MGE detailed information
MGE type: Prophage MGE length: 82375 bp
Accession: NZ_CP091540 Location: 2082764..2165138 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S46L1 Replicon: chromosome
Accession: NZ_CP091540 Location: 2082764..2165138 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S46L1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5Z03_RS10175 (2077820) | 2077820..2078272 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| L5Z03_RS10180 (2078302) | 2078302..2079042 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| L5Z03_RS10185 (2079079) | 2079079..2079600 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| L5Z03_RS10190 (2079602) | 2079602..2080201 | - | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| L5Z03_RS10195 (2080828) | 2080828..2081724 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| L5Z03_RS10200 (2082144) | 2082144..2082755 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| L5Z03_RS10205 (2082764) | 2082764..2083774 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| L5Z03_RS10210 (2083853) | 2083853..2084638 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| L5Z03_RS10215 (2084635) | 2084635..2085390 | - | 756 | WP_000203014.1 | hypothetical protein | VF |
| L5Z03_RS10220 (2085469) | 2085469..2086413 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| L5Z03_RS10225 (2086429) | 2086429..2087748 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| L5Z03_RS10230 (2087865) | 2087865..2088836 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| L5Z03_RS10235 (2088909) | 2088909..2090351 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| L5Z03_RS10240 (2090475) | 2090475..2091344 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| L5Z03_RS10245 (2091686) | 2091686..2093161 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| L5Z03_RS10250 (2093396) | 2093396..2095207 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| L5Z03_RS10255 (2095245) | 2095245..2095886 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| L5Z03_RS10260 (2095986) | 2095986..2097164 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| L5Z03_RS10265 (2097295) | 2097295..2097585 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| L5Z03_RS10270 (2097653) | 2097653..2098006 | + | 354 | WP_001042119.1 | protein YebF | - |
| L5Z03_RS10275 (2098100) | 2098100..2098759 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| L5Z03_RS10280 (2098972) | 2098972..2101023 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| L5Z03_RS10285 (2101058) | 2101058..2101756 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| L5Z03_RS10290 (2101780) | 2101780..2102436 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| L5Z03_RS10295 (2102544) | 2102544..2102774 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| L5Z03_RS10300 (2102912) | 2102912..2103286 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| L5Z03_RS10305 (2103287) | 2103287..2104162 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| L5Z03_RS10310 (2104179) | 2104179..2104532 | + | 354 | WP_000722368.1 | YebY family protein | - |
| L5Z03_RS10315 (2104906) | 2104906..2105982 | - | 1077 | WP_001189085.1 | hypothetical protein ; Integrase | Integrase |
| L5Z03_RS10320 (2105948) | 2105948..2106229 | - | 282 | WP_023234152.1 | excisionase | - |
| - (2106342) | 2106342..2106518 | + | 177 | NuclAT_0 | - | Antitoxin Detail |
| - (2106342) | 2106342..2106518 | + | 177 | NuclAT_0 | - | Antitoxin Detail |
| - (2106342) | 2106342..2106518 | + | 177 | NuclAT_0 | - | Antitoxin Detail |
| - (2106342) | 2106342..2106518 | + | 177 | NuclAT_0 | - | Antitoxin Detail |
| L5Z03_RS10325 (2106336) | 2106336..2106524 | - | 189 | WP_052929118.1 | DUF1187 family protein | - |
| L5Z03_RS10330 (2106517) | 2106517..2106711 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| L5Z03_RS10335 (2106768) | 2106768..2107577 | - | 810 | WP_052929117.1 | recombination protein RecT | - |
| L5Z03_RS10340 (2107570) | 2107570..2110245 | - | 2676 | WP_052929116.1 | exodeoxyribonuclease VIII | - |
| L5Z03_RS10345 (2110346) | 2110346..2110621 | - | 276 | WP_080312066.1 | hypothetical protein | - |
| L5Z03_RS10350 (2110696) | 2110696..2110866 | - | 171 | WP_001359121.1 | YdaE family protein | - |
| L5Z03_RS10355 (2110866) | 2110866..2111087 | - | 222 | WP_000560226.1 | killing protein KilR | - |
| L5Z03_RS10360 (2111833) | 2111833..2111958 | - | 126 | Protein_2028 | hypothetical protein | - |
