MGE detailed information
MGE type: Conjugative plasmid MGE length: 96023 bp
Accession: NZ_CP091593 Location: 1..96023 Organism: Klebsiella pneumoniae strain Nord5-1_R48 Replicon: plasmid pR48_4
Accession: NZ_CP091593 Location: 1..96023 Organism: Klebsiella pneumoniae strain Nord5-1_R48 Replicon: plasmid pR48_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5467_RS02610 (L5467_02615) | 8..1094 | - | 1087 | Protein_0 | four-carbon acid sugar kinase family protein | - |
| L5467_RS02615 (L5467_02620) | 1106..2008 | - | 903 | WP_237437541.1 | NAD(P)-dependent oxidoreductase | - |
| L5467_RS02620 (L5467_02625) | 2270..3031 | + | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| L5467_RS02625 (L5467_02630) | 3052..3912 | - | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| L5467_RS02630 (L5467_02635) | 4049..4753 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| L5467_RS02635 (L5467_02640) | 4795..4905 | + | 111 | Protein_5 | hypothetical protein | - |
| L5467_RS02640 (L5467_02645) | 4902..5513 | - | 612 | WP_016338366.1 | DUF2913 family protein | - |
| L5467_RS02645 (L5467_02650) | 5567..5848 | - | 282 | WP_001568067.1 | hypothetical protein | - |
| L5467_RS02650 (L5467_02655) | 6030..6356 | + | 327 | WP_004201125.1 | C2H2-type zinc finger protein | - |
| L5467_RS02655 (L5467_02660) | 7400..8257 | - | 858 | WP_004152386.1 | incFII family plasmid replication initiator RepA | - |
| L5467_RS02660 (L5467_02665) | 8559..8828 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| L5467_RS02665 (L5467_02670) | 8946..9497 | - | 552 | WP_004152384.1 | Phospholipase D | VF |
| L5467_RS02670 (L5467_02675) | 9601..9909 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| L5467_RS02675 (L5467_02680) | 9906..10556 | - | 651 | WP_004152382.1 | DUF2726 domain-containing protein | - |
| L5467_RS02680 (L5467_02685) | 10612..11256 | - | 645 | WP_004153014.1 | hypothetical protein | - |
| L5467_RS02685 (L5467_02690) | 11306..11908 | - | 603 | WP_015060010.1 | PIN domain-containing protein | - |
| L5467_RS02690 (L5467_02695) | 12069..12662 | - | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
| L5467_RS02695 (L5467_02700) | 12734..13459 | - | 726 | WP_004152379.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| L5467_RS02700 (L5467_02705) | 13539..18800 | - | 5262 | WP_004153015.1 | Multifunctional conjugation protein TraI | Relaxase |
| L5467_RS02705 (L5467_02710) | 18800..21112 | - | 2313 | WP_004152620.1 | type IV conjugative transfer system coupling protein TraD | - |
| L5467_RS02710 (L5467_02715) | 21241..21930 | - | 690 | WP_004198206.1 | hypothetical protein | - |
| L5467_RS02715 (L5467_02720) | 22122..22853 | - | 732 | WP_004152622.1 | conjugal transfer complement resistance protein TraT | - |
| L5467_RS02720 (L5467_02725) | 23037..23585 | - | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| L5467_RS02725 (L5467_02730) | 23598..26447 | - | 2850 | WP_004152624.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| L5467_RS02730 (L5467_02735) | 26447..27826 | - | 1380 | WP_011977731.1 | conjugal transfer pilus assembly protein TraH | - |
| L5467_RS02735 (L5467_02740) | 27804..28247 | - | 444 | WP_004152679.1 | F-type conjugal transfer protein TrbF | - |
| L5467_RS02740 (L5467_02745) | 28293..28850 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| L5467_RS02745 (L5467_02750) | 28822..29061 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| L5467_RS02750 (L5467_02755) | 29072..29824 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| L5467_RS02755 (L5467_02760) | 29845..30171 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| L5467_RS02760 (L5467_02765) | 30184..30432 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| L5467_RS02765 (L5467_02770) | 30410..30664 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| L5467_RS02770 (L5467_02775) | 30696..32651 | - | 1956 | WP_004152673.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| L5467_RS02775 (L5467_02780) | 32710..33348 | - | 639 | WP_011977786.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| L5467_RS02780 (L5467_02785) | 33361..34350 | - | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| L5467_RS02785 (L5467_02790) | 34347..34736 | - | 390 | WP_004152508.1 | hypothetical protein | - |
