MGE detailed information
MGE type: Genomic_island MGE length: 31885 bp
Accession: NZ_CP091534 Location: 1249504..1281388 Organism: Escherichia coli strain 537-20 Replicon: chromosome
Accession: NZ_CP091534 Location: 1249504..1281388 Organism: Escherichia coli strain 537-20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6D13_RS06050 (1244924) | 1244924..1246192 | - | 1269 | WP_096934273.1 | L-2-hydroxyglutarate oxidase | - |
| L6D13_RS06055 (1246212) | 1246212..1247189 | - | 978 | WP_001315804.1 | glutarate dioxygenase GlaH | - |
| L6D13_RS06060 (1247525) | 1247525..1249776 | - | 2252 | Protein_1189 | alpha-amylase family glycosyl hydrolase | - |
| L6D13_RS06070 (1251163) | 1251163..1252536 | + | 1374 | Protein_1190 | DUF5507 domain-containing protein | - |
| L6D13_RS24725 (1252922) | 1252922..1253110 | + | 189 | WP_072161517.1 | DNA invertase | - |
| L6D13_RS06080 (1253265) | 1253265..1253384 | + | 120 | WP_000927517.1 | hypothetical protein | - |
| L6D13_RS06085 (1253449) | 1253449..1256704 | + | 3256 | Protein_1193 | AIDA repeat-containing protein | - |
| L6D13_RS06090 (1257065) | 1257065..1257394 | - | 330 | WP_043491403.1 | TA system toxin CbtA family protein | Toxin Detail |
| L6D13_RS06095 (1257433) | 1257433..1257798 | - | 366 | WP_038416562.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| L6D13_RS06100 (1257824) | 1257824..1258045 | - | 222 | WP_038416561.1 | DUF987 family protein | - |
| L6D13_RS06105 (1258057) | 1258057..1258536 | - | 480 | WP_043491407.1 | DNA repair protein RadC | - |
| L6D13_RS06110 (1258547) | 1258547..1259014 | - | 468 | WP_038416558.1 | antirestriction protein | - |
| L6D13_RS06115 (1259111) | 1259111..1259365 | - | 255 | WP_071881512.1 | hypothetical protein | - |
| L6D13_RS06120 (1259365) | 1259365..1260186 | - | 822 | WP_172426760.1 | DUF932 domain-containing protein | - |
| L6D13_RS06125 (1260297) | 1260297..1260530 | - | 234 | WP_038416556.1 | DUF905 domain-containing protein | - |
| L6D13_RS06130 (1260604) | 1260604..1261434 | - | 831 | WP_230042021.1 | inhibitor of vertebrate lysozyme family protein | - |
| L6D13_RS06135 (1261608) | 1261608..1262018 | - | 411 | WP_038416555.1 | hypothetical protein | - |
| L6D13_RS06140 (1262163) | 1262163..1262378 | - | 216 | WP_038416553.1 | hypothetical protein | - |
| L6D13_RS06145 (1262390) | 1262390..1262539 | - | 150 | WP_001458941.1 | hypothetical protein | - |
| L6D13_RS06150 (1262541) | 1262541..1263248 | - | 708 | WP_038416551.1 | WYL domain-containing protein | - |
| L6D13_RS06155 (1263462) | 1263462..1264337 | - | 876 | WP_038416550.1 | GTPase family protein | - |
| L6D13_RS06160 (1264774) | 1264774..1266705 | + | 1932 | WP_038416549.1 | P-loop NTPase fold protein | - |
| L6D13_RS06165 (1266984) | 1266984..1267529 | + | 546 | WP_038416548.1 | hypothetical protein | - |
| L6D13_RS06170 (1267526) | 1267526..1268899 | + | 1374 | WP_038416547.1 | hypothetical protein | - |
| L6D13_RS06175 (1268896) | 1268896..1269687 | + | 792 | WP_038416546.1 | TatD family hydrolase | - |
| L6D13_RS06180 (1269824) | 1269824..1271800 | - | 1977 | WP_038416545.1 | UvrD-helicase domain-containing protein | - |
| L6D13_RS06185 (1271806) | 1271806..1273827 | - | 2022 | WP_038416544.1 | AAA family ATPase | - |
| L6D13_RS06190 (1274147) | 1274147..1276066 | - | 1920 | WP_130951943.1 | hypothetical protein | - |
| L6D13_RS06195 (1276091) | 1276091..1276294 | + | 204 | Protein_1215 | AlpA family phage regulatory protein | - |
| L6D13_RS06200 (1276343) | 1276343..1277851 | + | 1509 | WP_038416541.1 | DUF3987 domain-containing protein | - |
| L6D13_RS06205 (1278103) | 1278103..1278780 | + | 678 | WP_038416540.1 | inovirus Gp2 family protein | - |
| L6D13_RS06210 (1278868) | 1278868..1279341 | - | 474 | WP_032733613.1 | hypothetical protein | - |
| L6D13_RS06215 (1279542) | 1279542..1280783 | - | 1242 | WP_038416539.1 | Prophage integrase IntA ; Integrase | Integrase |
| L6D13_RS06225 (1281564) | 1281564..1282046 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| L6D13_RS06230 (1282217) | 1282217..1282654 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| L6D13_RS06235 (1282644) | 1282644..1282934 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| L6D13_RS06240 (1282996) | 1282996..1283337 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| L6D13_RS06245 (1283486) | 1283486..1285147 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| L6D13_RS06250 (1285233) | 1285233..1286111 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|