MGE detailed information
MGE type: Genomic_island MGE length: 59451 bp
Accession: NZ_CP091673 Location: 3750380..3809830 Organism: Escherichia coli strain KKo009 Replicon: chromosome
Accession: NZ_CP091673 Location: 3750380..3809830 Organism: Escherichia coli strain KKo009 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L68_RS19160 (3745751) | 3745751..3746935 | + | 1185 | WP_240729673.1 | tyrosine-type recombinase/integrase | - |
| L6L68_RS19165 (3747085) | 3747085..3748095 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| L6L68_RS19170 (3748191) | 3748191..3750317 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| L6L68_RS19175 (3750380) | 3750380..3751657 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| L6L68_RS19180 (3751657) | 3751657..3753087 | + | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| L6L68_RS19185 (3753282) | 3753282..3754676 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| L6L68_RS19190 (3755254) | 3755254..3755541 | - | 288 | Protein_3530 | integrase core domain-containing protein | - |
| L6L68_RS19195 (3755530) | 3755530..3755891 | - | 362 | Protein_3531 | IS1 family transposase IS1A | Transposase |
| L6L68_RS19200 (3755941) | 3755941..3756975 | + | 1035 | WP_032307461.1 | tetratricopeptide repeat family protein | - |
| L6L68_RS19205 (3757119) | 3757119..3758792 | - | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| L6L68_RS19210 (3758845) | 3758845..3759042 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| L6L68_RS19215 (3759182) | 3759182..3759448 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| L6L68_RS19220 (3759445) | 3759445..3761016 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| L6L68_RS19225 (3761063) | 3761063..3762142 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| L6L68_RS19230 (3762191) | 3762191..3763087 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| L6L68_RS19235 (3763507) | 3763507..3764244 | - | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| L6L68_RS19240 (3764474) | 3764474..3764652 | + | 179 | Protein_3540 | integrase | - |
| L6L68_RS19245 (3764875) | 3764875..3765771 | - | 897 | WP_000499115.1 | hypothetical protein | - |
| L6L68_RS19250 (3765771) | 3765771..3767393 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| L6L68_RS19255 (3767402) | 3767402..3768544 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| L6L68_RS19260 (3768541) | 3768541..3770175 | - | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| L6L68_RS19265 (3770239) | 3770239..3773652 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| L6L68_RS19270 (3774260) | 3774260..3774774 | + | 515 | Protein_3546 | ISL3 family transposase ISEc38 | Transposase |
| L6L68_RS19275 (3775074) | 3775074..3775340 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| L6L68_RS19280 (3775807) | 3775807..3776889 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| L6L68_RS19285 (3776892) | 3776892..3777836 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| L6L68_RS19290 (3777833) | 3777833..3778813 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| L6L68_RS19295 (3778981) | 3778981..3780142 | + | 1162 | Protein_3551 | IS3 family transposase ISEc17 | Transposase |
| L6L68_RS19300 (3780230) | 3780230..3781000 | - | 771 | WP_029402542.1 | VENN motif pre-toxin domain-containing protein | - |
| L6L68_RS19305 (3781842) | 3781842..3783062 | + | 1221 | WP_000410951.1 | arginine deiminase | - |
| L6L68_RS19310 (3783073) | 3783073..3783984 | + | 912 | WP_001564269.1 | carbamate kinase | - |
| L6L68_RS19315 (3784069) | 3784069..3785073 | + | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase, catabolic | VF |
| L6L68_RS19320 (3785121) | 3785121..3786524 | + | 1404 | WP_000514417.1 | YfcC family protein | - |
| L6L68_RS19325 (3786605) | 3786605..3787084 | + | 480 | WP_024191448.1 | ArgR family transcriptional regulator | - |
| L6L68_RS19330 (3787158) | 3787158..3787319 | + | 162 | WP_088459633.1 | pyrBI operon leader peptide | - |
| L6L68_RS19335 (3787322) | 3787322..3787579 | + | 258 | WP_029402540.1 | hypothetical protein | - |
| L6L68_RS19340 (3787731) | 3787731..3788090 | - | 360 | WP_029402539.1 | hypothetical protein | VF |
| L6L68_RS19345 (3788103) | 3788103..3789869 | - | 1767 | WP_029402537.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| L6L68_RS19350 (3790233) | 3790233..3790466 | - | 234 | WP_029402536.1 | hypothetical protein | - |
| L6L68_RS19355 (3790563) | 3790563..3791186 | - | 624 | WP_029402534.1 | hypothetical protein | - |
| L6L68_RS19360 (3791275) | 3791275..3791787 | - | 513 | WP_058128118.1 | hypothetical protein | - |
| L6L68_RS19365 (3792056) | 3792056..3792292 | - | 237 | WP_058128119.1 | AlpA family transcriptional regulator | - |
| L6L68_RS19370 (3792361) | 3792361..3792933 | - | 573 | WP_058128120.1 | hypothetical protein | - |
| L6L68_RS19375 (3793180) | 3793180..3793746 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| L6L68_RS19380 (3795343) | 3795343..3796947 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| L6L68_RS19385 (3797381) | 3797381..3797587 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| L6L68_RS19390 (3797599) | 3797599..3797859 | - | 261 | WP_240729674.1 | hypothetical protein | - |
| L6L68_RS19395 (3797883) | 3797883..3798038 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| L6L68_RS19400 (3798132) | 3798132..3798863 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| L6L68_RS19405 (3800614) | 3800614..3801423 | + | 810 | WP_023155731.1 | hypothetical protein | - |
| L6L68_RS19410 (3801420) | 3801420..3802352 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| L6L68_RS19415 (3802459) | 3802459..3803343 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| L6L68_RS19420 (3803462) | 3803462..3804139 | + | 678 | WP_240729675.1 | hypothetical protein | - |
| L6L68_RS19425 (3804169) | 3804169..3804378 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| L6L68_RS19430 (3804469) | 3804469..3805287 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| L6L68_RS19435 (3805379) | 3805379..3805864 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| L6L68_RS19440 (3805880) | 3805880..3806356 | + | 477 | WP_001186715.1 | RadC family protein | - |
| L6L68_RS19445 (3806425) | 3806425..3806646 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| L6L68_RS19450 (3806726) | 3806726..3807100 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| L6L68_RS19455 (3807147) | 3807147..3807524 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| L6L68_RS19460 (3807521) | 3807521..3808012 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| L6L68_RS19465 (3808024) | 3808024..3808221 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| L6L68_RS19470 (3808306) | 3808306..3809172 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| L6L68_RS19475 (3809244) | 3809244..3809507 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| L6L68_RS19480 (3809504) | 3809504..3809830 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L6L68_RS19485 (3810245) | 3810245..3810781 | - | 537 | WP_000942790.1 | GspM family type II secretion system protein YghD | - |
| L6L68_RS19490 (3810783) | 3810783..3811961 | - | 1179 | WP_021557196.1 | type II secretion system protein GspL | - |
| L6L68_RS19495 (3811958) | 3811958..3812935 | - | 978 | WP_021557197.1 | type II secretion system minor pseudopilin GspK | - |
| L6L68_RS19500 (3812932) | 3812932..3813537 | - | 606 | WP_021557198.1 | type II secretion system minor pseudopilin GspJ | - |
| L6L68_RS19505 (3813534) | 3813534..3813905 | - | 372 | WP_021557199.1 | type II secretion system minor pseudopilin GspI | - |
| L6L68_RS19510 (3813902) | 3813902..3814465 | - | 564 | WP_001613816.1 | type II secretion system minor pseudopilin GspH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|