MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 95875 bp
Accession: NZ_CP091509 Location: 1887285..1983159 Organism: Neisseria dumasiana strain LMG 30012 Replicon: chromosome
Accession: NZ_CP091509 Location: 1887285..1983159 Organism: Neisseria dumasiana strain LMG 30012 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ88_RS08675 (LVJ88_08675) | 1882588..1883565 | - | 978 | WP_244694142.1 | IS30 family transposase | - |
| LVJ88_RS12570 | 1883562..1883693 | - | 132 | WP_269844505.1 | hypothetical protein | - |
| LVJ88_RS08690 (LVJ88_08690) | 1884346..1884936 | - | 591 | WP_085418471.1 | GTP cyclohydrolase II | - |
| LVJ88_RS08695 (LVJ88_08695) | 1884929..1885600 | - | 672 | WP_085418470.1 | hypothetical protein | - |
| LVJ88_RS08705 (LVJ88_08705) | 1886072..1887298 | + | 1227 | WP_085418475.1 | integrase arm-type DNA-binding domain-containing protein | - |
| LVJ88_RS08710 (LVJ88_08710) | 1887324..1888055 | + | 732 | WP_085418469.1 | hypothetical protein | - |
| LVJ88_RS08715 (LVJ88_08715) | 1888243..1888449 | + | 207 | WP_085418468.1 | AlpA family phage regulatory protein | - |
| LVJ88_RS08720 (LVJ88_08720) | 1888461..1888772 | + | 312 | WP_085418467.1 | helix-turn-helix domain-containing protein | - |
| LVJ88_RS08725 (LVJ88_08725) | 1888769..1889452 | + | 684 | WP_233127585.1 | KilA-N domain-containing protein | - |
| LVJ88_RS08730 (LVJ88_08730) | 1889491..1891809 | + | 2319 | WP_233127584.1 | hypothetical protein | - |
| LVJ88_RS08735 (LVJ88_08735) | 1891882..1892277 | + | 396 | WP_085418465.1 | hypothetical protein | - |
| LVJ88_RS08740 (LVJ88_08740) | 1892611..1892910 | + | 300 | WP_085418464.1 | hypothetical protein | - |
| LVJ88_RS08745 (LVJ88_08745) | 1893020..1894135 | + | 1116 | WP_085418463.1 | toprim domain-containing protein | - |
| LVJ88_RS08750 (LVJ88_08750) | 1894311..1895753 | + | 1443 | WP_233127583.1 | DUF927 domain-containing protein | - |
| LVJ88_RS08755 (LVJ88_08755) | 1895692..1896090 | + | 399 | WP_233127581.1 | hypothetical protein | - |
| LVJ88_RS08760 (LVJ88_08760) | 1896710..1896976 | + | 267 | WP_085356730.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LVJ88_RS08765 (LVJ88_08765) | 1897014..1897409 | + | 396 | WP_085418462.1 | helix-turn-helix transcriptional regulator | - |
| LVJ88_RS08770 (LVJ88_08770) | 1897779..1899077 | - | 1299 | WP_085418461.1 | adenylosuccinate synthase | - |
| LVJ88_RS08775 (LVJ88_08775) | 1899081..1900247 | - | 1167 | WP_085418460.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| LVJ88_RS08780 (LVJ88_08780) | 1900510..1901679 | - | 1170 | WP_085418459.1 | alpha-hydroxy acid oxidase | - |
| LVJ88_RS08785 (LVJ88_08785) | 1901969..1902412 | + | 444 | WP_054600297.1 | Fe-S cluster assembly transcriptional regulator IscR | - |
| LVJ88_RS08790 (LVJ88_08790) | 1902448..1903662 | + | 1215 | WP_054600298.1 | IscS subfamily cysteine desulfurase | - |
| LVJ88_RS08795 (LVJ88_08795) | 1903771..1904016 | + | 246 | WP_085356725.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LVJ88_RS08800 (LVJ88_08800) | 1904020..1904415 | + | 396 | WP_085418458.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LVJ88_RS08805 (LVJ88_08805) | 1904542..1904928 | + | 387 | WP_085418457.1 | Fe-S cluster assembly scaffold IscU | - |
| LVJ88_RS08810 (LVJ88_08810) | 1904994..1905215 | + | 222 | Protein_1722 | TraR/DksA C4-type zinc finger protein | - |
| LVJ88_RS08815 (LVJ88_08815) | 1905577..1905813 | + | 237 | WP_085418456.1 | recombinase RecA | - |
| LVJ88_RS08820 (LVJ88_08820) | 1905954..1906274 | + | 321 | WP_054600303.1 | iron-sulfur cluster assembly protein IscA | - |
