MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 95164 bp
Accession: NZ_CP091456 Location: 2284324..2379487 Organism: Avibacterium sp. 20-132 Replicon: chromosome
Accession: NZ_CP091456 Location: 2284324..2379487 Organism: Avibacterium sp. 20-132 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L4F93_RS10900 (L4F93_10900) | 2280262..2281665 | + | 1404 | WP_250350265.1 | asparagine--tRNA ligase | - |
| L4F93_RS10905 (L4F93_10905) | 2281796..2282073 | + | 278 | Protein_2109 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L4F93_RS10910 (L4F93_10910) | 2282083..2282373 | + | 291 | WP_250350266.1 | HigA family addiction module antitoxin | - |
| L4F93_RS10915 (L4F93_10915) | 2282575..2284611 | - | 2037 | WP_250350267.1 | exodeoxyribonuclease V subunit alpha | - |
| L4F93_RS10920 (L4F93_10920) | 2284611..2288234 | - | 3624 | WP_250351690.1 | exodeoxyribonuclease V subunit beta | - |
| L4F93_RS10925 (L4F93_10925) | 2288241..2288597 | - | 357 | WP_250350268.1 | DsrE family protein | - |
| L4F93_RS10930 (L4F93_10930) | 2288757..2291219 | - | 2463 | WP_250350269.1 | glycogen/starch/alpha-glucan phosphorylase | - |
| L4F93_RS10935 (L4F93_10935) | 2291352..2292785 | - | 1434 | WP_250350270.1 | glycogen synthase GlgA | - |
| L4F93_RS10940 (L4F93_10940) | 2292860..2294167 | - | 1308 | WP_250350271.1 | glucose-1-phosphate adenylyltransferase | - |
| L4F93_RS10945 (L4F93_10945) | 2294199..2296202 | - | 2004 | WP_250350272.1 | glycogen debranching protein GlgX | - |
| L4F93_RS10950 (L4F93_10950) | 2296259..2298541 | - | 2283 | WP_250350273.1 | 1,4-alpha-glucan branching protein GlgB | - |
| L4F93_RS10955 (L4F93_10955) | 2298551..2300647 | - | 2097 | WP_250351691.1 | 4-alpha-glucanotransferase | - |
| L4F93_RS10960 (L4F93_10960) | 2300898..2301194 | + | 297 | WP_250350274.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L4F93_RS10965 (L4F93_10965) | 2301198..2301488 | + | 291 | WP_250350275.1 | putative addiction module antidote protein | Antitoxin Detail |
| L4F93_RS10970 (L4F93_10970) | 2301516..2301962 | - | 447 | WP_250350276.1 | YcgN family cysteine cluster protein | - |
| L4F93_RS10975 (L4F93_10975) | 2302139..2302801 | + | 663 | WP_250350277.1 | Bax inhibitor-1 family protein | - |
| L4F93_RS10980 (L4F93_10980) | 2302883..2303212 | + | 330 | WP_250350278.1 | TusE/DsrC/DsvC family sulfur relay protein | - |
| L4F93_RS10985 (L4F93_10985) | 2303307..2304176 | + | 870 | WP_250351692.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| L4F93_RS10990 (L4F93_10990) | 2304166..2305083 | + | 918 | WP_250350279.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| L4F93_RS10995 (L4F93_10995) | 2305080..2305931 | + | 852 | WP_250350280.1 | metal ABC transporter permease | - |
| L4F93_RS11000 (L4F93_11000) | 2305931..2306767 | + | 837 | WP_250350281.1 | metal ABC transporter permease | - |
| L4F93_RS11005 (L4F93_11005) | 2306885..2307160 | - | 276 | WP_250350282.1 | acylphosphatase | - |
| L4F93_RS11010 (L4F93_11010) | 2307334..2307993 | + | 660 | WP_250350283.1 | DUF2057 domain-containing protein | - |
| L4F93_RS11015 (L4F93_11015) | 2308055..2308513 | + | 459 | WP_250350284.1 | methylglyoxal synthase | - |
| L4F93_RS11020 (L4F93_11020) | 2308551..2310704 | + | 2154 | WP_250351693.1 | YccS family putative transporter | - |
| L4F93_RS11025 (L4F93_11025) | 2310772..2310981 | - | 210 | WP_103852945.1 | cold shock domain-containing protein CspD | - |
| L4F93_RS11030 (L4F93_11030) | 2311215..2311388 | - | 174 | WP_250350285.1 | YoaH family protein | - |
| L4F93_RS11035 (L4F93_11035) | 2311465..2312469 | + | 1005 | WP_250350286.1 | Ornithine carbamoyltransferase, catabolic | VF |