| L5467_RS02790 (L5467_02795) | 34778..35404 | - | 627 | WP_004152507.1 | type-F conjugative transfer system protein TraW | - |
| L5467_RS02795 (L5467_02800) | 35404..35793 | - | 390 | WP_004152506.1 | type-F conjugative transfer system protein TrbI | - |
| L5467_RS02800 (L5467_02805) | 35793..38432 | - | 2640 | WP_004152505.1 | type IV secretion system protein TraC | - |
| L5467_RS02805 (L5467_02810) | 38504..38902 | - | 399 | WP_011977783.1 | hypothetical protein | - |
| L5467_RS02810 (L5467_02815) | 38910..39152 | - | 243 | WP_004158946.1 | hypothetical protein | - |
| L5467_RS29010 | 39167..39298 | - | 132 | WP_015060082.1 | hypothetical protein | - |
| L5467_RS02815 (L5467_02820) | 39341..39745 | - | 405 | WP_004152503.1 | hypothetical protein | - |
| L5467_RS02820 (L5467_02825) | 39812..40123 | - | 312 | WP_004152502.1 | hypothetical protein | - |
| L5467_RS02825 (L5467_02830) | 40124..40342 | - | 219 | WP_004152501.1 | hypothetical protein | - |
| L5467_RS02830 (L5467_02835) | 40448..40858 | - | 411 | WP_004152499.1 | hypothetical protein | - |
| L5467_RS02835 (L5467_02840) | 40990..41574 | - | 585 | WP_004161368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| L5467_RS02840 (L5467_02845) | 41688..43112 | - | 1425 | WP_004155033.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| L5467_RS02845 (L5467_02850) | 43112..43858 | - | 747 | WP_124038789.1 | type-F conjugative transfer system secretin TraK | - |
| L5467_RS02850 (L5467_02855) | 43844..44404 | - | 561 | Protein_49 | type IV conjugative transfer system protein TraE | - |
| L5467_RS02855 (L5467_02860) | 44424..44729 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| L5467_RS02860 (L5467_02865) | 44743..45111 | - | 369 | WP_004152496.1 | type IV conjugative transfer system pilin TraA | - |
| L5467_RS02865 (L5467_02870) | 45165..45551 | - | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| L5467_RS02870 (L5467_02875) | 45630..46316 | - | 687 | WP_004152494.1 | transcriptional regulator TraJ family protein | - |
| L5467_RS02875 (L5467_02880) | 46490..46888 | - | 399 | WP_004152493.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| L5467_RS02880 (L5467_02885) | 47310..47795 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| L5467_RS02885 (L5467_02890) | 47828..48157 | - | 330 | WP_011977736.1 | DUF5983 family protein | - |
| L5467_RS02890 (L5467_02895) | 48190..49011 | - | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| L5467_RS02895 (L5467_02900) | 49831..50664 | - | 834 | WP_004152751.1 | N-6 DNA methylase | - |
| L5467_RS02900 (L5467_02905) | 50715..50861 | - | 147 | WP_004152750.1 | hypothetical protein | - |
| L5467_RS02905 (L5467_02910) | 50956..51303 | - | 348 | WP_004152749.1 | hypothetical protein | - |
| L5467_RS02910 (L5467_02915) | 51360..51713 | - | 354 | WP_004152748.1 | hypothetical protein | - |
| L5467_RS02915 (L5467_02920) | 52343..52693 | - | 351 | WP_004153414.1 | hypothetical protein | - |
| L5467_RS02920 (L5467_02925) | 52690..52962 | - | 273 | WP_004152661.1 | hypothetical protein | - |
| L5467_RS02925 (L5467_02930) | 53010..53369 | - | 360 | WP_004152660.1 | hypothetical protein | - |
| L5467_RS02930 (L5467_02935) | 53480..53803 | - | 324 | WP_004199367.1 | hypothetical protein | - |
| L5467_RS02935 (L5467_02940) | 53807..54529 | - | 723 | WP_004152658.1 | plasmid SOS inhibition protein A | - |
| L5467_RS02940 (L5467_02945) | 54526..54957 | - | 432 | WP_004152657.1 | conjugation system SOS inhibitor PsiB | - |
| L5467_RS02945 (L5467_02950) | 55003..57012 | - | 2010 | WP_004152656.1 | ParB/RepB/Spo0J family partition protein | - |
| L5467_RS02950 (L5467_02955) | 57081..57323 | - | 243 | WP_004152655.1 | DUF905 domain-containing protein | - |
| L5467_RS02955 (L5467_02960) | 57371..57883 | - | 513 | WP_004152654.1 | single-stranded DNA-binding protein | - |
| L5467_RS02960 (L5467_02965) | 58713..59276 | - | 564 | WP_004152756.1 | methyltransferase | - |
| L5467_RS02965 (L5467_02970) | 59324..60679 | - | 1356 | WP_013054814.1 | DUF3560 domain-containing protein | - |
| L5467_RS02970 (L5467_02975) | 60731..60961 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| L5467_RS02975 (L5467_02980) | 61053..61280 | - | 228 | WP_004152790.1 | hypothetical protein | - |