| L5Z03_RS10365 (2111960) | 2111960..2112115 | - | 156 | WP_072129297.1 | DUF1391 family protein | - |
| L5Z03_RS10370 (2112421) | 2112421..2112840 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| L5Z03_RS10375 (2112937) | 2112937..2113179 | + | 243 | WP_001033914.1 | helix-turn-helix transcriptional regulator | - |
| L5Z03_RS10380 (2113176) | 2113176..2113598 | + | 423 | WP_000702025.1 | toxin YdaT family protein | - |
| L5Z03_RS10385 (2113676) | 2113676..2114464 | + | 789 | WP_001737256.1 | hypothetical protein | - |
| L5Z03_RS10390 (2114471) | 2114471..2115217 | + | 747 | WP_052929112.1 | ATP-binding protein | - |
| L5Z03_RS10395 (2115240) | 2115240..2116001 | + | 762 | WP_139707682.1 | DUF1627 domain-containing protein | - |
| L5Z03_RS10400 (2116017) | 2116017..2116439 | + | 423 | WP_050306692.1 | DUF977 family protein | - |
| L5Z03_RS10405 (2116436) | 2116436..2116636 | + | 201 | WP_042973267.1 | hypothetical protein | - |
| L5Z03_RS10410 (2116910) | 2116910..2117488 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| L5Z03_RS10415 (2117448) | 2117448..2118545 | - | 1098 | WP_042973270.1 | beta family protein | - |
| L5Z03_RS10420 (2119103) | 2119103..2119258 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| L5Z03_RS10425 (2119534) | 2119534..2119746 | + | 213 | WP_052929182.1 | hypothetical protein | - |
| L5Z03_RS10430 (2119818) | 2119818..2120417 | + | 600 | WP_052929183.1 | DUF1367 family protein | - |
| L5Z03_RS10435 (2120417) | 2120417..2120707 | + | 291 | WP_001533370.1 | DUF1364 domain-containing protein | - |
| L5Z03_RS10440 (2120704) | 2120704..2121246 | + | 543 | WP_000640144.1 | DUF1133 family protein | - |
| L5Z03_RS10445 (2121730) | 2121730..2122065 | + | 336 | WP_001533367.1 | phage holin, lambda family | - |
| L5Z03_RS10450 (2122069) | 2122069..2122545 | + | 477 | WP_001194114.1 | glycoside hydrolase family protein | - |
| L5Z03_RS10455 (2122529) | 2122529..2122921 | + | 393 | WP_042043867.1 | DUF2570 domain-containing protein | - |
| L5Z03_RS10460 (2122806) | 2122806..2123084 | + | 279 | WP_173671027.1 | hypothetical protein | - |
| L5Z03_RS10465 (2123065) | 2123065..2123250 | + | 186 | WP_000113285.1 | hypothetical protein | - |
| L5Z03_RS10470 (2123383) | 2123383..2123931 | - | 549 | WP_000762846.1 | hypothetical protein | - |
| L5Z03_RS10475 (2123951) | 2123951..2124502 | + | 552 | WP_001218996.1 | terminase small subunit | - |
| L5Z03_RS10480 (2124505) | 2124505..2126127 | + | 1623 | WP_001130793.1 | hypothetical protein | - |
| L5Z03_RS10485 (2126127) | 2126127..2127593 | + | 1467 | WP_080312063.1 | DUF1073 domain-containing protein | - |
| L5Z03_RS10490 (2127484) | 2127484..2128218 | + | 735 | WP_139707720.1 | phage minor head protein | - |
| L5Z03_RS10495 (2128233) | 2128233..2129453 | + | 1221 | WP_000873186.1 | DUF2213 domain-containing protein | - |
| L5Z03_RS10500 (2129457) | 2129457..2129963 | + | 507 | WP_080312062.1 | hypothetical protein | - |
| L5Z03_RS10505 (2129975) | 2129975..2130916 | + | 942 | WP_094324017.1 | DUF2184 domain-containing protein | - |
| L5Z03_RS10510 (2130913) | 2130913..2131146 | - | 234 | Protein_2058 | hypothetical protein | - |
| L5Z03_RS10515 (2131145) | 2131145..2131552 | + | 408 | WP_032197767.1 | DUF4054 domain-containing protein | - |
| L5Z03_RS10520 (2131549) | 2131549..2132103 | + | 555 | WP_080312060.1 | hypothetical protein | - |
| L5Z03_RS10525 (2132090) | 2132090..2132479 | + | 390 | WP_001142480.1 | hypothetical protein | - |
| L5Z03_RS10530 (2132454) | 2132454..2133017 | + | 564 | WP_033544654.1 | hypothetical protein | - |
| L5Z03_RS10535 (2133021) | 2133021..2134166 | + | 1146 | WP_080312059.1 | DUF3383 family protein | - |
| L5Z03_RS10540 (2134177) | 2134177..2134617 | + | 441 | WP_080312058.1 | DUF3277 family protein | - |
| L5Z03_RS10545 (2134621) | 2134621..2135073 | + | 453 | WP_000393960.1 | hypothetical protein | - |
| L5Z03_RS10550 (2135085) | 2135085..2135261 | + | 177 | WP_023141050.1 | hypothetical protein | - |
| L5Z03_RS10555 (2135251) | 2135251..2137239 | + | 1989 | WP_080312057.1 | lytic transglycosylase | - |
| L5Z03_RS10560 (2137239) | 2137239..2137826 | + | 588 | WP_001298404.1 | hypothetical protein | - |
| L5Z03_RS10565 (2137826) | 2137826..2138128 | + | 303 | WP_000155119.1 | hypothetical protein | - |
| L5Z03_RS10570 (2138131) | 2138131..2139195 | + | 1065 | WP_080312056.1 | hypothetical protein | - |
| L5Z03_RS10575 (2139198) | 2139198..2139659 | + | 462 | WP_052929233.1 | hypothetical protein | - |