| L4F93_RS11040 (L4F93_11040) | 2312525..2313883 | - | 1359 | WP_250350287.1 | bifunctional tetrahydrofolate synthase/dihydrofolate synthase | - |
| L4F93_RS11045 (L4F93_11045) | 2313876..2314775 | - | 900 | WP_250350288.1 | acetyl-CoA carboxylase, carboxyltransferase subunit beta | - |
| L4F93_RS11050 (L4F93_11050) | 2314849..2315640 | - | 792 | WP_250350289.1 | tRNA pseudouridine(38-40) synthase TruA | - |
| L4F93_RS11055 (L4F93_11055) | 2315642..2316406 | - | 765 | WP_250350290.1 | glycosyltransferase family A protein | - |
| L4F93_RS11060 (L4F93_11060) | 2316518..2317360 | + | 843 | WP_250350291.1 | hypothetical protein | VF |
| L4F93_RS11065 (L4F93_11065) | 2317380..2317883 | - | 504 | WP_250351694.1 | endonuclease SmrB | - |
| L4F93_RS11070 (L4F93_11070) | 2318164..2318736 | - | 573 | WP_250350292.1 | UbiX family flavin prenyltransferase | - |
| L4F93_RS11075 (L4F93_11075) | 2318736..2320247 | - | 1512 | WP_250350293.1 | amidophosphoribosyltransferase | - |
| L4F93_RS11080 (L4F93_11080) | 2320260..2320760 | - | 501 | WP_250350294.1 | CvpA family protein | - |
| L4F93_RS11085 (L4F93_11085) | 2320925..2321365 | - | 441 | WP_250350295.1 | terminus macrodomain insulation protein YfbV | - |
| L4F93_RS11090 (L4F93_11090) | 2321623..2322825 | + | 1203 | WP_250350296.1 | acetate kinase | - |
| L4F93_RS11095 (L4F93_11095) | 2322891..2325029 | + | 2139 | WP_250350297.1 | phosphate acetyltransferase | - |
| L4F93_RS11100 (L4F93_11100) | 2325397..2326032 | + | 636 | WP_250350298.1 | histone | - |
| L4F93_RS11110 (L4F93_11110) | 2326590..2326856 | - | 267 | WP_250350299.1 | DUF1353 domain-containing protein | - |
| L4F93_RS11115 (L4F93_11115) | 2326905..2327978 | - | 1074 | WP_250349882.1 | ISNCY family transposase KIS | Transposase |
| L4F93_RS11120 (L4F93_11120) | 2327990..2328316 | - | 327 | WP_250349881.1 | hypothetical protein | - |
| L4F93_RS11125 (L4F93_11125) | 2328319..2328645 | - | 327 | WP_250349880.1 | hypothetical protein | - |
| L4F93_RS11130 (L4F93_11130) | 2328707..2334079 | - | 5373 | WP_250349879.1 | ISNCY family transposase KIS | Transposase |
| L4F93_RS11135 (L4F93_11135) | 2334109..2334717 | - | 609 | WP_250350300.1 | tail assembly protein | - |
| L4F93_RS11140 (L4F93_11140) | 2334660..2335403 | - | 744 | WP_250350301.1 | C40 family peptidase | - |
| L4F93_RS11145 (L4F93_11145) | 2335465..2335743 | + | 279 | WP_250351695.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L4F93_RS11150 (L4F93_11150) | 2335754..2336059 | + | 306 | WP_250350302.1 | HigA family addiction module antitoxin | - |
| L4F93_RS11155 (L4F93_11155) | 2336056..2336769 | - | 714 | WP_250350303.1 | phage minor tail protein L | - |
| L4F93_RS11160 (L4F93_11160) | 2336827..2337105 | - | 279 | WP_250350304.1 | hypothetical protein | - |
| L4F93_RS11165 (L4F93_11165) | 2337152..2337454 | - | 303 | WP_250350305.1 | XRE family transcriptional regulator | Antitoxin Detail |
| L4F93_RS11170 (L4F93_11170) | 2337459..2337821 | - | 363 | WP_250350306.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L4F93_RS11175 (L4F93_11175) | 2337933..2338763 | - | 831 | WP_250350307.1 | phage antirepressor N-terminal domain-containing protein | - |
| L4F93_RS11180 (L4F93_11180) | 2339305..2339658 | - | 354 | WP_250350308.1 | hypothetical protein | - |
| L4F93_RS11185 (L4F93_11185) | 2339669..2340097 | - | 429 | WP_250350309.1 | hypothetical protein | - |
| L4F93_RS11190 (L4F93_11190) | 2340232..2340369 | - | 138 | WP_165381770.1 | hypothetical protein | - |