| LVJ88_RS08825 (LVJ88_08825) | 1906383..1906919 | + | 537 | WP_085356722.1 | inorganic diphosphatase | - |
| LVJ88_RS08830 (LVJ88_08830) | 1907170..1907523 | - | 354 | WP_085356721.1 | helix-turn-helix domain-containing protein | - |
| LVJ88_RS08835 (LVJ88_08835) | 1907719..1907955 | + | 237 | WP_085356720.1 | DUF896 domain-containing protein | - |
| LVJ88_RS08840 (LVJ88_08840) | 1908005..1908880 | + | 876 | WP_085418455.1 | pirin family protein | - |
| LVJ88_RS08845 (LVJ88_08845) | 1909171..1909317 | - | 147 | WP_082403052.1 | FeoB-associated Cys-rich membrane protein | - |
| LVJ88_RS08850 (LVJ88_08850) | 1909317..1911194 | - | 1878 | WP_085418454.1 | Fe(2+) transporter FeoB | VF |
| LVJ88_RS08855 (LVJ88_08855) | 1911283..1911555 | - | 273 | WP_054600308.1 | FeoA family protein | - |
| LVJ88_RS08860 (LVJ88_08860) | 1912222..1912962 | - | 741 | WP_085418453.1 | toxin-antitoxin system YwqK family antitoxin | - |
| LVJ88_RS08865 (LVJ88_08865) | 1912964..1914313 | - | 1350 | WP_085356742.1 | aldehyde dehydrogenase family protein | - |
| LVJ88_RS08870 (LVJ88_08870) | 1914711..1915661 | - | 951 | WP_085418452.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| LVJ88_RS08875 (LVJ88_08875) | 1915790..1916683 | - | 894 | WP_054600311.1 | acetylglutamate kinase | - |
| LVJ88_RS08880 (LVJ88_08880) | 1916842..1917807 | + | 966 | WP_085418451.1 | tRNA-dihydrouridine synthase | - |
| LVJ88_RS08885 (LVJ88_08885) | 1917941..1919155 | + | 1215 | WP_085418450.1 | multifunctional CCA addition/repair protein | - |
| LVJ88_RS08890 (LVJ88_08890) | 1919389..1920003 | + | 615 | WP_085359859.1 | riboflavin synthase subunit alpha | - |
| LVJ88_RS08895 (LVJ88_08895) | 1920003..1920623 | + | 621 | WP_233127579.1 | uracil-DNA glycosylase family protein | - |
| LVJ88_RS08900 (LVJ88_08900) | 1920735..1921484 | + | 750 | WP_085418449.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| LVJ88_RS08905 (LVJ88_08905) | 1921800..1922228 | + | 429 | WP_085418448.1 | NfeD family protein | - |
| LVJ88_RS08910 (LVJ88_08910) | 1922238..1923203 | + | 966 | WP_054600317.1 | SPFH domain-containing protein | - |
| LVJ88_RS08915 (LVJ88_08915) | 1923409..1924701 | + | 1293 | WP_244694143.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| LVJ88_RS08920 (LVJ88_08920) | 1924844..1925611 | + | 768 | WP_085418446.1 | endonuclease/exonuclease/phosphatase family protein | - |
| LVJ88_RS08925 (LVJ88_08925) | 1925697..1926173 | - | 477 | WP_054600320.1 | transcription elongation factor GreA | - |
| LVJ88_RS08930 (LVJ88_08930) | 1926401..1927894 | - | 1494 | WP_085418445.1 | patatin-like phospholipase family protein | - |
| LVJ88_RS08935 (LVJ88_08935) | 1927952..1928575 | - | 624 | WP_085356709.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| LVJ88_RS08940 (LVJ88_08940) | 1928637..1928990 | + | 354 | WP_085418444.1 | dihydroneopterin aldolase | - |
| LVJ88_RS08945 (LVJ88_08945) | 1929077..1929697 | + | 621 | WP_085418443.1 | flavin prenyltransferase UbiX | - |
| LVJ88_RS08950 (LVJ88_08950) | 1929982..1930488 | + | 507 | WP_085418442.1 | hypothetical protein | - |
| LVJ88_RS08955 (LVJ88_08955) | 1930977..1932260 | + | 1284 | WP_085418441.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| LVJ88_RS08960 (LVJ88_08960) | 1932502..1934040 | - | 1539 | WP_085418440.1 | hypothetical protein | VF |
| LVJ88_RS08965 (LVJ88_08965) | 1934078..1934578 | - | 501 | WP_054599929.1 | hypothetical protein | VF |
| LVJ88_RS08970 (LVJ88_08970) | 1934735..1936138 | + | 1404 | WP_233127577.1 | hypothetical protein | VF |
