MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 149407 bp
Accession: NZ_CP091541 Location: 1..149407 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S46L1 Replicon: plasmid pMCR_S46L1
Accession: NZ_CP091541 Location: 1..149407 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S46L1 Replicon: plasmid pMCR_S46L1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5Z03_RS24640 (L5Z03_24600) | 1..876 | + | 876 | WP_000594612.1 | plasmid replication initiator TrfA | - |
| L5Z03_RS24645 (L5Z03_24605) | 2025..2378 | + | 354 | WP_000423602.1 | hypothetical protein | - |
| L5Z03_RS24650 (L5Z03_24610) | 2429..2746 | + | 318 | WP_000043357.1 | type IV conjugative transfer system protein TraL | - |
| L5Z03_RS24655 (L5Z03_24615) | 2758..3546 | + | 789 | WP_000783153.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| L5Z03_RS24660 (L5Z03_24620) | 3546..4817 | + | 1272 | WP_000592090.1 | type-F conjugative transfer system secretin TraK | - |
| L5Z03_RS24665 (L5Z03_24625) | 4819..5280 | + | 462 | WP_000521240.1 | plasmid transfer protein HtdO | - |
| L5Z03_RS24670 (L5Z03_24630) | 5270..6625 | + | 1356 | WP_000351841.1 | IncHI-type conjugal transfer protein TrhB | - |
| L5Z03_RS24675 (L5Z03_24635) | 6633..7115 | + | 483 | WP_000377633.1 | hypothetical protein | - |
| L5Z03_RS24680 (L5Z03_24640) | 7234..7986 | + | 753 | WP_183079335.1 | protein-disulfide isomerase HtdT | - |
| L5Z03_RS24685 (L5Z03_24645) | 7996..8946 | + | 951 | WP_001022587.1 | IncHI-type conjugal transfer lipoprotein TrhV | - |
| L5Z03_RS24690 (L5Z03_24650) | 8955..11636 | + | 2682 | WP_000387412.1 | TraC family protein | - |
| L5Z03_RS24695 (L5Z03_24655) | 15473..16726 | + | 1254 | WP_032084678.1 | Plasmid partition protein A | VF |
| L5Z03_RS24700 (L5Z03_24660) | 16723..17727 | + | 1005 | WP_032192066.1 | ParB family protein | - |
| L5Z03_RS24705 (L5Z03_24665) | 17789..18178 | - | 390 | WP_159316710.1 | hypothetical protein | - |
| L5Z03_RS24710 (L5Z03_24670) | 18175..18696 | - | 522 | WP_000598516.1 | hypothetical protein | - |
| L5Z03_RS24715 (L5Z03_24675) | 18689..19525 | - | 837 | WP_042634275.1 | hypothetical protein | - |
| L5Z03_RS24720 (L5Z03_24680) | 19522..20469 | - | 948 | WP_046788422.1 | metallophosphoesterase | - |
| L5Z03_RS24725 (L5Z03_24685) | 20833..21870 | + | 1038 | WP_000818955.1 | plasmid segregation protein ParM | - |
| L5Z03_RS24730 (L5Z03_24690) | 21882..22520 | + | 639 | WP_159316711.1 | hypothetical protein | - |
| L5Z03_RS24735 (L5Z03_24695) | 22924..23376 | + | 453 | WP_000952689.1 | H transfer determinant A | - |
| L5Z03_RS24740 (L5Z03_24700) | 23366..23791 | + | 426 | WP_000836980.1 | hypothetical protein | - |
| L5Z03_RS24745 (L5Z03_24705) | 23800..24354 | + | 555 | WP_000235777.1 | hypothetical protein | - |
| L5Z03_RS24750 (L5Z03_24710) | 24474..28778 | + | 4305 | WP_001232107.1 | IncHI-type conjugal transfer protein RSP | - |
| L5Z03_RS24755 (L5Z03_24715) | 29056..29568 | + | 513 | WP_001286759.1 | IncHI-type conjugal transfer protein TrhF | - |
| L5Z03_RS24760 (L5Z03_24720) | 29555..31066 | + | 1512 | WP_001256133.1 | TrbC family F-type conjugative pilus assembly protein | - |
| L5Z03_RS24765 (L5Z03_24725) | 31211..32266 | + | 1056 | WP_181196458.1 | IncHI-type conjugal transfer protein TrhU | - |
| L5Z03_RS24770 (L5Z03_24730) | 32285..35473 | + | 3189 | WP_000776705.1 | IncHI-type conjugal transfer protein TrhN | - |
