MGE detailed information
MGE type: IScluster/Tn MGE length: 19767 bp
Accession: NZ_CP091143 Location: 4589561..4609327 Organism: Pseudomonas avellanae strain NCPPB 3491 Replicon: chromosome
Accession: NZ_CP091143 Location: 4589561..4609327 Organism: Pseudomonas avellanae strain NCPPB 3491 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Y00_RS20765 (L2Y00_20765) | 4585580..4586347 | + | 768 | WP_005613581.1 | DeoR family transcriptional regulator | - |
| L2Y00_RS20770 (L2Y00_20770) | 4586357..4588192 | + | 1836 | WP_005613583.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| L2Y00_RS20775 (L2Y00_20775) | 4588468..4589202 | + | 735 | WP_268240035.1 | TniQ family protein | - |
| L2Y00_RS20780 (L2Y00_20780) | 4589225..4590292 | + | 1068 | WP_249740216.1 | IS630 family transposase ISPsy32 | Transposase |
| L2Y00_RS20785 (L2Y00_20785) | 4590501..4591517 | + | 1017 | WP_005614760.1 | IS30 family transposase ISPsy38 | Transposase |
| L2Y00_RS20790 (L2Y00_20790) | 4591847..4592860 | - | 1014 | WP_229687612.1 | TnsD family Tn7-like transposition protein | - |
| L2Y00_RS29920 | 4592987..4593340 | - | 354 | Protein_4121 | TniQ family protein | - |
| L2Y00_RS20800 (L2Y00_20800) | 4593345..4594361 | - | 1017 | WP_005614760.1 | IS30 family transposase ISPsy38 | Transposase |
| L2Y00_RS20805 (L2Y00_20805) | 4594396..4594587 | - | 192 | WP_081591312.1 | hypothetical protein | - |
| L2Y00_RS20810 (L2Y00_20810) | 4595121..4595924 | - | 804 | WP_003417182.1 | IS21 family transposase ISPsy20 | Transposase |
| L2Y00_RS20815 (L2Y00_20815) | 4595917..4597416 | - | 1500 | WP_249740206.1 | IS21 family transposase ISPsy20 | Transposase |
| L2Y00_RS20820 (L2Y00_20820) | 4597532..4597930 | - | 399 | Protein_4126 | type I restriction endonuclease subunit R | - |
| L2Y00_RS20825 (L2Y00_20825) | 4598005..4598379 | - | 375 | Protein_4127 | IS91 family transposase IS801 | Transposase |
| L2Y00_RS20830 (L2Y00_20830) | 4598699..4599448 | + | 750 | WP_122212308.1 | IS5 family transposase ISPa67 | Transposase |
| L2Y00_RS20835 (L2Y00_20835) | 4599558..4600307 | + | 750 | WP_122212308.1 | IS5 family transposase ISPa67 | Transposase |
| L2Y00_RS20840 (L2Y00_20840) | 4600689..4600871 | + | 183 | WP_007253326.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| L2Y00_RS20845 (L2Y00_20845) | 4600904..4601329 | + | 426 | WP_005622461.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| L2Y00_RS20850 (L2Y00_20850) | 4601633..4601800 | - | 168 | WP_169338176.1 | hypothetical protein | - |
| L2Y00_RS20860 (L2Y00_20860) | 4603938..4604954 | + | 1017 | WP_005615738.1 | IS30 family transposase ISPsy38 | Transposase |
| L2Y00_RS20865 (L2Y00_20865) | 4605030..4605320 | - | 291 | WP_081591740.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L2Y00_RS20870 (L2Y00_20870) | 4605283..4605546 | - | 264 | WP_024421039.1 | ribbon-helix-helix protein, CopG family | - |
| L2Y00_RS20875 (L2Y00_20875) | 4606354..4607421 | - | 1068 | WP_249740217.1 | IS630 family transposase ISPsy32 | Transposase |
| L2Y00_RS20880 (L2Y00_20880) | 4607985..4608248 | - | 264 | WP_010212495.1 | hypothetical protein | - |
| L2Y00_RS20885 (L2Y00_20885) | 4608311..4609327 | + | 1017 | WP_005614760.1 | IS30 family transposase ISPsy38 | Transposase |
| L2Y00_RS20890 (L2Y00_20890) | 4609573..4611495 | + | 1923 | WP_005621980.1 | methyl-accepting chemotaxis protein | - |
| L2Y00_RS20895 (L2Y00_20895) | 4611860..4613614 | + | 1755 | WP_005621977.1 | ABC transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|