1 | ParB/RepB/Spo0J family partition protein | - |
| L6L54_RS24390 (L6L54_24390) | 33744..34178 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| L6L54_RS24395 (L6L54_24395) | 34175..34894 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| L6L54_RS24400 (L6L54_24400) | 34891..35487 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| L6L54_RS24405 (L6L54_24405) | 35949..36449 | + | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| L6L54_RS24410 (L6L54_24410) | 37181..37615 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| L6L54_RS24415 (L6L54_24415) | 37707..37973 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| L6L54_RS24420 (L6L54_24420) | 38150..38539 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| L6L54_RS24425 (L6L54_24425) | 38536..39426 | + | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| L6L54_RS24430 (L6L54_24430) | 39426..39671 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| L6L54_RS24435 (L6L54_24435) | 39702..39953 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| L6L54_RS24440 (L6L54_24440) | 40533..41381 | + | 849 | WP_224171291.1 | DUF4942 domain-containing protein | - |
| L6L54_RS24445 (L6L54_24445) | 41466..41801 | - | 336 | WP_000157091.1 | hypothetical protein | - |
| L6L54_RS24450 (L6L54_24450) | 42034..42366 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| L6L54_RS24455 (L6L54_24455) | 42378..45089 | + | 2712 | WP_052984280.1 | Protein TraI | Relaxase |
| L6L54_RS24460 (L6L54_24460) | 45157..45519 | + | 363 | Protein_60 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| L6L54_RS24465 (L6L54_24465) | 45587..46567 | + | 981 | WP_052990530.1 | IS5 family transposase ISKpn26 | Transposase |
| L6L54_RS24470 (L6L54_24470) | 46717..46788 | + | 72 | Protein_62 | tolA family protein | - |
| L6L54_RS24475 (L6L54_24475) | 46886..47116 | - | 231 | WP_065406859.1 | hypothetical protein | - |
| L6L54_RS24480 (L6L54_24480) | 47583..49886 | - | 2304 | WP_000077663.1 | F-type conjugative transfer protein TrbC | - |
| L6L54_RS24485 (L6L54_24485) | 49867..50991 | - | 1125 | WP_000152381.1 | DsbC family protein | - |
| L6L54_RS24490 (L6L54_24490) | 50988..52331 | - | 1344 | WP_032253916.1 | hypothetical protein | - |
| L6L54_RS25485 | 53128..53223 | + | 96 | WP_001363141.1 | DinQ-like type I toxin DqlB | - |
| L6L54_RS24500 (L6L54_24500) | 53286..53462 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| L6L54_RS24505 (L6L54_24505) | 53612..54079 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| L6L54_RS24510 (L6L54_24510) | 54238..54861 | + | 624 | WP_001155247.1 | helix-turn-helix domain-containing protein | - |
| L6L54_RS24515 (L6L54_24515) | 55059..55274 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| L6L54_RS24520 (L6L54_24520) | 55278..55646 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| L6L54_RS24525 (L6L54_24525) | 55937..56194 | - | 258 | WP_240749178.1 | hypothetical protein | - |
| L6L54_RS24535 (L6L54_24535) | 57823..57975 | + | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| L6L54_RS24540 (L6L54_24540) | 58113..59699 | - | 1587 | WP_000004564.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| L6L54_RS24545 (L6L54_24545) | 59973..60626 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L6L54_RS24550 (L6L54_24550) | 60714..62879 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| L6L54_RS24555 (L6L54_24555) | 62954..63523 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| L6L54_RS24560 (L6L54_24560) | 63520..64725 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| L6L54_RS24565 (L6L54_24565) | 64683..65303 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| L6L54_RS24570 (L6L54_24570) | 65303..68347 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| L6L54_RS24575 (L6L54_24575) | 68642..69460 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| L6L54_RS25490 | 69375..69626 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| L6L54_RS24585 (L6L54_24585) | 69683..70081 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| L6L54_RS24590 (L6L54_24590) | 70128..70658 | - | 531 | WP_000987023.1 | conjugal transfer protein TraQ | - |
| L6L54_RS24595 (L6L54_24595) | 70655..71368 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| L6L54_RS24600 (L6L54_24600) | 71365..72696 | - | 1332 | WP_001288254.1 | conjugal transfer protein TraO | - |
| L6L54_RS24605 (L6L54_24605) | 72700..73674 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| L6L54_RS24610 (L6L54_24610) | 73685..74380 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| L6L54_RS24615 (L6L54_24615) | 74392..74742 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| L6L54_RS24620 (L6L54_24620) | 74759..78820 | - | 4062 | WP_000842447.1 | DUF5710 domain-containing protein | - |
| L6L54_RS24625 (L6L54_24625) | 78884..79174 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| L6L54_RS24630 (L6L54_24630) | 79171..80319 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| L6L54_RS24635 (L6L54_24635) | 80303..81139 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| L6L54_RS24640 (L6L54_24640) | 81136..81594 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| L6L54_RS24645 (L6L54_24645) | 81698..82900 | - | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| L6L54_RS24650 (L6L54_24650) | 83002..83823 | - | 822 | WP_000845373.1 | hypothetical protein | - |
| L6L54_RS24655 (L6L54_24655) | 83988..84182 | - | 195 | Protein_99 | integrase | - |
| L6L54_RS24660 (L6L54_24660) | 84296..85657 | - | 1362 | WP_001168171.1 | hypothetical protein | VF |
| L6L54_RS24665 (L6L54_24665) | 85675..86301 | - | 627 | WP_000939244.1 | prepilin peptidase | - |
| L6L54_RS24670 (L6L54_24670) | 86317..86802 | - | 486 | WP_063612151.1 | hypothetical protein | VF |
| L6L54_RS24675 (L6L54_24675) | 86847..87383 | - | 537 | WP_000111534.1 | hypothetical protein | VF |
| L6L54_RS24680 (L6L54_24680) | 87445..88539 | - | 1095 | WP_000697158.1 | type II secretion system F family protein | - |
| L6L54_RS24685 (L6L54_24685) | 88541..90049 | - | 1509 | WP_000880807.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| L6L54_RS24690 (L6L54_24690) | 90152..90610 | - | 459 | WP_000095885.1 | hypothetical protein | VF |
| L6L54_RS24695 (L6L54_24695) | 90600..91895 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| L6L54_RS24700 (L6L54_24700) | 91916..93535 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| L6L54_RS24705 (L6L54_24705) | 93567..94004 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| L6L54_RS24710 (L6L54_24710) | 94008..95078 | - | 1071 | WP_000730428.1 | hypothetical protein | VF |
| L6L54_RS24715 (L6L54_24715) | 95305..95640 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| L6L54_RS24720 (L6L54_24720) | 95756..95998 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| L6L54_RS24725 (L6L54_24725) | 96079..97773 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| L6L54_RS24730 (L6L54_24730) | 97800..98420 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| L6L54_RS24735 (L6L54_24735) | 98687..99349 | - | 663 | WP_000154141.1 | hypothetical protein | - |
| L6L54_RS24740 (L6L54_24740) | 99490..99996 | - | 507 | WP_001335626.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|