| L5Z03_RS24775 (L5Z03_24735) | 35502..36374 | - | 873 | WP_000771832.1 | hypothetical protein | - |
| L5Z03_RS24780 (L5Z03_24740) | 36554..38338 | + | 1785 | WP_042634277.1 | IncHI-type conjugal transfer helicase TrhI | - |
| L5Z03_RS24785 (L5Z03_24745) | 38733..39605 | + | 873 | WP_000041927.1 | hypothetical protein | - |
| L5Z03_RS24790 (L5Z03_24750) | 39663..40040 | + | 378 | WP_000120822.1 | hypothetical protein | - |
| L5Z03_RS24795 (L5Z03_24755) | 40101..41078 | + | 978 | WP_042634278.1 | hypothetical protein | - |
| L5Z03_RS24800 (L5Z03_24760) | 41136..42194 | + | 1059 | WP_000063335.1 | AAA family ATPase | - |
| L5Z03_RS24805 (L5Z03_24765) | 42326..42499 | + | 174 | WP_001176647.1 | hypothetical protein | - |
| L5Z03_RS24810 (L5Z03_24770) | 42563..43690 | + | 1128 | WP_000174395.1 | DUF3150 domain-containing protein | - |
| L5Z03_RS24815 (L5Z03_24775) | 43768..45780 | + | 2013 | WP_046788423.1 | VWA domain-containing protein | - |
| L5Z03_RS24820 (L5Z03_24780) | 45852..46073 | + | 222 | WP_042634307.1 | hypothetical protein | - |
| L5Z03_RS24825 (L5Z03_24785) | 46187..47419 | + | 1233 | WP_000220381.1 | toprim domain-containing protein | - |
| L5Z03_RS24830 (L5Z03_24790) | 47690..48211 | + | 522 | WP_001010933.1 | hypothetical protein | - |
| L5Z03_RS24835 (L5Z03_24795) | 48290..49168 | + | 879 | WP_000762004.1 | hypothetical protein | - |
| L5Z03_RS24840 (L5Z03_24800) | 49239..50174 | + | 936 | WP_000691118.1 | hypothetical protein | - |
| L5Z03_RS24845 (L5Z03_24805) | 50243..51163 | + | 921 | WP_000991699.1 | hypothetical protein | - |
| L5Z03_RS24850 (L5Z03_24810) | 51230..52168 | + | 939 | WP_000472043.1 | hypothetical protein | - |
| L5Z03_RS24855 (L5Z03_24815) | 52340..53296 | + | 957 | WP_046788424.1 | hypothetical protein | - |
| L5Z03_RS24860 (L5Z03_24820) | 53560..53835 | + | 276 | WP_001004201.1 | hypothetical protein | - |
| L5Z03_RS24865 (L5Z03_24825) | 53880..54470 | + | 591 | WP_000578892.1 | hypothetical protein | - |
| L5Z03_RS24870 (L5Z03_24830) | 54478..54735 | + | 258 | WP_001371933.1 | hypothetical protein | - |
| L5Z03_RS24875 (L5Z03_24835) | 54809..55345 | + | 537 | WP_000107168.1 | hypothetical protein | - |
| L5Z03_RS24880 (L5Z03_24840) | 55362..55808 | + | 447 | WP_000549069.1 | hypothetical protein | - |
| L5Z03_RS24885 (L5Z03_24845) | 55899..56861 | + | 963 | WP_000119427.1 | DNA replication terminus site-binding protein | - |
| L5Z03_RS24890 (L5Z03_24850) | 56871..57746 | + | 876 | WP_063625258.1 | hypothetical protein | - |
| L5Z03_RS24895 (L5Z03_24855) | 57776..58081 | + | 306 | Protein_51 | IS30 family transposase ISApl1 | Transposase |
| L5Z03_RS24900 (L5Z03_24860) | 58167..59141 | + | 975 | WP_012478345.1 | IS30 family transposase ISApl1 | Transposase |
| L5Z03_RS24905 (L5Z03_24865) | 59337..60962 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| L5Z03_RS24910 (L5Z03_24870) | 61034..61756 | + | 723 | WP_039003037.1 | PAP2 family protein | - |
| L5Z03_RS24915 (L5Z03_24875) | 61782..62126 | + | 345 | WP_001805195.1 | hypothetical protein | - |
| L5Z03_RS24920 (L5Z03_24880) | 62148..63323 | - | 1176 | WP_000795947.1 | tyrosine-type recombinase/integrase | - |
| L5Z03_RS24925 (L5Z03_24885) | 63494..63706 | + | 213 | WP_001285422.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| L5Z03_RS24930 (L5Z03_24890) | 64067..65149 | + | 1083 | WP_001232449.1 | hypothetical protein | - |