| L4F93_RS11195 (L4F93_11195) | 2340550..2341068 | - | 519 | WP_250350310.1 | phage antirepressor N-terminal domain-containing protein | - |
| L4F93_RS11200 (L4F93_11200) | 2341217..2344426 | - | 3210 | WP_250350311.1 | tape measure protein | - |
| L4F93_RS11205 (L4F93_11205) | 2344436..2344762 | - | 327 | WP_250350312.1 | phage tail protein | - |
| L4F93_RS11210 (L4F93_11210) | 2344795..2345055 | - | 261 | WP_250350313.1 | hypothetical protein | - |
| L4F93_RS11215 (L4F93_11215) | 2345142..2345537 | - | 396 | WP_250350314.1 | hypothetical protein | - |
| L4F93_RS11220 (L4F93_11220) | 2345611..2346624 | - | 1014 | WP_250350315.1 | phage tail tube protein | - |
| L4F93_RS11225 (L4F93_11225) | 2346634..2347026 | - | 393 | WP_250350316.1 | phage tail terminator-like protein | - |
| L4F93_RS11230 (L4F93_11230) | 2347027..2347419 | - | 393 | WP_250350317.1 | HK97 gp10 family phage protein | - |
| L4F93_RS11235 (L4F93_11235) | 2347420..2347812 | - | 393 | WP_250350318.1 | hypothetical protein | - |
| L4F93_RS11240 (L4F93_11240) | 2347814..2348266 | - | 453 | WP_250350319.1 | hypothetical protein | - |
| L4F93_RS11245 (L4F93_11245) | 2348276..2348527 | - | 252 | WP_250350320.1 | HeH/LEM domain-containing protein | - |
| L4F93_RS11250 (L4F93_11250) | 2348578..2349540 | - | 963 | WP_250350321.1 | major capsid protein | - |
| L4F93_RS11255 (L4F93_11255) | 2349549..2350328 | - | 780 | WP_250350322.1 | hypothetical protein | - |
| L4F93_RS11260 (L4F93_11260) | 2350464..2350883 | - | 420 | WP_250350323.1 | Bifunctional (p)ppGpp synthase/hydrolase RelA | VF |
| L4F93_RS11265 (L4F93_11265) | 2350883..2351101 | - | 219 | WP_250350324.1 | hypothetical protein | - |
| L4F93_RS11270 (L4F93_11270) | 2351101..2352732 | - | 1632 | WP_250350325.1 | minor capsid protein | - |
| L4F93_RS11275 (L4F93_11275) | 2352716..2354092 | - | 1377 | WP_250350326.1 | DUF4055 domain-containing protein | - |
| L4F93_RS11280 (L4F93_11280) | 2354102..2355337 | - | 1236 | WP_250350327.1 | phage terminase large subunit | - |
| L4F93_RS11285 (L4F93_11285) | 2355306..2355842 | - | 537 | WP_250350328.1 | terminase small subunit | - |
| L4F93_RS11290 (L4F93_11290) | 2355858..2356121 | - | 264 | WP_250350329.1 | hypothetical protein | - |
| L4F93_RS11295 (L4F93_11295) | 2356152..2356406 | - | 255 | WP_250350330.1 | hypothetical protein | - |
| L4F93_RS11300 (L4F93_11300) | 2356390..2356608 | - | 219 | WP_250350331.1 | hypothetical protein | - |
| L4F93_RS11305 (L4F93_11305) | 2356583..2356915 | - | 333 | WP_250350332.1 | DUF2570 family protein | - |
| L4F93_RS11310 (L4F93_11310) | 2356888..2357409 | - | 522 | WP_250350333.1 | lysozyme | - |
| L4F93_RS11315 (L4F93_11315) | 2357406..2357651 | - | 246 | WP_250350334.1 | hypothetical protein | - |
| L4F93_RS11320 (L4F93_11320) | 2357997..2358275 | - | 279 | WP_250350335.1 | hypothetical protein | - |
| L4F93_RS11325 (L4F93_11325) | 2358444..2358962 | - | 519 | WP_250350336.1 | antiterminator Q family protein | - |
| L4F93_RS11330 (L4F93_11330) | 2358968..2359564 | - | 597 | WP_250350337.1 | recombination protein NinG | - |
| L4F93_RS11335 (L4F93_11335) | 2359869..2360534 | + | 666 | WP_250350338.1 | BRO family protein | - |
| L4F93_RS11340 (L4F93_11340) | 2360600..2360836 | + | 237 | WP_250350339.1 | hypothetical protein | - |
| L4F93_RS11345 (L4F93_11345) | 2360946..2361371 | - | 426 | WP_250350340.1 | recombination protein NinB | - |
| L4F93_RS11350 (L4F93_11350) | 2361361..2361579 | - | 219 | WP_250350341.1 | hypothetical protein | - |
| L4F93_RS11355 (L4F93_11355) | 2361576..2362265 | - | 690 | WP_250350342.1 | replication protein P | - |
