MGE detailed information
MGE type: Mobilizable plasmid MGE length: 59036 bp
Accession: NZ_CP091638 Location: 1..59036 Organism: Salmonella enterica strain 1063 Replicon: plasmid p1063-3
Accession: NZ_CP091638 Location: 1..59036 Organism: Salmonella enterica strain 1063 Replicon: plasmid p1063-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5504_RS23735 (L5504_23740) | 1..1029 | + | 1029 | WP_001175209.1 | plasmid replication initiator RepA | - |
| L5504_RS23740 (L5504_23745) | 2296..3504 | - | 1209 | WP_044722415.1 | IS200-IS605 family transposase IS609 | Transposase |
| L5504_RS23745 (L5504_23750) | 3905..4057 | + | 153 | Protein_2 | DUF5431 family protein | - |
| L5504_RS23750 (L5504_23755) | 4005..4124 | + | 120 | WP_229002406.1 | Hok/Gef family protein | - |
| L5504_RS23755 (L5504_23760) | 4274..4870 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| L5504_RS23760 (L5504_23765) | 4888..5172 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| L5504_RS23765 (L5504_23770) | 5246..5911 | - | 666 | WP_000532149.1 | division plane positioning ATPase MipZ | - |
| L5504_RS23770 (L5504_23775) | 6499..6828 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| L5504_RS23775 (L5504_23780) | 7232..7747 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| L5504_RS23780 (L5504_23785) | 7851..8393 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| L5504_RS23785 (L5504_23790) | 8390..8644 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| L5504_RS23790 (L5504_23795) | 8641..8883 | + | 243 | WP_268952991.1 | XRE family transcriptional regulator | Antitoxin Detail |
| L5504_RS23795 (L5504_23800) | 9454..9747 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| L5504_RS23800 (L5504_23805) | 10164..10607 | - | 444 | WP_000192625.1 | hypothetical protein | - |
| L5504_RS23805 (L5504_23810) | 10904..11086 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| L5504_RS23810 (L5504_23815) | 11111..11548 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| L5504_RS23815 (L5504_23820) | 11682..11867 | - | 186 | Protein_16 | hypothetical protein | - |
| L5504_RS23820 (L5504_23825) | 12002..12211 | - | 210 | WP_000951714.1 | hypothetical protein | - |
| L5504_RS23825 (L5504_23830) | 12213..12410 | - | 198 | WP_001439049.1 | hypothetical protein | - |
| L5504_RS23830 (L5504_23835) | 12416..12865 | - | 450 | WP_000206698.1 | hypothetical protein | - |
| L5504_RS23835 (L5504_23840) | 12885..13592 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| L5504_RS23840 (L5504_23845) | 13594..14346 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| L5504_RS23845 (L5504_23850) | 14364..14765 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| L5504_RS23850 (L5504_23855) | 15133..15474 | + | 342 | WP_000725934.1 | hypothetical protein | Relaxase |
| L5504_RS23855 (L5504_23860) | 15471..19310 | + | 3840 | WP_097465799.1 | relaxase | - |
| L5504_RS23860 (L5504_23865) | 19353..19793 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| L5504_RS23865 (L5504_23870) | 20139..20345 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| L5504_RS23870 (L5504_23875) | 20414..22579 | - | 2166 | WP_065749864.1 | type IA DNA topoisomerase | - |
| L5504_RS23875 (L5504_23880) | 22584..23159 | - | 576 | WP_191647352.1 | DNA topoisomerase III | - |
| L5504_RS23880 (L5504_23885) | 23329..25005 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| L5504_RS23885 (L5504_23890) | 25100..25632 | - | 533 | Protein_30 | thermonuclease family protein | - |
| L5504_RS23890 (L5504_23895) | 25662..26315 | - | 654 | WP_000572553.1 | hypothetical protein | - |
| L5504_RS23895 (L5504_23900) | 26327..27451 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| L5504_RS23900 (L5504_23905) | 29126..30502 | - | 1377 | WP_247821998.1 | hypothetical protein | VF |
| L5504_RS23905 (L5504_23910) | 30515..31150 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| L5504_RS23910 (L5504_23915) | 31154..31636 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| L5504_RS23915 (L5504_23920) | 31702..32259 | - | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| L5504_RS23920 (L5504_23925) | 32304..33413 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| L5504_RS23925 (L5504_23930) | 33404..34942 | - | 1539 | WP_191647350.1 | Type II secretion system protein E | VF |
| L5504_RS23930 (L5504_23935) | 34967..35461 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| L5504_RS23935 (L5504_23940) | 35445..36755 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| L5504_RS23940 (L5504_23945) | 36806..38449 | - | 1644 | WP_054173908.1 | Outer membrane lipoprotein BfpB | VF |
| L5504_RS23945 (L5504_23950) | 38500..40458 | - | 1959 | WP_086354543.1 | type IV secretory system conjugative DNA transfer family protein | - |
| L5504_RS23950 (L5504_23955) | 40474..41529 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| L5504_RS23955 (L5504_23960) | 41548..42687 | - | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| L5504_RS23960 (L5504_23965) | 42677..43447 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| L5504_RS23965 (L5504_23970) | 43444..44178 | - | 735 | WP_000432283.1 | Type IV secretion system protein virB8 | VF |
| L5504_RS23970 (L5504_23975) | 44178..44312 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| L5504_RS23975 (L5504_23980) | 44344..46701 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| L5504_RS23980 (L5504_23985) | 46707..47027 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| L5504_RS23985 (L5504_23990) | 47098..47388 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| L5504_RS23990 (L5504_23995) | 47388..47972 | - | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| L5504_RS23995 (L5504_24000) | 47993..48391 | - | 399 | WP_001153668.1 | hypothetical protein | - |
| L5504_RS24000 (L5504_24005) | 48510..48947 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| L5504_RS24005 (L5504_24010) | 48953..50188 | - | 1236 | WP_021580486.1 | hypothetical protein | VF |
| L5504_RS24010 (L5504_24015) | 50191..50490 | - | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| L5504_RS24015 (L5504_24020) | 50557..51192 | - | 636 | WP_000835765.1 | hypothetical protein | - |
| L5504_RS24020 (L5504_24025) | 51273..52031 | + | 759 | WP_224482110.1 | DUF5710 domain-containing protein | - |
| L5504_RS24025 (L5504_24030) | 52109..52345 | - | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| L5504_RS24030 (L5504_24035) | 52349..52996 | - | 648 | WP_000653673.1 | hypothetical protein | VF |
| L5504_RS24035 (L5504_24040) | 53002..53988 | - | 987 | WP_001028544.1 | type IV secretion system protein | - |
| L5504_RS24040 (L5504_24045) | 53992..54249 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| L5504_RS24045 (L5504_24050) | 54246..54548 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| L5504_RS24050 (L5504_24055) | 54819..55265 | - | 447 | WP_001243164.1 | hypothetical protein | - |
| L5504_RS24055 (L5504_24060) | 55276..55446 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| L5504_RS24060 (L5504_24065) | 55450..55893 | - | 444 | WP_000964331.1 | NfeD family protein | - |
| L5504_RS24065 (L5504_24070) | 56267..57220 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| L5504_RS24070 (L5504_24075) | 57266..57460 | - | 195 | WP_001127356.1 | DUF1187 family protein | - |
| L5504_RS24075 (L5504_24080) | 57453..57905 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|