| L5Z03_RS24935 (L5Z03_24895) | 65316..66815 | - | 1500 | WP_001284313.1 | lipopolysaccharide kinase InaA family protein | - |
| L5Z03_RS24940 (L5Z03_24900) | 66841..68478 | - | 1638 | WP_000081622.1 | PP2C family serine/threonine-protein phosphatase | - |
| L5Z03_RS24945 (L5Z03_24905) | 68478..69518 | - | 1041 | WP_001253653.1 | TerY-C metal binding domain-containing protein | - |
| L5Z03_RS24950 (L5Z03_24910) | 69604..70242 | - | 639 | WP_001253658.1 | VWA domain-containing protein | - |
| L5Z03_RS24955 (L5Z03_24915) | 70242..70883 | - | 642 | WP_000116681.1 | TerD family protein | - |
| L5Z03_RS24960 (L5Z03_24920) | 70906..71544 | - | 639 | WP_001388628.1 | VWA domain-containing protein | - |
| L5Z03_RS24965 (L5Z03_24925) | 72007..72474 | - | 468 | WP_001176767.1 | tellurium resistance protein TerW | - |
| L5Z03_RS24970 (L5Z03_24930) | 72492..73700 | - | 1209 | WP_000506887.1 | DUF4236 domain-containing protein | - |
| L5Z03_RS24975 (L5Z03_24935) | 73711..74667 | - | 957 | WP_000797366.1 | HpcH/HpaI aldolase/citrate lyase family protein | - |
| L5Z03_RS24980 (L5Z03_24940) | 74667..75746 | - | 1080 | WP_042634304.1 | cysteine protease StiP family protein | - |
| L5Z03_RS24985 (L5Z03_24945) | 75748..76521 | - | 774 | WP_001040059.1 | hypothetical protein | - |
| L5Z03_RS24990 (L5Z03_24950) | 76514..77656 | - | 1143 | WP_001285478.1 | phosphoribosyltransferase domain-containing protein | - |
| L5Z03_RS24995 (L5Z03_24955) | 77666..78724 | - | 1059 | WP_001035162.1 | ATP-grasp domain-containing protein | - |
| L5Z03_RS25000 (L5Z03_24960) | 79048..79629 | + | 582 | WP_042634303.1 | TerD family protein | - |
| L5Z03_RS25005 (L5Z03_24965) | 79629..80786 | + | 1158 | WP_001054787.1 | TerD family protein | - |
| L5Z03_RS25010 (L5Z03_24970) | 80809..81264 | + | 456 | WP_000007448.1 | tellurite resistance TerB family protein | - |
| L5Z03_RS25015 (L5Z03_24975) | 81287..82327 | + | 1041 | WP_000255079.1 | tellurium resistance membrane protein TerC | - |
| L5Z03_RS25020 (L5Z03_24980) | 82376..82954 | + | 579 | WP_000116677.1 | tellurium resistance membrane protein TerD | - |
| L5Z03_RS25025 (L5Z03_24985) | 83022..83597 | + | 576 | WP_000301242.1 | TerD family protein | - |
| L5Z03_RS25030 (L5Z03_24990) | 84026..85267 | + | 1242 | WP_001053338.1 | VWA domain-containing protein | - |
| L5Z03_RS25035 | 85358..85489 | + | 132 | WP_000374059.1 | hypothetical protein | - |
| L5Z03_RS25040 (L5Z03_24995) | 85830..86111 | - | 282 | WP_000077926.1 | hypothetical protein | - |
| L5Z03_RS25045 (L5Z03_25000) | 86161..86352 | - | 192 | WP_000398480.1 | hypothetical protein | - |
| L5Z03_RS25050 (L5Z03_25005) | 86444..86785 | - | 342 | WP_001151575.1 | hypothetical protein | - |
| L5Z03_RS25055 (L5Z03_25010) | 87158..87550 | + | 393 | WP_000341066.1 | hypothetical protein | - |
| L5Z03_RS25060 (L5Z03_25015) | 88154..88447 | + | 294 | WP_024136327.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| L5Z03_RS25065 (L5Z03_25020) | 88452..89777 | + | 1326 | WP_000088046.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| L5Z03_RS25070 (L5Z03_25025) | 89838..90044 | + | 207 | WP_000134171.1 | hypothetical protein | - |
| L5Z03_RS25075 (L5Z03_25030) | 90146..90556 | + | 411 | WP_000985911.1 | hypothetical protein | - |
| L5Z03_RS25080 (L5Z03_25035) | 90569..91384 | + | 816 | WP_001572439.1 | HNH endonuclease signature motif containing protein | - |