| LVJ88_RS08975 (LVJ88_08975) | 1936156..1936815 | + | 660 | WP_085418438.1 | hypothetical protein | VF |
| LVJ88_RS08980 (LVJ88_08980) | 1936829..1938487 | + | 1659 | WP_085418437.1 | Outer membrane porin F | VF |
| LVJ88_RS08985 (LVJ88_08985) | 1938640..1939128 | + | 489 | WP_085356701.1 | Major exported protein | VF |
| LVJ88_RS08990 (LVJ88_08990) | 1939190..1941964 | + | 2775 | WP_085418436.1 | Protein ClpV1 | VF |
| LVJ88_RS08995 (LVJ88_08995) | 1942352..1942858 | + | 507 | WP_054599935.1 | S-ribosylhomocysteine lyase | VF |
| LVJ88_RS09000 (LVJ88_09000) | 1943324..1943800 | + | 477 | WP_085418435.1 | hypothetical protein | - |
| LVJ88_RS09005 (LVJ88_09005) | 1943959..1944798 | + | 840 | WP_085418434.1 | hypothetical protein | - |
| LVJ88_RS09010 (LVJ88_09010) | 1945035..1945475 | - | 441 | WP_085418473.1 | ribonuclease HI | - |
| LVJ88_RS09015 (LVJ88_09015) | 1945578..1945949 | - | 372 | WP_054599965.1 | VanZ family protein | - |
| LVJ88_RS09020 (LVJ88_09020) | 1945952..1946155 | - | 204 | WP_085359887.1 | dioxygenase | - |
| LVJ88_RS09025 (LVJ88_09025) | 1947039..1948367 | - | 1329 | WP_085418433.1 | DUF3482 domain-containing protein | - |
| LVJ88_RS09030 (LVJ88_09030) | 1948832..1949086 | - | 255 | WP_004282923.1 | hypothetical protein | VF |
| LVJ88_RS09035 (LVJ88_09035) | 1949371..1949622 | + | 252 | WP_125940155.1 | hypothetical protein | - |
| LVJ88_RS09040 (LVJ88_09040) | 1949682..1951028 | - | 1347 | WP_198941577.1 | DUF2868 domain-containing protein | - |
| LVJ88_RS09045 (LVJ88_09045) | 1951720..1952334 | + | 615 | WP_233127575.1 | lytic transglycosylase domain-containing protein | - |
| LVJ88_RS09050 (LVJ88_09050) | 1952396..1952716 | + | 321 | WP_085419036.1 | hypothetical protein | - |
| LVJ88_RS09055 (LVJ88_09055) | 1952728..1953159 | + | 432 | WP_085419037.1 | VirB3 family type IV secretion system protein | - |
| LVJ88_RS09060 (LVJ88_09060) | 1953071..1955458 | + | 2388 | WP_244694144.1 | Type IV secretion system protein virB4 | VF |
| LVJ88_RS09065 (LVJ88_09065) | 1955596..1956573 | + | 978 | WP_244694145.1 | IS30 family transposase IS1655 | Transposase |
| LVJ88_RS09070 (LVJ88_09070) | 1956645..1957313 | + | 669 | WP_244694146.1 | Type IV secretion system protein virB5 | VF |
| LVJ88_RS09075 (LVJ88_09075) | 1957334..1957540 | + | 207 | WP_085419027.1 | conjugal transfer protein TraH | - |
| LVJ88_RS09080 (LVJ88_09080) | 1957599..1958579 | + | 981 | WP_085358504.1 | type IV secretion system protein | - |
| LVJ88_RS09085 (LVJ88_09085) | 1958603..1959064 | + | 462 | WP_085419028.1 | cytochrome C oxidase subunit III | - |
| LVJ88_RS09090 (LVJ88_09090) | 1959085..1959249 | + | 165 | WP_085390655.1 | pesticidal protein Cry5Aa | - |
| LVJ88_RS09095 (LVJ88_09095) | 1959323..1959442 | + | 120 | WP_158087730.1 | lipoprotein | - |
| LVJ88_RS09100 (LVJ88_09100) | 1959442..1960185 | + | 744 | WP_180384088.1 | Type IV secretion system protein virB8 | VF |
| LVJ88_RS09105 (LVJ88_09105) | 1960182..1961021 | + | 840 | WP_085358498.1 | Type IV secretion system protein virB9 | VF |
| LVJ88_RS09110 (LVJ88_09110) | 1961018..1961260 | + | 243 | WP_085419071.1 | hypothetical protein | - |
| LVJ88_RS09115 (LVJ88_09115) | 1961263..1961916 | - | 654 | WP_244694147.1 | IS1595 family transposase ISNwa2 | Transposase |
| LVJ88_RS09120 (LVJ88_09120) | 1961931..1962947 | + | 1017 | WP_244694148.1 | Type IV secretion system protein virB10 | VF |
| LVJ88_RS09125 (LVJ88_09125) | 1963017..1964111 | + | 1095 | WP_085358494.1 | Type IV secretion system protein VirB11 | VF |
| LVJ88_RS09130 (LVJ88_09130) | 1964150..1964476 | + | 327 | WP_085358492.1 | hypothetical protein | - |