| L4F93_RS11360 (L4F93_11360) | 2362262..2363125 | - | 864 | WP_250350343.1 | replication protein | - |
| L4F93_RS11365 (L4F93_11365) | 2363122..2363376 | - | 255 | WP_250350344.1 | helix-turn-helix domain-containing protein | - |
| L4F93_RS11370 (L4F93_11370) | 2363405..2363866 | - | 462 | WP_250350345.1 | hypothetical protein | - |
| L4F93_RS11375 (L4F93_11375) | 2363915..2364115 | - | 201 | WP_250350346.1 | YdaS family helix-turn-helix protein | - |
| L4F93_RS11380 (L4F93_11380) | 2364233..2364913 | + | 681 | WP_250350347.1 | S24 family peptidase | - |
| L4F93_RS11385 (L4F93_11385) | 2364938..2365879 | + | 942 | WP_250350348.1 | hypothetical protein | - |
| L4F93_RS11390 (L4F93_11390) | 2365882..2366412 | + | 531 | WP_250350349.1 | hypothetical protein | - |
| L4F93_RS11395 (L4F93_11395) | 2366797..2367069 | + | 273 | WP_250350350.1 | hypothetical protein | - |
| L4F93_RS11400 (L4F93_11400) | 2367348..2367665 | + | 318 | WP_250350351.1 | hypothetical protein | - |
| L4F93_RS11405 (L4F93_11405) | 2367677..2368144 | + | 468 | WP_250350352.1 | hypothetical protein | - |
| L4F93_RS11410 (L4F93_11410) | 2368583..2369548 | + | 966 | WP_250350353.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| L4F93_RS11415 (L4F93_11415) | 2369548..2370234 | + | 687 | WP_250350354.1 | hypothetical protein | - |
| L4F93_RS11420 (L4F93_11420) | 2370374..2370811 | + | 438 | WP_250350355.1 | DUF4065 domain-containing protein | - |
| L4F93_RS11425 (L4F93_11425) | 2370808..2371185 | + | 378 | WP_250350356.1 | hypothetical protein | - |
| L4F93_RS11430 (L4F93_11430) | 2371507..2372145 | + | 639 | WP_250350357.1 | Bro-N domain-containing protein | - |
| L4F93_RS11435 (L4F93_11435) | 2372238..2372510 | + | 273 | WP_250350358.1 | hypothetical protein | - |
| L4F93_RS11440 (L4F93_11440) | 2372503..2372724 | + | 222 | WP_250350359.1 | hypothetical protein | - |
| L4F93_RS11445 (L4F93_11445) | 2372734..2372904 | + | 171 | WP_250350360.1 | hypothetical protein | - |
| L4F93_RS11450 (L4F93_11450) | 2372905..2373861 | + | 957 | WP_250350361.1 | hypothetical protein | - |
| L4F93_RS11455 (L4F93_11455) | 2373956..2374324 | + | 369 | WP_250350362.1 | hypothetical protein | - |
| L4F93_RS11460 (L4F93_11460) | 2374314..2374640 | + | 327 | WP_194752223.1 | hypothetical protein | - |
| L4F93_RS11465 (L4F93_11465) | 2374754..2375779 | + | 1026 | WP_250350363.1 | hypothetical protein | - |
| L4F93_RS11470 (L4F93_11470) | 2376025..2376138 | + | 114 | Protein_2221 | bacteriocin | - |
| L4F93_RS11475 (L4F93_11475) | 2376413..2377039 | + | 627 | WP_250350364.1 | KilA-N domain-containing protein | - |
| L4F93_RS12420 | 2377126..2377248 | + | 123 | WP_265748262.1 | hypothetical protein | - |
| L4F93_RS11480 (L4F93_11480) | 2377250..2378038 | + | 789 | WP_250350365.1 | phage recombination protein Bet | - |
| L4F93_RS11485 (L4F93_11485) | 2378035..2378646 | + | 612 | WP_250350366.1 | YqaJ viral recombinase family protein | - |
| L4F93_RS11490 (L4F93_11490) | 2378728..2379054 | + | 327 | WP_250350367.1 | DUF6378 domain-containing protein | - |
| L4F93_RS11495 (L4F93_11495) | 2379038..2379625 | + | 588 | WP_250350368.1 | hypothetical protein | - |
| L4F93_RS11500 (L4F93_11500) | 2379760..2380341 | + | 582 | WP_250350369.1 | SAM-dependent DNA methyltransferase | - |
| L4F93_RS11505 (L4F93_11505) | 2380359..2380592 | + | 234 | WP_250350370.1 | excisionase | - |
| L4F93_RS11510 (L4F93_11510) | 2380559..2381686 | + | 1128 | WP_250350371.1 | site-specific integrase | - |
| L4F93_RS11515 (L4F93_11515) | 2382079..2383737 | - | 1659 | WP_250350372.1 | glutamine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|