| L5Z03_RS25085 (L5Z03_25040) | 91638..92063 | + | 426 | WP_001043843.1 | hypothetical protein | - |
| L5Z03_RS25090 (L5Z03_25045) | 92517..92753 | + | 237 | Protein_90 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| L5Z03_RS25095 (L5Z03_25050) | 92808..93107 | + | 300 | WP_001572440.1 | hypothetical protein | - |
| L5Z03_RS25100 (L5Z03_25055) | 93420..95459 | - | 2040 | WP_032192809.1 | ATP-dependent helicase | - |
| L5Z03_RS25105 (L5Z03_25060) | 95456..96442 | - | 987 | WP_001572342.1 | hypothetical protein | - |
| L5Z03_RS25110 (L5Z03_25065) | 97073..97411 | + | 339 | WP_223231361.1 | HNH endonuclease signature motif containing protein | - |
| L5Z03_RS25115 (L5Z03_25070) | 97473..97676 | + | 204 | WP_001194555.1 | hypothetical protein | - |
| L5Z03_RS25120 (L5Z03_25075) | 98018..98422 | - | 405 | WP_001287392.1 | H-NS family nucleoid-associated regulatory protein | - |
| L5Z03_RS25125 (L5Z03_25080) | 98920..99156 | - | 237 | WP_000175476.1 | hypothetical protein | - |
| L5Z03_RS25130 (L5Z03_25085) | 99198..99653 | - | 456 | WP_001572344.1 | hypothetical protein | - |
| L5Z03_RS25135 (L5Z03_25090) | 99713..100378 | - | 666 | WP_000490638.1 | hypothetical protein | - |
| L5Z03_RS25140 (L5Z03_25095) | 100436..100816 | - | 381 | WP_001426317.1 | hypothetical protein | - |
| L5Z03_RS25145 (L5Z03_25100) | 101459..102277 | + | 819 | WP_000193209.1 | DUF4942 domain-containing protein | - |
| L5Z03_RS25150 (L5Z03_25105) | 102274..103479 | + | 1206 | WP_001572381.1 | hypothetical protein | - |
| L5Z03_RS25155 (L5Z03_25110) | 103759..105078 | - | 1320 | WP_000078514.1 | DUF1173 family protein | - |
| L5Z03_RS25160 (L5Z03_25115) | 105101..105268 | - | 168 | WP_000220758.1 | hypothetical protein | - |
| L5Z03_RS25165 (L5Z03_25120) | 105329..106756 | - | 1428 | WP_000833382.1 | DNA cytosine methyltransferase | - |
| L5Z03_RS25170 (L5Z03_25125) | 106971..107486 | + | 516 | WP_001572389.1 | thermonuclease family protein | - |
| L5Z03_RS25175 (L5Z03_25130) | 107489..108385 | + | 897 | WP_000975182.1 | hypothetical protein | - |
| L5Z03_RS25180 (L5Z03_25135) | 108433..108840 | + | 408 | WP_001572392.1 | hypothetical protein | - |
| L5Z03_RS25185 (L5Z03_25140) | 109535..109732 | + | 198 | WP_000710701.1 | hypothetical protein | - |
| L5Z03_RS25190 (L5Z03_25145) | 110069..110530 | + | 462 | WP_000185304.1 | hypothetical protein | - |
| L5Z03_RS25195 (L5Z03_25150) | 110560..110967 | + | 408 | WP_000074418.1 | hypothetical protein | - |
| L5Z03_RS25200 (L5Z03_25155) | 111018..111545 | - | 528 | WP_001027750.1 | hypothetical protein | - |
| L5Z03_RS25205 (L5Z03_25160) | 111712..112098 | - | 387 | WP_181728339.1 | hypothetical protein | - |
| L5Z03_RS25210 (L5Z03_25165) | 112172..113686 | - | 1515 | Protein_114 | Tn3-like element TnAs1 family transposase | - |
| L5Z03_RS25215 (L5Z03_25170) | 113752..114456 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| L5Z03_RS25220 (L5Z03_25175) | 114574..114777 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| L5Z03_RS25225 (L5Z03_25180) | 114905..115744 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| L5Z03_RS25230 (L5Z03_25185) | 115738..116085 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| L5Z03_RS25235 (L5Z03_25190) | 116308..116760 | - | 453 | WP_001749986.1 | hypothetical protein | ARG |
