MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 43441 bp
Accession: NZ_CP091534 Location: 864254..907694 Organism: Escherichia coli strain 537-20 Replicon: chromosome
Accession: NZ_CP091534 Location: 864254..907694 Organism: Escherichia coli strain 537-20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6D13_RS04145 (859421) | 859421..859876 | + | 456 | WP_000287130.1 | type II secretion system major pseudopilin GspG | - |
| L6D13_RS04150 (859880) | 859880..860443 | + | 564 | WP_001115154.1 | type II secretion system minor pseudopilin GspH | - |
| L6D13_RS04155 (860440) | 860440..860811 | + | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| L6D13_RS04160 (860808) | 860808..861407 | + | 600 | WP_001255040.1 | type II secretion system minor pseudopilin GspJ | - |
| L6D13_RS04165 (861410) | 861410..862387 | + | 978 | WP_096934255.1 | type II secretion system minor pseudopilin GspK | - |
| L6D13_RS04170 (862384) | 862384..863562 | + | 1179 | WP_000094970.1 | type II secretion system protein GspL | - |
| L6D13_RS04175 (863564) | 863564..864100 | + | 537 | WP_000942786.1 | GspM family type II secretion system protein YghD | - |
| L6D13_RS04180 (864381) | 864381..865223 | - | 843 | WP_032152755.1 | DUF4942 domain-containing protein | - |
| L6D13_RS04185 (865308) | 865308..865505 | - | 198 | WP_032152719.1 | DUF957 domain-containing protein | - |
| L6D13_RS04190 (865517) | 865517..866005 | - | 489 | WP_001774608.1 | DUF5983 family protein | - |
| L6D13_RS04195 (866002) | 866002..866379 | - | 378 | WP_001774607.1 | TA system toxin CbtA family protein | Toxin Detail |
| L6D13_RS04200 (866469) | 866469..866837 | - | 369 | WP_001774606.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| L6D13_RS04205 (866887) | 866887..867531 | - | 645 | WP_001774605.1 | hypothetical protein | - |
| L6D13_RS04210 (867550) | 867550..867771 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| L6D13_RS04215 (867834) | 867834..868310 | - | 477 | WP_001297237.1 | RadC family protein | - |
| L6D13_RS04220 (868326) | 868326..868805 | - | 480 | WP_032152717.1 | antirestriction protein | - |
| L6D13_RS04225 (869144) | 869144..869962 | - | 819 | WP_016238867.1 | DUF932 domain-containing protein | - |
| L6D13_RS04230 (870061) | 870061..870294 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| L6D13_RS04235 (870300) | 870300..870977 | - | 678 | WP_001097305.1 | hypothetical protein | - |
| L6D13_RS04240 (871125) | 871125..871805 | - | 681 | WP_032082725.1 | WYL domain-containing protein | - |
| L6D13_RS04245 (872008) | 872008..872892 | - | 885 | WP_001116802.1 | YfjP family GTPase | - |
| L6D13_RS04250 (872993) | 872993..874212 | + | 1220 | Protein_834 | hypothetical protein | - |
| L6D13_RS04255 (875376) | 875376..875906 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| L6D13_RS04260 (876576) | 876576..877307 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| L6D13_RS04265 (877634) | 877634..879238 | + | 1605 | WP_236932541.1 | YfjI family protein | - |
| L6D13_RS04270 (880778) | 880778..881344 | + | 567 | WP_016238927.1 | inovirus-type Gp2 protein | - |
| L6D13_RS04275 (881592) | 881592..882167 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| L6D13_RS04280 (882236) | 882236..882472 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| L6D13_RS04285 (882469) | 882469..882627 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| L6D13_RS04290 (882715) | 882715..883263 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| L6D13_RS04295 (883282) | 883282..883626 | - | 345 | WP_000166952.1 | ProQ/FinO family protein | - |
| L6D13_RS04300 (883623) | 883623..883796 | - | 174 | WP_000258195.1 | hypothetical protein | - |
| L6D13_RS04305 (884259) | 884259..885344 | + | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| L6D13_RS04310 (885341) | 885341..886975 | + | 1635 | WP_236932542.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| L6D13_RS04315 (886965) | 886965..888965 | + | 2001 | WP_000905896.1 | DNA sulfur modification protein DndD | - |
| L6D13_RS04320 (888965) | 888965..889321 | + | 357 | WP_000937304.1 | DNA sulfur modification protein DndE | - |
| L6D13_RS04325 (889380) | 889380..890135 | - | 756 | WP_071992076.1 | DGQHR domain-containing protein | - |
| L6D13_RS04330 (890222) | 890222..890539 | - | 318 | WP_089069124.1 | DNA sulfur modification protein DndB | - |
| L6D13_RS04335 (890540) | 890540..891058 | - | 519 | WP_112044940.1 | accessory gene regulator B family protein | - |
| L6D13_RS04340 (891096) | 891096..896150 | - | 5055 | WP_000114120.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| L6D13_RS04345 (896131) | 896131..897456 | - | 1326 | WP_000283233.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| L6D13_RS04350 (897461) | 897461..899110 | - | 1650 | WP_001274542.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| L6D13_RS04355 (899334) | 899334..899499 | - | 166 | Protein_855 | integrase | - |
| L6D13_RS04360 (899723) | 899723..900463 | + | 741 | WP_001477155.1 | outer membrane beta-barrel protein | - |
| L6D13_RS04365 (900637) | 900637..902136 | + | 1500 | WP_001774678.1 | phosphoethanolamine transferase | - |
| L6D13_RS04370 (902245) | 902245..905760 | - | 3516 | WP_000344091.1 | AAA domain-containing protein | - |
| L6D13_RS04375 (906212) | 906212..907474 | - | 1263 | WP_001218810.1 | Prophage integrase IntA ; Integrase | Integrase |
| L6D13_RS04385 (907853) | 907853..908560 | - | 708 | WP_000234526.1 | DUF554 domain-containing protein | - |
| L6D13_RS04390 (908713) | 908713..908796 | + | 84 | WP_212591416.1 | hypothetical protein | - |
| L6D13_RS04395 (908958) | 908958..911093 | + | 2136 | WP_000839748.1 | ornithine decarboxylase | - |
| L6D13_RS04400 (911143) | 911143..912399 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|