| LVJ88_RS09135 (LVJ88_09135) | 1964525..1964854 | + | 330 | WP_085419019.1 | hypothetical protein | - |
| LVJ88_RS09140 (LVJ88_09140) | 1964872..1965267 | + | 396 | WP_085419020.1 | single-stranded DNA-binding protein | - |
| LVJ88_RS09145 (LVJ88_09145) | 1965329..1967374 | + | 2046 | WP_085419021.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LVJ88_RS09150 (LVJ88_09150) | 1967432..1968073 | + | 642 | WP_085419022.1 | hypothetical protein | - |
| LVJ88_RS09155 (LVJ88_09155) | 1968215..1971232 | + | 3018 | WP_244694149.1 | PriCT-2 domain-containing protein | - |
| LVJ88_RS09160 (LVJ88_09160) | 1971346..1971546 | + | 201 | WP_004285818.1 | hypothetical protein | - |
| LVJ88_RS09165 (LVJ88_09165) | 1971533..1971808 | + | 276 | WP_004285819.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LVJ88_RS09170 (LVJ88_09170) | 1971924..1972862 | + | 939 | WP_085418976.1 | hypothetical protein | - |
| LVJ88_RS09175 (LVJ88_09175) | 1972931..1973476 | + | 546 | WP_050809989.1 | plasmid mobilization relaxosome protein MobC | - |
| LVJ88_RS09180 (LVJ88_09180) | 1973492..1974559 | + | 1068 | WP_085418977.1 | traS protein | - |
| LVJ88_RS09185 (LVJ88_09185) | 1974739..1975023 | + | 285 | WP_125940247.1 | hypothetical protein | - |
| LVJ88_RS09190 (LVJ88_09190) | 1975085..1975387 | + | 303 | WP_107873936.1 | hypothetical protein | - |
| LVJ88_RS09195 (LVJ88_09195) | 1975454..1976185 | + | 732 | WP_233127655.1 | site-specific DNA-methyltransferase | - |
| LVJ88_RS09200 (LVJ88_09200) | 1976587..1977006 | + | 420 | WP_085418978.1 | hypothetical protein | - |
| LVJ88_RS09205 (LVJ88_09205) | 1976980..1977975 | - | 996 | WP_085418979.1 | hypothetical protein | - |
| LVJ88_RS09210 (LVJ88_09210) | 1978055..1978672 | - | 618 | WP_054617425.1 | bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH | - |
| LVJ88_RS09215 (LVJ88_09215) | 1978699..1979316 | - | 618 | WP_085418980.1 | LysE family transporter | - |
| LVJ88_RS09220 (LVJ88_09220) | 1979320..1980078 | - | 759 | WP_158087952.1 | 2OG-Fe dioxygenase family protein | - |
| LVJ88_RS09225 (LVJ88_09225) | 1980183..1981040 | + | 858 | WP_085418982.1 | LysR family transcriptional regulator | - |
| LVJ88_RS09230 (LVJ88_09230) | 1981303..1981842 | - | 540 | WP_085419050.1 | hypothetical protein | - |
| LVJ88_RS09235 (LVJ88_09235) | 1981833..1982303 | - | 471 | WP_085419051.1 | hypothetical protein | - |
| LVJ88_RS09240 (LVJ88_09240) | 1982326..1983108 | - | 783 | WP_085419052.1 | N-6 DNA methylase | - |
| LVJ88_RS09245 (LVJ88_09245) | 1983173..1983574 | - | 402 | WP_244694150.1 | phosphoglycerate kinase | - |
| LVJ88_RS09250 (LVJ88_09250) | 1984195..1984605 | + | 411 | WP_143773696.1 | hypothetical protein | - |
| LVJ88_RS09255 (LVJ88_09255) | 1984709..1984969 | - | 261 | WP_085419045.1 | Txe/YoeB family addiction module toxin | - |
| LVJ88_RS09260 (LVJ88_09260) | 1984966..1985214 | - | 249 | WP_085360212.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| LVJ88_RS09265 (LVJ88_09265) | 1985332..1985736 | - | 405 | WP_085419044.1 | type II toxin-antitoxin system VapC family toxin | - |
| LVJ88_RS09270 (LVJ88_09270) | 1985733..1986014 | - | 282 | WP_085419043.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LVJ88_RS09275 (LVJ88_09275) | 1986196..1986543 | - | 348 | WP_054600261.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LVJ88_RS09280 (LVJ88_09280) | 1986540..1986782 | - | 243 | WP_244694151.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LVJ88_RS09285 (LVJ88_09285) | 1987299..1988096 | - | 798 | WP_244694152.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|