| L5Z03_RS25240 (L5Z03_25195) | 116845..117477 | - | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| L5Z03_RS25245 (L5Z03_25200) | 117615..118445 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| L5Z03_RS25250 (L5Z03_25205) | 118576..119130 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| L5Z03_RS25255 (L5Z03_25210) | 119274..119978 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| L5Z03_RS25260 (L5Z03_25215) | 120092..120868 | + | 777 | WP_001199192.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| L5Z03_RS25265 (L5Z03_25220) | 121097..122122 | + | 1026 | WP_000742814.1 | Hygromycin-B 4-O-kinase | ARG |
| L5Z03_RS25270 (L5Z03_25225) | 122197..122436 | + | 240 | Protein_126 | AAC(3) family N-acetyltransferase | - |
| L5Z03_RS25275 (L5Z03_25230) | 122544..123296 | - | 753 | WP_000602738.1 | IS6 family transposase ISRle7 | Transposase |
| L5Z03_RS25280 (L5Z03_25235) | 123358..124881 | + | 1524 | Protein_128 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| L5Z03_RS25285 (L5Z03_25240) | 124941..125069 | + | 129 | WP_032073144.1 | hypothetical protein | - |
| L5Z03_RS25290 (L5Z03_25245) | 125107..125592 | + | 486 | WP_006581703.1 | hypothetical protein | - |
| L5Z03_RS25300 (L5Z03_25255) | 126969..127784 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| L5Z03_RS25305 (L5Z03_25260) | 127871..128113 | + | 243 | Protein_133 | phosphoglucosamine mutase | - |
| L5Z03_RS25310 (L5Z03_25265) | 128316..129020 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| L5Z03_RS25315 (L5Z03_25270) | 129074..129364 | + | 291 | Protein_135 | CmlA/FloR family chloramphenicol efflux MFS transporter | - |
| L5Z03_RS25320 (L5Z03_25275) | 129392..129697 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| L5Z03_RS25325 (L5Z03_25280) | 129809..131302 | + | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| L5Z03_RS25330 (L5Z03_25285) | 131459..132163 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| L5Z03_RS25335 (L5Z03_25290) | 132572..133276 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| L5Z03_RS25340 (L5Z03_25295) | 134909..135997 | - | 1089 | WP_000159529.1 | IncHI-type plasmid replication initiator protein RepHI2 | - |
| L5Z03_RS25345 (L5Z03_25300) | 137105..139561 | - | 2457 | WP_001572417.1 | Ig-like domain-containing protein | - |
| L5Z03_RS25350 (L5Z03_25305) | 139934..140560 | + | 627 | WP_000966519.1 | hypothetical protein | - |
| L5Z03_RS25355 (L5Z03_25310) | 140618..140899 | - | 282 | WP_000535422.1 | hypothetical protein | - |
| L5Z03_RS25360 (L5Z03_25315) | 140880..141329 | - | 450 | WP_094875903.1 | hypothetical protein | - |
| L5Z03_RS25365 (L5Z03_25320) | 141390..141566 | - | 177 | WP_000070863.1 | hypothetical protein | - |
| L5Z03_RS25370 (L5Z03_25325) | 141563..143254 | - | 1692 | WP_042634269.1 | DUF4942 domain-containing protein | - |
| L5Z03_RS25375 (L5Z03_25330) | 143502..144665 | - | 1164 | WP_000114859.1 | hypothetical protein | - |
| L5Z03_RS25380 (L5Z03_25335) | 145035..145847 | + | 813 | WP_001121575.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| L5Z03_RS25385 (L5Z03_25340) | 145856..146689 | - | 834 | WP_001426339.1 | hypothetical protein | - |
| L5Z03_RS25390 (L5Z03_25345) | 146945..147661 | - | 717 | WP_046788421.1 | zinc finger-like domain-containing protein | - |
| L5Z03_RS25395 (L5Z03_25350) | 147658..147858 | - | 201 | WP_000594931.1 | hypothetical protein | - |
| L5Z03_RS25400 (L5Z03_25355) | 147876..148931 | - | 1056 | WP_001065779.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|