| L5467_RS02980 (L5467_02985) | 62063..62380 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| L5467_RS02985 (L5467_02990) | 62415..62669 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| L5467_RS02990 (L5467_02995) | 62857..63048 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| L5467_RS02995 (L5467_03000) | 63091..63597 | - | 507 | WP_011977778.1 | antirestriction protein ArdA | - |
| L5467_RS03000 (L5467_03005) | 63640..64068 | - | 429 | WP_023279469.1 | antirestriction protein | - |
| L5467_RS03005 (L5467_03010) | 64748..65515 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| L5467_RS03010 (L5467_03015) | 65569..65988 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| L5467_RS03015 (L5467_03020) | 65998..66219 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| L5467_RS03020 (L5467_03025) | 66219..66920 | - | 702 | WP_004152355.1 | DNA methylase | - |
| L5467_RS03025 (L5467_03030) | 66992..67161 | - | 170 | Protein_84 | hypothetical protein | - |
| L5467_RS03030 (L5467_03035) | 67357..67587 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| L5467_RS03035 (L5467_03040) | 67650..68321 | - | 672 | WP_048322266.1 | plasmid partitioning/stability family protein | - |
| L5467_RS03040 (L5467_03045) | 68324..69295 | - | 972 | WP_032414078.1 | plasmid segregation protein ParM | - |
| L5467_RS03045 (L5467_03050) | 69527..69958 | + | 432 | WP_004152352.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| L5467_RS03050 (L5467_03055) | 69958..71229 | + | 1272 | WP_004152351.1 | Y-family DNA polymerase | - |
| L5467_RS03055 (L5467_03060) | 71630..72526 | + | 897 | WP_004152350.1 | RepB family plasmid replication initiator protein | - |
| L5467_RS03060 (L5467_03065) | 72848..74053 | + | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| L5467_RS03065 (L5467_03070) | 74050..75024 | + | 975 | WP_004152348.1 | ParB family protein | - |
| L5467_RS03070 (L5467_03075) | 75401..75733 | + | 333 | WP_004152347.1 | hypothetical protein | - |
| L5467_RS03075 (L5467_03080) | 76284..78311 | + | 2028 | WP_004152345.1 | class I SAM-dependent DNA methyltransferase | - |
| L5467_RS03080 (L5467_03085) | 78308..79624 | + | 1317 | WP_237437540.1 | restriction endonuclease subunit S | - |
| L5467_RS03085 (L5467_03090) | 79625..82882 | + | 3258 | WP_004152343.1 | DEAD/DEAH box helicase family protein | - |
| L5467_RS03090 (L5467_03095) | 82887..84155 | + | 1269 | WP_004152342.1 | ISL3 family transposase ISKpn25 | Transposase |
| L5467_RS03095 (L5467_03100) | 84275..84748 | + | 474 | WP_004152341.1 | YkgJ family cysteine cluster protein | - |
| L5467_RS03100 (L5467_03105) | 84840..85070 | + | 231 | WP_011977773.1 | hypothetical protein | - |
| L5467_RS03105 (L5467_03110) | 85962..86744 | - | 783 | WP_004152340.1 | site-specific integrase | - |
| L5467_RS03110 (L5467_03115) | 86744..87076 | - | 333 | WP_004152339.1 | hypothetical protein | - |
| L5467_RS03115 (L5467_03120) | 87083..87481 | - | 399 | WP_004171440.1 | hypothetical protein | - |
| L5467_RS03120 (L5467_03125) | 87507..87836 | - | 330 | WP_004152337.1 | hypothetical protein | - |
| L5467_RS03125 (L5467_03130) | 87864..88172 | - | 309 | WP_004152336.1 | hypothetical protein | - |
| L5467_RS03130 (L5467_03135) | 88659..89120 | - | 462 | WP_072093212.1 | hypothetical protein | - |
| L5467_RS03135 (L5467_03140) | 89077..89307 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| L5467_RS03140 (L5467_03145) | 89304..89720 | + | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| L5467_RS03145 (L5467_03150) | 89794..90483 | + | 690 | Protein_108 | AAA family ATPase | - |
| L5467_RS03150 (L5467_03155) | 90538..91235 | + | 698 | WP_223174630.1 | IS1 family transposase ISKpn14 | Transposase |
| L5467_RS03155 (L5467_03160) | 91253..91558 | + | 306 | Protein_110 | putative oxidoreductase YghA | VF |
| L5467_RS03160 (L5467_03165) | 91650..92294 | - | 645 | WP_014386481.1 | Pentapeptide repeat protein | ARG |
| L5467_RS03165 (L5467_03170) | 92389..92790 | - | 402 | Protein_112 | Psp operon transcriptional activator | VF |
| L5467_RS03170 (L5467_03175) | 92866..95883 | - | 3018 | WP_004199413.1 | Tn3 family transposase TnpA_IS3000 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|