| L5Z03_RS10580 (2139833) | 2139833..2140603 | + | 771 | WP_052929232.1 | hypothetical protein | - |
| L5Z03_RS10585 (2140590) | 2140590..2140985 | + | 396 | WP_059111263.1 | hypothetical protein | - |
| L5Z03_RS10590 (2141051) | 2141051..2141803 | + | 753 | WP_032286952.1 | Gp138 family membrane-puncturing spike protein | - |
| L5Z03_RS10595 (2141803) | 2141803..2142156 | + | 354 | WP_001270632.1 | hypothetical protein | - |
| L5Z03_RS10600 (2142156) | 2142156..2143355 | + | 1200 | WP_001197075.1 | baseplate J/gp47 family protein | - |
| L5Z03_RS10605 (2143352) | 2143352..2144032 | + | 681 | WP_000049950.1 | DUF2612 domain-containing protein | - |
| L5Z03_RS10610 (2144032) | 2144032..2144727 | + | 696 | WP_180856065.1 | hypothetical protein | - |
| L5Z03_RS10615 (2144730) | 2144730..2145170 | + | 441 | WP_006673257.1 | tail fiber assembly protein | - |
| L5Z03_RS10620 (2145142) | 2145142..2145744 | - | 603 | WP_006673255.1 | tail fiber assembly protein | - |
| L5Z03_RS10625 (2145744) | 2145744..2146295 | - | 552 | WP_235688548.1 | phage tail protein | - |
| L5Z03_RS10630 (2146322) | 2146322..2146876 | + | 555 | WP_080312093.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| L5Z03_RS10635 (2147337) | 2147337..2148260 | - | 924 | Protein_2083 | Holliday junction ATP-dependent DNA helicase RuvB ; Integrase | Integrase |
| L5Z03_RS10640 (2148524) | 2148524..2148985 | - | 462 | Protein_2084 | DNA breaking-rejoining protein | - |
| L5Z03_RS10645 (2148974) | 2148974..2149165 | + | 192 | Protein_2085 | glycoside hydrolase family 19 protein | - |
| L5Z03_RS10650 (2149219) | 2149219..2149752 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| L5Z03_RS10655 (2150009) | 2150009..2150176 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| L5Z03_RS10660 (2150241) | 2150241..2150429 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| L5Z03_RS10665 (2150484) | 2150484..2150744 | + | 261 | Protein_2089 | DUF1441 family protein | - |
| L5Z03_RS10670 (2150959) | 2150959..2151303 | + | 345 | Protein_2090 | macro domain-containing protein | - |
| L5Z03_RS10675 (2151313) | 2151313..2151783 | + | 471 | Protein_2091 | tail fiber assembly protein | - |
| L5Z03_RS10680 (2151880) | 2151880..2152080 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| L5Z03_RS10685 (2152470) | 2152470..2152650 | - | 181 | Protein_2093 | IS3 family transposase | - |
| L5Z03_RS10690 (2152650) | 2152650..2152775 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| L5Z03_RS10695 (2153289) | 2153289..2153435 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| L5Z03_RS10700 (2153429) | 2153429..2153596 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| L5Z03_RS10705 (2153923) | 2153923..2154537 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| L5Z03_RS10710 (2154547) | 2154547..2154705 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| L5Z03_RS10715 (2154838) | 2154838..2155752 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| L5Z03_RS10720 (2157065) | 2157065..2157487 | - | 423 | Protein_2100 | Phosphogluconate dehydratase ; Integrase | Integrase |
| L5Z03_RS10725 (2157557) | 2157557..2158751 | + | 1195 | Protein_2101 | IS256 family transposase IS285 | Transposase |
| L5Z03_RS10730 (2158897) | 2158897..2159037 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| L5Z03_RS10735 (2159203) | 2159203..2159472 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| L5Z03_RS10740 (2159842) | 2159842..2160261 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| L5Z03_RS10745 (2160649) | 2160649..2161125 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| L5Z03_RS10750 (2161455) | 2161455..2161850 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| L5Z03_RS10755 (2162533) | 2162533..2163255 | + | 723 | WP_000182072.1 | Inner membrane protein YebE | VF |
| L5Z03_RS10760 (2163540) | 2163540..2163704 | + | 165 | WP_001134856.1 | membrane protein | - |
| L5Z03_RS10765 (2163928) | 2163928..2164578 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| L5Z03_RS10770 (2164597) | 2164597..2164788 | - | 192 | WP_000457836.1 | YebW family protein | - |
| L5Z03_RS10775 (2164899) | 2164899..2165135 | - | 237 | WP_024131108.1 | YebV family protein | - |
| L5Z03_RS10780 (2165253) | 2165253..2166692 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| L5Z03_RS10785 (2166770) | 2166770..2169403 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|